RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 EIF2AK4Q9P2K8 1649 aaKnown RBP23.5■■□□□ 1.35
PPFIA1-202ENST00000389547 KDM5DQ9BY66 1539 aa23.5■■□□□ 1.35
PPFIA1-202ENST00000389547 PARD3Q8TEW0 1356 aa23.5■■□□□ 1.35
PPFIA1-202ENST00000389547 SLC4A10Q6U841 1118 aa23.5■■□□□ 1.35
PPFIA1-202ENST00000389547 PANK1Q8TE04 598 aa23.5■■□□□ 1.35
PPFIA1-202ENST00000389547 THUMPD2Q9BTF0 503 aaKnown RBP23.49■■□□□ 1.35
PPFIA1-202ENST00000389547 MRE11P49959 708 aa23.48■■□□□ 1.35
PPFIA1-202ENST00000389547 YTHDC2Q9H6S0 1430 aaKnown RBP23.48■■□□□ 1.35
PPFIA1-202ENST00000389547 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
PPFIA1-202ENST00000389547 ACEP12821 1306 aa23.47■■□□□ 1.35
PPFIA1-202ENST00000389547 WWC1Q8IX03 1113 aa23.47■■□□□ 1.35
PPFIA1-202ENST00000389547 EXOSC9Q06265 439 aaKnown RBP23.47■■□□□ 1.35
PPFIA1-202ENST00000389547 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
PPFIA1-202ENST00000389547 HSPA2P54652 639 aa23.46■■□□□ 1.35
PPFIA1-202ENST00000389547 ESPNB1AK53 854 aa23.45■■□□□ 1.35
PPFIA1-202ENST00000389547 KCNA6P17658 529 aa23.45■■□□□ 1.35
PPFIA1-202ENST00000389547 TRPM2O94759 1503 aa23.45■■□□□ 1.34
PPFIA1-202ENST00000389547 TRAK2O60296 914 aa23.45■■□□□ 1.34
PPFIA1-202ENST00000389547 DDX11L8A8MPP1 907 aa23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 RRAGDQ9NQL2 400 aaPredicted RBP23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
PPFIA1-202ENST00000389547 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
PPFIA1-202ENST00000389547 PLCB2Q00722 1185 aa23.43■■□□□ 1.34
PPFIA1-202ENST00000389547 IQGAP3Q86VI3 1631 aa23.42■■□□□ 1.34
PPFIA1-202ENST00000389547 ANKRD36BQ8N2N9 1353 aa23.42■■□□□ 1.34
PPFIA1-202ENST00000389547 TPM2P07951 284 aa23.41■■□□□ 1.34
PPFIA1-202ENST00000389547 TMPOP42166 694 aaKnown RBP23.41■■□□□ 1.34
PPFIA1-202ENST00000389547 NLRP2Q9NX02 1062 aa23.41■■□□□ 1.34
PPFIA1-202ENST00000389547 ZNF330Q9Y3S2 320 aaPredicted RBP23.41■■□□□ 1.34
PPFIA1-202ENST00000389547 R3HCC1Q9Y3T6 440 aaKnown RBP23.41■■□□□ 1.34
PPFIA1-202ENST00000389547 ZC3H6P61129 1189 aaKnown RBP23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 CHMP5Q9NZZ3 219 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 ABCC3O15438 1527 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 ASXL1Q8IXJ9 1541 aa23.4■■□□□ 1.34
PPFIA1-202ENST00000389547 SLFN5Q08AF3 891 aa23.39■■□□□ 1.34
PPFIA1-202ENST00000389547 PLEKHH1Q9ULM0 1364 aa23.39■■□□□ 1.33
PPFIA1-202ENST00000389547 TEFQ10587 303 aa23.39■■□□□ 1.33
PPFIA1-202ENST00000389547 KIAA1211Q6ZU35 1233 aa23.39■■□□□ 1.33
PPFIA1-202ENST00000389547 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
PPFIA1-202ENST00000389547 KDM5CP41229 1560 aa23.38■■□□□ 1.33
PPFIA1-202ENST00000389547 RWDD1Q9H446 243 aaPredicted RBP23.37■■□□□ 1.33
PPFIA1-202ENST00000389547 UNC13BO14795 1591 aa23.37■■□□□ 1.33
PPFIA1-202ENST00000389547 CCDC9Q9Y3X0 531 aaKnown RBP23.37■■□□□ 1.33
PPFIA1-202ENST00000389547 GNAI1P63096 354 aa23.36■■□□□ 1.33
PPFIA1-202ENST00000389547 EFCAB6Q5THR3 1501 aa23.36■■□□□ 1.33
PPFIA1-202ENST00000389547 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
PPFIA1-202ENST00000389547 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 C20orf194Q5TEA3 1177 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 PPIP5K1Q6PFW1 1433 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 FCHSD2O94868 740 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 DZIP1LQ8IYY4 767 aaKnown RBP23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
PPFIA1-202ENST00000389547 PANK2Q9BZ23 570 aa23.34■■□□□ 1.33
PPFIA1-202ENST00000389547 CLTCL1P53675 1640 aa23.34■■□□□ 1.33
PPFIA1-202ENST00000389547 TET3O43151 1660 aa23.34■■□□□ 1.33
PPFIA1-202ENST00000389547 DDX49Q9Y6V7 483 aaKnown RBP23.34■■□□□ 1.33
PPFIA1-202ENST00000389547 HSP90AB2PQ58FF8 381 aa23.33■■□□□ 1.33
PPFIA1-202ENST00000389547 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.33■■□□□ 1.33
PPFIA1-202ENST00000389547 GRPEL1Q9HAV7 217 aa23.33■■□□□ 1.33
PPFIA1-202ENST00000389547 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
PPFIA1-202ENST00000389547 EVA1CP58658 441 aa23.33■■□□□ 1.32
PPFIA1-202ENST00000389547 METP08581 1390 aa23.32■■□□□ 1.32
PPFIA1-202ENST00000389547 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
PPFIA1-202ENST00000389547 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
PPFIA1-202ENST00000389547 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
PPFIA1-202ENST00000389547 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
PPFIA1-202ENST00000389547 TTC21BQ7Z4L5 1316 aa23.31■■□□□ 1.32
PPFIA1-202ENST00000389547 MCM4P33991 863 aa23.31■■□□□ 1.32
PPFIA1-202ENST00000389547 MIS18AQ9NYP9 233 aa23.31■■□□□ 1.32
PPFIA1-202ENST00000389547 CLCN1P35523 988 aa23.3■■□□□ 1.32
PPFIA1-202ENST00000389547 OS9Q13438 667 aaPredicted RBP23.3■■□□□ 1.32
PPFIA1-202ENST00000389547 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
PPFIA1-202ENST00000389547 XRCC6P12956 609 aaKnown RBP eCLIP23.3■■□□□ 1.32
PPFIA1-202ENST00000389547 MCM10Q7L590 875 aa23.29■■□□□ 1.32
PPFIA1-202ENST00000389547 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
PPFIA1-202ENST00000389547 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
PPFIA1-202ENST00000389547 E9PCH4 1651 aa23.28■■□□□ 1.32
PPFIA1-202ENST00000389547 PDCL3Q9H2J4 239 aa23.27■■□□□ 1.32
PPFIA1-202ENST00000389547 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
PPFIA1-202ENST00000389547 NFE2L2Q16236 605 aa23.27■■□□□ 1.32
PPFIA1-202ENST00000389547 PUS7Q96PZ0 661 aaKnown RBP23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 FAM83GA6ND36 823 aa23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 PTMSP20962 102 aa23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 NINLQ9Y2I6 1382 aa23.26■■□□□ 1.31
PPFIA1-202ENST00000389547 NASPP49321 788 aaPredicted RBP23.25■■□□□ 1.31
PPFIA1-202ENST00000389547 NSD2O96028 1365 aa23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 RNF17Q9BXT8 1623 aaKnown RBP23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 BCORL1Q5H9F3 1711 aa23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms