RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
HLA-DRA-202ENST00000395388 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
HLA-DRA-202ENST00000395388 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
HLA-DRA-202ENST00000395388 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
HLA-DRA-202ENST00000395388 PXDNQ92626 1479 aa17.21■□□□□ 0.35
HLA-DRA-202ENST00000395388 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
HLA-DRA-202ENST00000395388 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
HLA-DRA-202ENST00000395388 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.34
HLA-DRA-202ENST00000395388 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.34
HLA-DRA-202ENST00000395388 MYOM1P52179 1685 aa17.2■□□□□ 0.34
HLA-DRA-202ENST00000395388 DDX10Q13206 875 aaKnown RBP17.2■□□□□ 0.34
HLA-DRA-202ENST00000395388 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
HLA-DRA-202ENST00000395388 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
HLA-DRA-202ENST00000395388 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
HLA-DRA-202ENST00000395388 NLRP6P59044 892 aa17.18■□□□□ 0.34
HLA-DRA-202ENST00000395388 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
HLA-DRA-202ENST00000395388 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
HLA-DRA-202ENST00000395388 NSD3Q9BZ95 1437 aa17.17■□□□□ 0.34
HLA-DRA-202ENST00000395388 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
HLA-DRA-202ENST00000395388 JCADQ9P266 1359 aa17.16■□□□□ 0.34
HLA-DRA-202ENST00000395388 SSH2Q76I76 1423 aa17.16■□□□□ 0.34
HLA-DRA-202ENST00000395388 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
HLA-DRA-202ENST00000395388 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
HLA-DRA-202ENST00000395388 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
HLA-DRA-202ENST00000395388 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
HLA-DRA-202ENST00000395388 COG3Q96JB2 828 aa17.15■□□□□ 0.34
HLA-DRA-202ENST00000395388 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
HLA-DRA-202ENST00000395388 NME9Q86XW9 330 aa17.14■□□□□ 0.33
HLA-DRA-202ENST00000395388 FYB1O15117 783 aa17.13■□□□□ 0.33
HLA-DRA-202ENST00000395388 PER1O15534 1290 aaPredicted RBP17.13■□□□□ 0.33
HLA-DRA-202ENST00000395388 ILDR1Q86SU0 546 aaPredicted RBP17.13■□□□□ 0.33
HLA-DRA-202ENST00000395388 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
HLA-DRA-202ENST00000395388 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
HLA-DRA-202ENST00000395388 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
HLA-DRA-202ENST00000395388 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
HLA-DRA-202ENST00000395388 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
HLA-DRA-202ENST00000395388 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
HLA-DRA-202ENST00000395388 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
HLA-DRA-202ENST00000395388 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
HLA-DRA-202ENST00000395388 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
HLA-DRA-202ENST00000395388 USP31Q70CQ4 1352 aa17.1■□□□□ 0.33
HLA-DRA-202ENST00000395388 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
HLA-DRA-202ENST00000395388 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
HLA-DRA-202ENST00000395388 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
HLA-DRA-202ENST00000395388 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
HLA-DRA-202ENST00000395388 NSD2O96028 1365 aa17.09■□□□□ 0.33
HLA-DRA-202ENST00000395388 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
HLA-DRA-202ENST00000395388 GCP02774 474 aa17.07■□□□□ 0.32
HLA-DRA-202ENST00000395388 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
HLA-DRA-202ENST00000395388 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
HLA-DRA-202ENST00000395388 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
HLA-DRA-202ENST00000395388 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
HLA-DRA-202ENST00000395388 SOX12O15370 315 aa17.06■□□□□ 0.32
HLA-DRA-202ENST00000395388 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
HLA-DRA-202ENST00000395388 USP19O94966 1318 aa17.05■□□□□ 0.32
HLA-DRA-202ENST00000395388 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
HLA-DRA-202ENST00000395388 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
HLA-DRA-202ENST00000395388 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
HLA-DRA-202ENST00000395388 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
HLA-DRA-202ENST00000395388 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
HLA-DRA-202ENST00000395388 OVOS2A0A0J9YW53 1432 aa17.03■□□□□ 0.32
HLA-DRA-202ENST00000395388 OVOS2Q6IE36 1432 aa17.03■□□□□ 0.32
HLA-DRA-202ENST00000395388 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
HLA-DRA-202ENST00000395388 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
HLA-DRA-202ENST00000395388 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
HLA-DRA-202ENST00000395388 USP54Q70EL1 1684 aa17■□□□□ 0.31
HLA-DRA-202ENST00000395388 SLIT3O75094 1523 aa17■□□□□ 0.31
HLA-DRA-202ENST00000395388 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
HLA-DRA-202ENST00000395388 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
HLA-DRA-202ENST00000395388 ANP32CO43423 234 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 AMPHP49418 695 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 RALBP1Q15311 655 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 ARHGEF25Q86VW2 580 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 C8orf37Q96NL8 207 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
HLA-DRA-202ENST00000395388 CPDO75976 1380 aa16.97■□□□□ 0.31
HLA-DRA-202ENST00000395388 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
HLA-DRA-202ENST00000395388 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
HLA-DRA-202ENST00000395388 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
HLA-DRA-202ENST00000395388 FBLN1P23142 703 aa16.96■□□□□ 0.31
HLA-DRA-202ENST00000395388 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
HLA-DRA-202ENST00000395388 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
HLA-DRA-202ENST00000395388 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.3
HLA-DRA-202ENST00000395388 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.3
HLA-DRA-202ENST00000395388 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
HLA-DRA-202ENST00000395388 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
HLA-DRA-202ENST00000395388 EVA1CP58658 441 aa16.94■□□□□ 0.3
HLA-DRA-202ENST00000395388 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
HLA-DRA-202ENST00000395388 LRP6O75581 1613 aa16.93■□□□□ 0.3
HLA-DRA-202ENST00000395388 NFAT5O94916 1531 aa16.93■□□□□ 0.3
HLA-DRA-202ENST00000395388 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
HLA-DRA-202ENST00000395388 IP6K1Q92551 441 aa16.93■□□□□ 0.3
HLA-DRA-202ENST00000395388 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
HLA-DRA-202ENST00000395388 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
HLA-DRA-202ENST00000395388 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
HLA-DRA-202ENST00000395388 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
HLA-DRA-202ENST00000395388 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
HLA-DRA-202ENST00000395388 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
HLA-DRA-202ENST00000395388 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms