RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
SGCB-201ENST00000381431 PES1O00541 588 aaKnown RBP20.77■□□□□ 0.92
SGCB-201ENST00000381431 GNAI2P04899 355 aa20.77■□□□□ 0.92
SGCB-201ENST00000381431 CT47B1P0C2W7 299 aaPredicted RBP20.77■□□□□ 0.92
SGCB-201ENST00000381431 RABEP1Q15276 862 aa20.77■□□□□ 0.91
SGCB-201ENST00000381431 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
SGCB-201ENST00000381431 DUSP27Q5VZP5 1158 aa20.76■□□□□ 0.91
SGCB-201ENST00000381431 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
SGCB-201ENST00000381431 DCTN1Q14203 1278 aa20.75■□□□□ 0.91
SGCB-201ENST00000381431 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
SGCB-201ENST00000381431 FCHSD2O94868 740 aa20.75■□□□□ 0.91
SGCB-201ENST00000381431 FSD1Q9BTV5 496 aa20.75■□□□□ 0.91
SGCB-201ENST00000381431 CCDC141Q6ZP82 1450 aa20.74■□□□□ 0.91
SGCB-201ENST00000381431 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
SGCB-201ENST00000381431 AKAP17AQ02040 695 aaKnown RBP20.74■□□□□ 0.91
SGCB-201ENST00000381431 ESCO1Q5FWF5 840 aa20.73■□□□□ 0.91
SGCB-201ENST00000381431 SYNE3Q6ZMZ3 975 aa20.73■□□□□ 0.91
SGCB-201ENST00000381431 CNTROBQ8N137 903 aa20.73■□□□□ 0.91
SGCB-201ENST00000381431 MIS18AQ9NYP9 233 aa20.73■□□□□ 0.91
SGCB-201ENST00000381431 TRDNQ13061 729 aa20.72■□□□□ 0.91
SGCB-201ENST00000381431 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
SGCB-201ENST00000381431 CCAR2Q8N163 923 aaKnown RBP20.72■□□□□ 0.91
SGCB-201ENST00000381431 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
SGCB-201ENST00000381431 RTEL1-TNFRSF6BF6WH68 1400 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 FIBPO43427 364 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 MCM4P33991 863 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 CHMP4CQ96CF2 233 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
SGCB-201ENST00000381431 MPNDQ8N594 471 aa20.7■□□□□ 0.9
SGCB-201ENST00000381431 CCDC61Q9Y6R9 512 aa20.7■□□□□ 0.9
SGCB-201ENST00000381431 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
SGCB-201ENST00000381431 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
SGCB-201ENST00000381431 MAP4K4O95819 1239 aaPredicted RBP20.7■□□□□ 0.9
SGCB-201ENST00000381431 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.9
SGCB-201ENST00000381431 BCL11BQ9C0K0 894 aaPredicted RBP20.69■□□□□ 0.9
SGCB-201ENST00000381431 TPD52L1Q16890 204 aaPredicted RBP20.69■□□□□ 0.9
SGCB-201ENST00000381431 SASS6Q6UVJ0 657 aa20.69■□□□□ 0.9
SGCB-201ENST00000381431 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
SGCB-201ENST00000381431 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
SGCB-201ENST00000381431 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
SGCB-201ENST00000381431 TRIM29Q14134 588 aa20.68■□□□□ 0.9
SGCB-201ENST00000381431 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
SGCB-201ENST00000381431 LRRCC1Q9C099 1032 aa20.68■□□□□ 0.9
SGCB-201ENST00000381431 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.68■□□□□ 0.9
SGCB-201ENST00000381431 MCM10Q7L590 875 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 CCT4P50991 539 aaKnown RBP20.67■□□□□ 0.9
SGCB-201ENST00000381431 CCDC73Q6ZRK6 1079 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 NUDT16Q96DE0 195 aaKnown RBP20.67■□□□□ 0.9
SGCB-201ENST00000381431 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
SGCB-201ENST00000381431 MARCH6O60337 910 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 TPM3P06753 285 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 SRCIN1Q9C0H9 1055 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 SIL1Q9H173 461 aa20.67■□□□□ 0.9
SGCB-201ENST00000381431 ATF3P18847 181 aa20.66■□□□□ 0.9
SGCB-201ENST00000381431 NFXL1Q6ZNB6 911 aa20.66■□□□□ 0.9
SGCB-201ENST00000381431 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
SGCB-201ENST00000381431 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
SGCB-201ENST00000381431 MBD3O95983 291 aa20.66■□□□□ 0.9
SGCB-201ENST00000381431 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
SGCB-201ENST00000381431 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
SGCB-201ENST00000381431 G3V3G9 751 aa20.65■□□□□ 0.9
SGCB-201ENST00000381431 KDM4AO75164 1064 aa20.65■□□□□ 0.9
SGCB-201ENST00000381431 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
SGCB-201ENST00000381431 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
SGCB-201ENST00000381431 IDI1Q13907 227 aa20.65■□□□□ 0.9
SGCB-201ENST00000381431 MCM2P49736 904 aa20.64■□□□□ 0.9
SGCB-201ENST00000381431 NME9Q86XW9 330 aa20.64■□□□□ 0.89
SGCB-201ENST00000381431 SRGAP3O43295 1099 aa20.64■□□□□ 0.89
SGCB-201ENST00000381431 SDF4Q9BRK5 362 aa20.64■□□□□ 0.89
SGCB-201ENST00000381431 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
SGCB-201ENST00000381431 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
SGCB-201ENST00000381431 IGHDP01880 384 aa20.63■□□□□ 0.89
SGCB-201ENST00000381431 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
SGCB-201ENST00000381431 TRIM27P14373 513 aa20.63■□□□□ 0.89
SGCB-201ENST00000381431 PSMA5P28066 241 aa20.62■□□□□ 0.89
SGCB-201ENST00000381431 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
SGCB-201ENST00000381431 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
SGCB-201ENST00000381431 FBLN1P23142 703 aa20.62■□□□□ 0.89
SGCB-201ENST00000381431 HOMER1Q86YM7 354 aa20.62■□□□□ 0.89
SGCB-201ENST00000381431 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
SGCB-201ENST00000381431 RPAP2Q8IXW5 612 aaPredicted RBP20.62■□□□□ 0.89
SGCB-201ENST00000381431 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
SGCB-201ENST00000381431 VPS37DQ86XT2 251 aa20.61■□□□□ 0.89
SGCB-201ENST00000381431 CEBPZQ03701 1054 aaKnown RBP20.61■□□□□ 0.89
SGCB-201ENST00000381431 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
SGCB-201ENST00000381431 GRPEL1Q9HAV7 217 aa20.61■□□□□ 0.89
SGCB-201ENST00000381431 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
SGCB-201ENST00000381431 LRPPRCP42704 1394 aaKnown RBP20.61■□□□□ 0.89
SGCB-201ENST00000381431 FAM177BA6PVY3 158 aa20.61■□□□□ 0.89
SGCB-201ENST00000381431 PDE4CQ08493 712 aa20.6■□□□□ 0.89
SGCB-201ENST00000381431 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
SGCB-201ENST00000381431 VPS53Q5VIR6 699 aa20.6■□□□□ 0.89
SGCB-201ENST00000381431 UPF3BQ9BZI7 483 aaKnown RBP20.6■□□□□ 0.89
SGCB-201ENST00000381431 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
SGCB-201ENST00000381431 NOC3LQ8WTT2 800 aaKnown RBP20.59■□□□□ 0.89
SGCB-201ENST00000381431 STK3Q13188 491 aa20.59■□□□□ 0.89
SGCB-201ENST00000381431 PROSER2Q86WR7 435 aaPredicted RBP20.59■□□□□ 0.89
SGCB-201ENST00000381431 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms