RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 PMFBP1Q8TBY8 1022 aa23.3■■□□□ 1.32
SHTN1-203ENST00000392901 RUNDC1Q96C34 613 aa23.29■■□□□ 1.32
SHTN1-203ENST00000392901 ITSN1Q15811 1721 aa23.29■■□□□ 1.32
SHTN1-203ENST00000392901 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
SHTN1-203ENST00000392901 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
SHTN1-203ENST00000392901 COG3Q96JB2 828 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 MON2Q7Z3U7 1717 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 PPP4R2Q9NY27 417 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 RCAN3Q9UKA8 241 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
SHTN1-203ENST00000392901 AKAP12Q02952 1782 aa23.28■■□□□ 1.32
SHTN1-203ENST00000392901 POLKQ9UBT6 870 aa23.27■■□□□ 1.32
SHTN1-203ENST00000392901 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
SHTN1-203ENST00000392901 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
SHTN1-203ENST00000392901 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
SHTN1-203ENST00000392901 TTC21BQ7Z4L5 1316 aa23.25■■□□□ 1.31
SHTN1-203ENST00000392901 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
SHTN1-203ENST00000392901 CHD2O14647 1828 aaKnown RBP23.25■■□□□ 1.31
SHTN1-203ENST00000392901 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
SHTN1-203ENST00000392901 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
SHTN1-203ENST00000392901 NGDNQ8NEJ9 315 aaKnown RBP23.24■■□□□ 1.31
SHTN1-203ENST00000392901 COL3A1P02461 1466 aaPredicted RBP23.23■■□□□ 1.31
SHTN1-203ENST00000392901 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
SHTN1-203ENST00000392901 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
SHTN1-203ENST00000392901 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
SHTN1-203ENST00000392901 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
SHTN1-203ENST00000392901 USP6P35125 1406 aa23.22■■□□□ 1.31
SHTN1-203ENST00000392901 SLFN5Q08AF3 891 aa23.21■■□□□ 1.31
SHTN1-203ENST00000392901 SPINK5Q9NQ38 1064 aaPredicted RBP23.21■■□□□ 1.31
SHTN1-203ENST00000392901 TSHZ2Q9NRE2 1034 aa23.21■■□□□ 1.31
SHTN1-203ENST00000392901 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
SHTN1-203ENST00000392901 MAP2P11137 1827 aaKnown RBP23.2■■□□□ 1.3
SHTN1-203ENST00000392901 RRS1Q15050 365 aaKnown RBP23.2■■□□□ 1.3
SHTN1-203ENST00000392901 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
SHTN1-203ENST00000392901 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
SHTN1-203ENST00000392901 DMRT2Q9Y5R5 561 aa23.19■■□□□ 1.3
SHTN1-203ENST00000392901 RRP1P56182 461 aaKnown RBP23.18■■□□□ 1.3
SHTN1-203ENST00000392901 AATKQ6ZMQ8 1374 aa23.17■■□□□ 1.3
SHTN1-203ENST00000392901 NRKQ7Z2Y5 1582 aa23.17■■□□□ 1.3
SHTN1-203ENST00000392901 IQSEC2Q5JU85 1478 aa23.16■■□□□ 1.3
SHTN1-203ENST00000392901 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
SHTN1-203ENST00000392901 C14orf37Q86TY3 774 aa23.16■■□□□ 1.3
SHTN1-203ENST00000392901 E9PSI1 815 aa23.15■■□□□ 1.3
SHTN1-203ENST00000392901 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
SHTN1-203ENST00000392901 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.3
SHTN1-203ENST00000392901 NALCNQ8IZF0 1738 aa23.14■■□□□ 1.3
SHTN1-203ENST00000392901 SSH2Q76I76 1423 aa23.14■■□□□ 1.3
SHTN1-203ENST00000392901 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
SHTN1-203ENST00000392901 SOX12O15370 315 aa23.13■■□□□ 1.29
SHTN1-203ENST00000392901 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
SHTN1-203ENST00000392901 TTC21AQ8NDW8 1320 aa23.12■■□□□ 1.29
SHTN1-203ENST00000392901 OVOS2A0A0J9YW53 1432 aa23.12■■□□□ 1.29
SHTN1-203ENST00000392901 OVOS2Q6IE36 1432 aa23.12■■□□□ 1.29
SHTN1-203ENST00000392901 ADGRL3Q9HAR2 1447 aa23.1■■□□□ 1.29
SHTN1-203ENST00000392901 HSPA2P54652 639 aa23.1■■□□□ 1.29
SHTN1-203ENST00000392901 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
SHTN1-203ENST00000392901 PLIN1O60240 522 aa23.1■■□□□ 1.29
SHTN1-203ENST00000392901 IL13P35225 146 aa23.1■■□□□ 1.29
SHTN1-203ENST00000392901 CCDC27Q2M243 656 aa23.1■■□□□ 1.29
SHTN1-203ENST00000392901 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
SHTN1-203ENST00000392901 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
SHTN1-203ENST00000392901 FCHSD2O94868 740 aa23.09■■□□□ 1.29
SHTN1-203ENST00000392901 HMOX1P09601 288 aa23.09■■□□□ 1.29
SHTN1-203ENST00000392901 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
SHTN1-203ENST00000392901 TMPOP42166 694 aaKnown RBP23.08■■□□□ 1.29
SHTN1-203ENST00000392901 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.29
SHTN1-203ENST00000392901 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
SHTN1-203ENST00000392901 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
SHTN1-203ENST00000392901 WDR63Q8IWG1 891 aa23.07■■□□□ 1.28
SHTN1-203ENST00000392901 PRKAR2BP31323 418 aa23.07■■□□□ 1.28
SHTN1-203ENST00000392901 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
SHTN1-203ENST00000392901 KDM4FA0A1W2PPD8 638 aa23.06■■□□□ 1.28
SHTN1-203ENST00000392901 NLRP6P59044 892 aa23.06■■□□□ 1.28
SHTN1-203ENST00000392901 NUTM2GQ5VZR2 741 aa23.06■■□□□ 1.28
SHTN1-203ENST00000392901 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
SHTN1-203ENST00000392901 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
SHTN1-203ENST00000392901 EXOC6Q8TAG9 804 aa23.05■■□□□ 1.28
SHTN1-203ENST00000392901 NEFMP07197 916 aa23.04■■□□□ 1.28
SHTN1-203ENST00000392901 RIPK4P57078 832 aa23.04■■□□□ 1.28
SHTN1-203ENST00000392901 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
SHTN1-203ENST00000392901 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
SHTN1-203ENST00000392901 NWD1Q149M9 1564 aa23.03■■□□□ 1.28
SHTN1-203ENST00000392901 CCDC136Q96JN2 1154 aa23.02■■□□□ 1.28
SHTN1-203ENST00000392901 TRIM35Q9UPQ4 493 aa23.02■■□□□ 1.28
SHTN1-203ENST00000392901 HSP90AB2PQ58FF8 381 aa23.01■■□□□ 1.27
SHTN1-203ENST00000392901 PSME1Q06323 249 aa23■■□□□ 1.27
SHTN1-203ENST00000392901 EIF4A2Q14240 407 aaKnown RBP23■■□□□ 1.27
SHTN1-203ENST00000392901 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
SHTN1-203ENST00000392901 PIK3C2AO00443 1686 aa23■■□□□ 1.27
SHTN1-203ENST00000392901 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
SHTN1-203ENST00000392901 ORAI2Q96SN7 254 aa23■■□□□ 1.27
SHTN1-203ENST00000392901 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
SHTN1-203ENST00000392901 BCAR3O75815 825 aa22.97■■□□□ 1.27
SHTN1-203ENST00000392901 C19orf44Q9H6X5 657 aa22.97■■□□□ 1.27
SHTN1-203ENST00000392901 AMPHP49418 695 aa22.96■■□□□ 1.27
SHTN1-203ENST00000392901 C20orf194Q5TEA3 1177 aa22.96■■□□□ 1.27
SHTN1-203ENST00000392901 FOXO3O43524 673 aa22.96■■□□□ 1.27
SHTN1-203ENST00000392901 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
SHTN1-203ENST00000392901 PEAK1Q9H792 1746 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms