RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
RAPGEF3-201ENST00000389212 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.01
RAPGEF3-201ENST00000389212 EXOSC9Q06265 439 aaKnown RBP14.96□□□□□ -0.02
RAPGEF3-201ENST00000389212 CDK19Q9BWU1 502 aa14.96□□□□□ -0.02
RAPGEF3-201ENST00000389212 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
RAPGEF3-201ENST00000389212 TMPOP42166 694 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-201ENST00000389212 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
RAPGEF3-201ENST00000389212 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
RAPGEF3-201ENST00000389212 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 AAMPQ13685 434 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 PLEKHF1Q96S99 279 aa14.93□□□□□ -0.02
RAPGEF3-201ENST00000389212 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 PTPRMP28827 1452 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 RIPK4P57078 832 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 NSD2O96028 1365 aa14.92□□□□□ -0.02
RAPGEF3-201ENST00000389212 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
RAPGEF3-201ENST00000389212 NFKBIBQ15653 356 aa14.91□□□□□ -0.02
RAPGEF3-201ENST00000389212 HDGFL2Q7Z4V5 671 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF3-201ENST00000389212 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
RAPGEF3-201ENST00000389212 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
RAPGEF3-201ENST00000389212 HMOX1P09601 288 aa14.9□□□□□ -0.02
RAPGEF3-201ENST00000389212 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-201ENST00000389212 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
RAPGEF3-201ENST00000389212 USP19O94966 1318 aa14.9□□□□□ -0.02
RAPGEF3-201ENST00000389212 NCKAP5LQ9HCH0 1330 aa14.9□□□□□ -0.02
RAPGEF3-201ENST00000389212 NINLQ9Y2I6 1382 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 CD163L1Q9NR16 1453 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 DZIP1LQ8IYY4 767 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 THUMPD2Q9BTF0 503 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
RAPGEF3-201ENST00000389212 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
RAPGEF3-201ENST00000389212 TRIM27P14373 513 aa14.88□□□□□ -0.03
RAPGEF3-201ENST00000389212 TSPOAP1O95153 1857 aa14.88□□□□□ -0.03
RAPGEF3-201ENST00000389212 NOB1Q9ULX3 412 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-201ENST00000389212 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
RAPGEF3-201ENST00000389212 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
RAPGEF3-201ENST00000389212 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-201ENST00000389212 ARID3AQ99856 593 aa14.86□□□□□ -0.03
RAPGEF3-201ENST00000389212 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
RAPGEF3-201ENST00000389212 EMILIN1Q9Y6C2 1016 aa14.86□□□□□ -0.03
RAPGEF3-201ENST00000389212 ALKQ9UM73 1620 aa14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 RWDD1Q9H446 243 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 NLRP1Q9C000 1473 aa14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 FRAT2O75474 233 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 TXNDC2Q86VQ3 553 aa14.85□□□□□ -0.03
RAPGEF3-201ENST00000389212 ELL2O00472 640 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 NME9Q86XW9 330 aa14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 POLKQ9UBT6 870 aa14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
RAPGEF3-201ENST00000389212 NUTM2FA1L443 756 aa14.83□□□□□ -0.04
RAPGEF3-201ENST00000389212 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
RAPGEF3-201ENST00000389212 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
RAPGEF3-201ENST00000389212 RRS1Q15050 365 aaKnown RBP14.82□□□□□ -0.04
RAPGEF3-201ENST00000389212 SPRYD3Q8NCJ5 442 aa14.82□□□□□ -0.04
RAPGEF3-201ENST00000389212 RIMS2Q9UQ26 1411 aa14.8□□□□□ -0.04
RAPGEF3-201ENST00000389212 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 TSPYL6Q8N831 410 aa14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 A2ML1A8K2U0 1454 aa14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 METP08581 1390 aa14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 C1orf115Q9H7X2 142 aa14.79□□□□□ -0.04
RAPGEF3-201ENST00000389212 CLTCQ00610 1675 aaKnown RBP14.78□□□□□ -0.04
RAPGEF3-201ENST00000389212 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
RAPGEF3-201ENST00000389212 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
RAPGEF3-201ENST00000389212 FAM83GA6ND36 823 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 FCHSD2O94868 740 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 DCTN1Q14203 1278 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 SOX12O15370 315 aa14.77□□□□□ -0.04
RAPGEF3-201ENST00000389212 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.05
RAPGEF3-201ENST00000389212 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 CT47B1P0C2W7 299 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 PPIP5K1Q6PFW1 1433 aa14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 LNPKQ9C0E8 428 aa14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-201ENST00000389212 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-201ENST00000389212 PAXIP1Q6ZW49 1069 aaPredicted RBP14.75□□□□□ -0.05
RAPGEF3-201ENST00000389212 IL16Q14005 1332 aa14.75□□□□□ -0.05
RAPGEF3-201ENST00000389212 VIRMAQ69YN4 1812 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
RAPGEF3-201ENST00000389212 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms