RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 EXOC6Q8TAG9 804 aa14.43□□□□□ -0.1
CASP3-202ENST00000393585 AMOTL2Q9Y2J4 779 aa14.43□□□□□ -0.1
CASP3-202ENST00000393585 U2SURPO15042 1029 aaKnown RBP14.43□□□□□ -0.1
CASP3-202ENST00000393585 NME9Q86XW9 330 aa14.42□□□□□ -0.1
CASP3-202ENST00000393585 WWC1Q8IX03 1113 aa14.42□□□□□ -0.1
CASP3-202ENST00000393585 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
CASP3-202ENST00000393585 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
CASP3-202ENST00000393585 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
CASP3-202ENST00000393585 IQSEC2Q5JU85 1478 aa14.41□□□□□ -0.1
CASP3-202ENST00000393585 TRMT2AQ8IZ69 625 aaKnown RBP14.41□□□□□ -0.1
CASP3-202ENST00000393585 TBX22Q9Y458 520 aa14.41□□□□□ -0.1
CASP3-202ENST00000393585 EDC4Q6P2E9 1401 aaKnown RBP14.41□□□□□ -0.1
CASP3-202ENST00000393585 CDC42BPGQ6DT37 1551 aa14.41□□□□□ -0.1
CASP3-202ENST00000393585 CEP170BQ9Y4F5 1589 aaPredicted RBP14.41□□□□□ -0.1
CASP3-202ENST00000393585 PPM1GO15355 546 aaPredicted RBP14.41□□□□□ -0.1
CASP3-202ENST00000393585 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
CASP3-202ENST00000393585 E9PSI1 815 aa14.4□□□□□ -0.1
CASP3-202ENST00000393585 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
CASP3-202ENST00000393585 ADGRB2O60241 1585 aa14.39□□□□□ -0.11
CASP3-202ENST00000393585 POLKQ9UBT6 870 aa14.38□□□□□ -0.11
CASP3-202ENST00000393585 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
CASP3-202ENST00000393585 DNAJC5Q9H3Z4 198 aa14.38□□□□□ -0.11
CASP3-202ENST00000393585 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
CASP3-202ENST00000393585 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
CASP3-202ENST00000393585 DIAPH1O60610 1272 aaKnown RBP14.37□□□□□ -0.11
CASP3-202ENST00000393585 C20orf194Q5TEA3 1177 aa14.37□□□□□ -0.11
CASP3-202ENST00000393585 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
CASP3-202ENST00000393585 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
CASP3-202ENST00000393585 PNPLA6Q8IY17 1366 aa14.37□□□□□ -0.11
CASP3-202ENST00000393585 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
CASP3-202ENST00000393585 ACEP12821 1306 aa14.36□□□□□ -0.11
CASP3-202ENST00000393585 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 CRBNQ96SW2 442 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 DIP2AQ14689 1571 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 KCNA6P17658 529 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 COG3Q96JB2 828 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
CASP3-202ENST00000393585 ADAMTSL3P82987 1691 aa14.35□□□□□ -0.11
CASP3-202ENST00000393585 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
CASP3-202ENST00000393585 TOPAZ1Q8N9V7 1692 aa14.34□□□□□ -0.11
CASP3-202ENST00000393585 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
CASP3-202ENST00000393585 BCAR3O75815 825 aa14.33□□□□□ -0.11
CASP3-202ENST00000393585 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.11
CASP3-202ENST00000393585 XRN1Q8IZH2 1706 aaKnown RBP14.33□□□□□ -0.12
CASP3-202ENST00000393585 MAPK8IP3Q9UPT6 1336 aa14.33□□□□□ -0.12
CASP3-202ENST00000393585 PLEKHG3A1L390 1219 aa14.32□□□□□ -0.12
CASP3-202ENST00000393585 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
CASP3-202ENST00000393585 TTC21BQ7Z4L5 1316 aa14.32□□□□□ -0.12
CASP3-202ENST00000393585 RBM19Q9Y4C8 960 aaKnown RBP14.32□□□□□ -0.12
CASP3-202ENST00000393585 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
CASP3-202ENST00000393585 ANKLE2Q86XL3 938 aa14.31□□□□□ -0.12
CASP3-202ENST00000393585 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
CASP3-202ENST00000393585 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
CASP3-202ENST00000393585 USP6P35125 1406 aa14.31□□□□□ -0.12
CASP3-202ENST00000393585 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
CASP3-202ENST00000393585 HMOX1P09601 288 aa14.3□□□□□ -0.12
CASP3-202ENST00000393585 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
CASP3-202ENST00000393585 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
CASP3-202ENST00000393585 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
CASP3-202ENST00000393585 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
CASP3-202ENST00000393585 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
CASP3-202ENST00000393585 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
CASP3-202ENST00000393585 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
CASP3-202ENST00000393585 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
CASP3-202ENST00000393585 SETD1BQ9UPS6 1966 aaKnown RBP14.28□□□□□ -0.12
CASP3-202ENST00000393585 SOX12O15370 315 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 PIK3R4Q99570 1358 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 FCHSD2O94868 740 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 IL13P35225 146 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 RIPK4P57078 832 aa14.28□□□□□ -0.12
CASP3-202ENST00000393585 NGDNQ8NEJ9 315 aaKnown RBP14.28□□□□□ -0.12
CASP3-202ENST00000393585 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
CASP3-202ENST00000393585 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.13
CASP3-202ENST00000393585 OVOS2A0A0J9YW53 1432 aa14.26□□□□□ -0.13
CASP3-202ENST00000393585 OVOS2Q6IE36 1432 aa14.26□□□□□ -0.13
CASP3-202ENST00000393585 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
CASP3-202ENST00000393585 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
CASP3-202ENST00000393585 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
CASP3-202ENST00000393585 BCL2L13Q9BXK5 485 aa14.25□□□□□ -0.13
CASP3-202ENST00000393585 SSH2Q76I76 1423 aa14.25□□□□□ -0.13
CASP3-202ENST00000393585 MYT1Q01538 1121 aa14.25□□□□□ -0.13
CASP3-202ENST00000393585 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
CASP3-202ENST00000393585 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
CASP3-202ENST00000393585 RARSP54136 660 aaKnown RBP14.24□□□□□ -0.13
CASP3-202ENST00000393585 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
CASP3-202ENST00000393585 NEFMP07197 916 aa14.23□□□□□ -0.13
CASP3-202ENST00000393585 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
CASP3-202ENST00000393585 NALCNQ8IZF0 1738 aa14.22□□□□□ -0.13
CASP3-202ENST00000393585 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
CASP3-202ENST00000393585 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
CASP3-202ENST00000393585 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
CASP3-202ENST00000393585 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.13
CASP3-202ENST00000393585 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.13
CASP3-202ENST00000393585 ANKARQ7Z5J8 1434 aa14.21□□□□□ -0.13
CASP3-202ENST00000393585 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.14
CASP3-202ENST00000393585 PANK1Q8TE04 598 aa14.21□□□□□ -0.14
CASP3-202ENST00000393585 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
CASP3-202ENST00000393585 NUTM2GQ5VZR2 741 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 917.4 ms