RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RUNDC1Q96C34 613 aa26.2■■□□□ 1.78
PDLIM5-205ENST00000380180 NME9Q86XW9 330 aa26.19■■□□□ 1.78
PDLIM5-205ENST00000380180 NGEFQ8N5V2 710 aa26.19■■□□□ 1.78
PDLIM5-205ENST00000380180 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
PDLIM5-205ENST00000380180 PLEKHG3A1L390 1219 aa26.18■■□□□ 1.78
PDLIM5-205ENST00000380180 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
PDLIM5-205ENST00000380180 ACEP12821 1306 aa26.17■■□□□ 1.78
PDLIM5-205ENST00000380180 U2AF1L5P0DN76 240 aaPredicted RBP26.17■■□□□ 1.78
PDLIM5-205ENST00000380180 U2AF1Q01081 240 aaKnown RBP eCLIP26.17■■□□□ 1.781e-7■■■■■ 28.2
PDLIM5-205ENST00000380180 PPP4R2Q9NY27 417 aa26.16■■□□□ 1.78
PDLIM5-205ENST00000380180 FBLN1P23142 703 aa26.15■■□□□ 1.78
PDLIM5-205ENST00000380180 DUSP27Q5VZP5 1158 aa26.15■■□□□ 1.78
PDLIM5-205ENST00000380180 ZRANB1Q9UGI0 708 aa26.15■■□□□ 1.78
PDLIM5-205ENST00000380180 NKTRP30414 1462 aaKnown RBP26.15■■□□□ 1.78
PDLIM5-205ENST00000380180 PNPLA6Q8IY17 1366 aa26.14■■□□□ 1.78
PDLIM5-205ENST00000380180 SLFN5Q08AF3 891 aa26.14■■□□□ 1.78
PDLIM5-205ENST00000380180 NRKQ7Z2Y5 1582 aa26.14■■□□□ 1.77
PDLIM5-205ENST00000380180 POLKQ9UBT6 870 aa26.14■■□□□ 1.77
PDLIM5-205ENST00000380180 TCP11L2Q8N4U5 519 aa26.13■■□□□ 1.77
PDLIM5-205ENST00000380180 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
PDLIM5-205ENST00000380180 IQSEC2Q5JU85 1478 aa26.12■■□□□ 1.77
PDLIM5-205ENST00000380180 COG3Q96JB2 828 aa26.12■■□□□ 1.77
PDLIM5-205ENST00000380180 U2SURPO15042 1029 aaKnown RBP26.11■■□□□ 1.77
PDLIM5-205ENST00000380180 DIAPH1O60610 1272 aaKnown RBP26.1■■□□□ 1.77
PDLIM5-205ENST00000380180 TRMT2AQ8IZ69 625 aaKnown RBP26.1■■□□□ 1.77
PDLIM5-205ENST00000380180 WWC1Q8IX03 1113 aa26.1■■□□□ 1.77
PDLIM5-205ENST00000380180 SPINK5Q9NQ38 1064 aaPredicted RBP26.1■■□□□ 1.77
PDLIM5-205ENST00000380180 TTC21BQ7Z4L5 1316 aa26.09■■□□□ 1.77
PDLIM5-205ENST00000380180 PPM1GO15355 546 aaPredicted RBP26.09■■□□□ 1.77
PDLIM5-205ENST00000380180 NEUROD2Q15784 382 aa26.09■■□□□ 1.77
PDLIM5-205ENST00000380180 RRP7AQ9Y3A4 280 aaKnown RBP26.09■■□□□ 1.77
PDLIM5-205ENST00000380180 USP6P35125 1406 aa26.09■■□□□ 1.77
PDLIM5-205ENST00000380180 NPHP4O75161 1426 aaPredicted RBP26.08■■□□□ 1.77
PDLIM5-205ENST00000380180 FMN2Q9NZ56 1722 aa26.08■■□□□ 1.76
PDLIM5-205ENST00000380180 PMFBP1Q8TBY8 1022 aa26.07■■□□□ 1.76
PDLIM5-205ENST00000380180 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
PDLIM5-205ENST00000380180 AATKQ6ZMQ8 1374 aa26.07■■□□□ 1.76
PDLIM5-205ENST00000380180 E9PSI1 815 aa26.06■■□□□ 1.76
PDLIM5-205ENST00000380180 NALCNQ8IZF0 1738 aa26.06■■□□□ 1.76
PDLIM5-205ENST00000380180 EMILIN1Q9Y6C2 1016 aa26.05■■□□□ 1.76
PDLIM5-205ENST00000380180 PLEKHF1Q96S99 279 aa26.05■■□□□ 1.76
PDLIM5-205ENST00000380180 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
PDLIM5-205ENST00000380180 SSH2Q76I76 1423 aa26.03■■□□□ 1.76
PDLIM5-205ENST00000380180 ANKARQ7Z5J8 1434 aa26.03■■□□□ 1.76
PDLIM5-205ENST00000380180 CCDC27Q2M243 656 aa26.02■■□□□ 1.76
PDLIM5-205ENST00000380180 NCBP3Q53F19 620 aaKnown RBP26.02■■□□□ 1.76
PDLIM5-205ENST00000380180 B4GALNT3Q6L9W6 998 aa26.02■■□□□ 1.76
PDLIM5-205ENST00000380180 NGDNQ8NEJ9 315 aaKnown RBP26.02■■□□□ 1.76
PDLIM5-205ENST00000380180 CDK12Q9NYV4 1490 aaPredicted RBP26■■□□□ 1.75
PDLIM5-205ENST00000380180 RRS1Q15050 365 aaKnown RBP26■■□□□ 1.75
PDLIM5-205ENST00000380180 RBM33Q96EV2 1170 aaKnown RBP26■■□□□ 1.75
PDLIM5-205ENST00000380180 OVOS2A0A0J9YW53 1432 aa25.99■■□□□ 1.75
PDLIM5-205ENST00000380180 OVOS2Q6IE36 1432 aa25.99■■□□□ 1.75
PDLIM5-205ENST00000380180 PLIN1O60240 522 aa25.98■■□□□ 1.75
PDLIM5-205ENST00000380180 WDR63Q8IWG1 891 aa25.98■■□□□ 1.75
PDLIM5-205ENST00000380180 TTC21AQ8NDW8 1320 aa25.97■■□□□ 1.75
PDLIM5-205ENST00000380180 PNNQ9H307 717 aaKnown RBP25.97■■□□□ 1.75
PDLIM5-205ENST00000380180 MAPK8IP3Q9UPT6 1336 aa25.96■■□□□ 1.75
PDLIM5-205ENST00000380180 FCHSD2O94868 740 aa25.96■■□□□ 1.75
PDLIM5-205ENST00000380180 IL13P35225 146 aa25.95■■□□□ 1.75
PDLIM5-205ENST00000380180 TMPOP42166 694 aaKnown RBP25.95■■□□□ 1.75
PDLIM5-205ENST00000380180 LRRC7Q96NW7 1537 aa25.94■■□□□ 1.74
PDLIM5-205ENST00000380180 EXOC6Q8TAG9 804 aa25.93■■□□□ 1.74
PDLIM5-205ENST00000380180 USP31Q70CQ4 1352 aa25.92■■□□□ 1.74
PDLIM5-205ENST00000380180 RSPH6AQ9H0K4 717 aa25.92■■□□□ 1.74
PDLIM5-205ENST00000380180 ADGRL3Q9HAR2 1447 aa25.92■■□□□ 1.74
PDLIM5-205ENST00000380180 PIK3C2AO00443 1686 aa25.91■■□□□ 1.74
PDLIM5-205ENST00000380180 NWD1Q149M9 1564 aa25.91■■□□□ 1.74
PDLIM5-205ENST00000380180 HMOX1P09601 288 aa25.9■■□□□ 1.74
PDLIM5-205ENST00000380180 PRKAR2BP31323 418 aa25.9■■□□□ 1.74
PDLIM5-205ENST00000380180 TRIM35Q9UPQ4 493 aa25.9■■□□□ 1.74
PDLIM5-205ENST00000380180 CCDC136Q96JN2 1154 aa25.89■■□□□ 1.74
PDLIM5-205ENST00000380180 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
PDLIM5-205ENST00000380180 RIPK4P57078 832 aa25.88■■□□□ 1.73
PDLIM5-205ENST00000380180 PHF8Q9UPP1 1060 aa25.87■■□□□ 1.73
PDLIM5-205ENST00000380180 C14orf37Q86TY3 774 aa25.87■■□□□ 1.73
PDLIM5-205ENST00000380180 SOX12O15370 315 aa25.86■■□□□ 1.73
PDLIM5-205ENST00000380180 NEFMP07197 916 aa25.85■■□□□ 1.73
PDLIM5-205ENST00000380180 MARF1Q9Y4F3 1742 aaKnown RBP25.85■■□□□ 1.73
PDLIM5-205ENST00000380180 C20orf194Q5TEA3 1177 aa25.85■■□□□ 1.73
PDLIM5-205ENST00000380180 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.84■■□□□ 1.73
PDLIM5-205ENST00000380180 PHACTR3Q96KR7 559 aa25.84■■□□□ 1.73
PDLIM5-205ENST00000380180 MYH16Q9H6N6 1097 aa25.84■■□□□ 1.73
PDLIM5-205ENST00000380180 TSHZ2Q9NRE2 1034 aa25.84■■□□□ 1.73
PDLIM5-205ENST00000380180 BCAR3O75815 825 aa25.83■■□□□ 1.73
PDLIM5-205ENST00000380180 NLRP6P59044 892 aa25.83■■□□□ 1.73
PDLIM5-205ENST00000380180 PROSER2Q86WR7 435 aaPredicted RBP25.83■■□□□ 1.73
PDLIM5-205ENST00000380180 CRBNQ96SW2 442 aa25.83■■□□□ 1.73
PDLIM5-205ENST00000380180 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
PDLIM5-205ENST00000380180 DLG5Q8TDM6 1919 aa25.82■■□□□ 1.72
PDLIM5-205ENST00000380180 ESCO1Q5FWF5 840 aa25.81■■□□□ 1.72
PDLIM5-205ENST00000380180 USP54Q70EL1 1684 aa25.81■■□□□ 1.72
PDLIM5-205ENST00000380180 PAK3O75914 559 aaPredicted RBP25.81■■□□□ 1.72
PDLIM5-205ENST00000380180 HSP90AB2PQ58FF8 381 aa25.81■■□□□ 1.72
PDLIM5-205ENST00000380180 MAP3K19Q56UN5 1328 aa25.8■■□□□ 1.72
PDLIM5-205ENST00000380180 ABTB2Q8N961 1025 aa25.8■■□□□ 1.72
PDLIM5-205ENST00000380180 NUTM2GQ5VZR2 741 aa25.79■■□□□ 1.72
PDLIM5-205ENST00000380180 NFE2L2Q16236 605 aa25.78■■□□□ 1.72
PDLIM5-205ENST00000380180 IL16Q14005 1332 aa25.78■■□□□ 1.72
PDLIM5-205ENST00000380180 STRCP1A6NGW2 1772 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms