RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NUDT16Q96DE0 195 aaKnown RBP18.59■□□□□ 0.57
MKS1-203ENST00000393120 CDC42BPGQ6DT37 1551 aa18.58■□□□□ 0.57
MKS1-203ENST00000393120 KDM2BQ8NHM5 1336 aa18.58■□□□□ 0.56
MKS1-203ENST00000393120 MYH16Q9H6N6 1097 aa18.58■□□□□ 0.56
MKS1-203ENST00000393120 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
MKS1-203ENST00000393120 LTKP29376 864 aa18.56■□□□□ 0.56
MKS1-203ENST00000393120 CENPQQ7L2Z9 268 aaPredicted RBP18.56■□□□□ 0.56
MKS1-203ENST00000393120 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
MKS1-203ENST00000393120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
MKS1-203ENST00000393120 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
MKS1-203ENST00000393120 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 FCHSD2O94868 740 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
MKS1-203ENST00000393120 MYT1Q01538 1121 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 SLIT1O75093 1534 aa18.55■□□□□ 0.56
MKS1-203ENST00000393120 ARHGAP23Q9P227 1491 aa18.54■□□□□ 0.56
MKS1-203ENST00000393120 IL16Q14005 1332 aa18.54■□□□□ 0.56
MKS1-203ENST00000393120 MSH5O43196 834 aa18.54■□□□□ 0.56
MKS1-203ENST00000393120 RARSP54136 660 aaKnown RBP18.54■□□□□ 0.56
MKS1-203ENST00000393120 EID1Q9Y6B2 187 aa18.54■□□□□ 0.56
MKS1-203ENST00000393120 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
MKS1-203ENST00000393120 MAPK8IP3Q9UPT6 1336 aa18.53■□□□□ 0.56
MKS1-203ENST00000393120 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
MKS1-203ENST00000393120 AAMPQ13685 434 aa18.52■□□□□ 0.56
MKS1-203ENST00000393120 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
MKS1-203ENST00000393120 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
MKS1-203ENST00000393120 C3P01024 1663 aa18.5■□□□□ 0.55
MKS1-203ENST00000393120 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
MKS1-203ENST00000393120 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
MKS1-203ENST00000393120 PLEKHG3A1L390 1219 aa18.49■□□□□ 0.55
MKS1-203ENST00000393120 NME9Q86XW9 330 aa18.49■□□□□ 0.55
MKS1-203ENST00000393120 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
MKS1-203ENST00000393120 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
MKS1-203ENST00000393120 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 COG3Q96JB2 828 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 RSPH6AQ9H0K4 717 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 PTPRUQ92729 1446 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 PDE4AP27815 886 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 BACH2Q9BYV9 841 aa18.47■□□□□ 0.55
MKS1-203ENST00000393120 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
MKS1-203ENST00000393120 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.46■□□□□ 0.55
MKS1-203ENST00000393120 CANXP27824 592 aaKnown RBP18.46■□□□□ 0.55
MKS1-203ENST00000393120 RIPK4P57078 832 aa18.46■□□□□ 0.55
MKS1-203ENST00000393120 IL13P35225 146 aa18.45■□□□□ 0.54
MKS1-203ENST00000393120 PTCH1Q13635 1447 aa18.45■□□□□ 0.54
MKS1-203ENST00000393120 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
MKS1-203ENST00000393120 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
MKS1-203ENST00000393120 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
MKS1-203ENST00000393120 NEFMP07197 916 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 FBLN1P23142 703 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
MKS1-203ENST00000393120 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
MKS1-203ENST00000393120 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
MKS1-203ENST00000393120 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
MKS1-203ENST00000393120 ANP32AP39687 249 aaKnown RBP18.42■□□□□ 0.54
MKS1-203ENST00000393120 FRAT1Q92837 279 aaPredicted RBP18.42■□□□□ 0.54
MKS1-203ENST00000393120 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
MKS1-203ENST00000393120 TTC21BQ7Z4L5 1316 aa18.41■□□□□ 0.54
MKS1-203ENST00000393120 ACEP12821 1306 aa18.41■□□□□ 0.54
MKS1-203ENST00000393120 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
MKS1-203ENST00000393120 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
MKS1-203ENST00000393120 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
MKS1-203ENST00000393120 USP6P35125 1406 aa18.39■□□□□ 0.54
MKS1-203ENST00000393120 NRKQ7Z2Y5 1582 aa18.39■□□□□ 0.53
MKS1-203ENST00000393120 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
MKS1-203ENST00000393120 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
MKS1-203ENST00000393120 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
MKS1-203ENST00000393120 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.53
MKS1-203ENST00000393120 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
MKS1-203ENST00000393120 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
MKS1-203ENST00000393120 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
MKS1-203ENST00000393120 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
MKS1-203ENST00000393120 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
MKS1-203ENST00000393120 IGHDP01880 384 aa18.37■□□□□ 0.53
MKS1-203ENST00000393120 RLBP1P12271 317 aa18.37■□□□□ 0.53
MKS1-203ENST00000393120 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
MKS1-203ENST00000393120 USP31Q70CQ4 1352 aa18.36■□□□□ 0.53
MKS1-203ENST00000393120 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
MKS1-203ENST00000393120 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
MKS1-203ENST00000393120 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
MKS1-203ENST00000393120 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
MKS1-203ENST00000393120 HMOX1P09601 288 aa18.35■□□□□ 0.53
MKS1-203ENST00000393120 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
MKS1-203ENST00000393120 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
MKS1-203ENST00000393120 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
MKS1-203ENST00000393120 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
MKS1-203ENST00000393120 ERICH6Q7L0X2 663 aa18.34■□□□□ 0.53
MKS1-203ENST00000393120 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
MKS1-203ENST00000393120 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
MKS1-203ENST00000393120 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms