RNA–Protein interactions for RNA: ENST00000378615.7

C11orf49-202, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene C11orf49, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-202ENST00000378615 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
C11orf49-202ENST00000378615 RWDD1Q9H446 243 aaPredicted RBP13.25□□□□□ -0.29
C11orf49-202ENST00000378615 BECN1Q14457 450 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 IL16Q14005 1332 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 IGHDP01880 384 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 TMEM132EQ6IEE7 984 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
C11orf49-202ENST00000378615 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
C11orf49-202ENST00000378615 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
C11orf49-202ENST00000378615 SLIT1O75093 1534 aa13.23□□□□□ -0.29
C11orf49-202ENST00000378615 SKAP1Q86WV1 359 aa13.23□□□□□ -0.29
C11orf49-202ENST00000378615 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
C11orf49-202ENST00000378615 LTKP29376 864 aa13.22□□□□□ -0.29
C11orf49-202ENST00000378615 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
C11orf49-202ENST00000378615 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
C11orf49-202ENST00000378615 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
C11orf49-202ENST00000378615 NFKBIBQ15653 356 aa13.21□□□□□ -0.29
C11orf49-202ENST00000378615 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
C11orf49-202ENST00000378615 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
C11orf49-202ENST00000378615 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
C11orf49-202ENST00000378615 EID1Q9Y6B2 187 aa13.21□□□□□ -0.29
C11orf49-202ENST00000378615 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
C11orf49-202ENST00000378615 GSE1Q14687 1217 aa13.2□□□□□ -0.3
C11orf49-202ENST00000378615 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
C11orf49-202ENST00000378615 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
C11orf49-202ENST00000378615 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
C11orf49-202ENST00000378615 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
C11orf49-202ENST00000378615 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
C11orf49-202ENST00000378615 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
C11orf49-202ENST00000378615 ANKLE2Q86XL3 938 aa13.18□□□□□ -0.3
C11orf49-202ENST00000378615 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
C11orf49-202ENST00000378615 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
C11orf49-202ENST00000378615 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
C11orf49-202ENST00000378615 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
C11orf49-202ENST00000378615 PLEKHG1Q9ULL1 1385 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 SRPK2P78362 688 aaKnown RBP13.17□□□□□ -0.3
C11orf49-202ENST00000378615 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
C11orf49-202ENST00000378615 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
C11orf49-202ENST00000378615 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
C11orf49-202ENST00000378615 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
C11orf49-202ENST00000378615 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
C11orf49-202ENST00000378615 SENP3Q9H4L4 574 aaPredicted RBP13.16□□□□□ -0.3
C11orf49-202ENST00000378615 PNPLA6Q8IY17 1366 aa13.16□□□□□ -0.3
C11orf49-202ENST00000378615 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
C11orf49-202ENST00000378615 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
C11orf49-202ENST00000378615 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
C11orf49-202ENST00000378615 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.3
C11orf49-202ENST00000378615 USP19O94966 1318 aa13.15□□□□□ -0.3
C11orf49-202ENST00000378615 POGKQ9P215 609 aa13.15□□□□□ -0.31
C11orf49-202ENST00000378615 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.31
C11orf49-202ENST00000378615 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.31
C11orf49-202ENST00000378615 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
C11orf49-202ENST00000378615 ALDH1L2Q3SY69 923 aa13.14□□□□□ -0.31
C11orf49-202ENST00000378615 ATP7BP35670 1465 aa13.13□□□□□ -0.31
C11orf49-202ENST00000378615 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
C11orf49-202ENST00000378615 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
C11orf49-202ENST00000378615 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
C11orf49-202ENST00000378615 CD163L1Q9NR16 1453 aa13.13□□□□□ -0.31
C11orf49-202ENST00000378615 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
C11orf49-202ENST00000378615 FYB1O15117 783 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 FCHSD2O94868 740 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 RLBP1P12271 317 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
C11orf49-202ENST00000378615 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
C11orf49-202ENST00000378615 NCKAP5LQ9HCH0 1330 aa13.11□□□□□ -0.31
C11orf49-202ENST00000378615 PPIP5K1Q6PFW1 1433 aa13.11□□□□□ -0.31
C11orf49-202ENST00000378615 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
C11orf49-202ENST00000378615 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
C11orf49-202ENST00000378615 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
C11orf49-202ENST00000378615 METP08581 1390 aa13.1□□□□□ -0.31
C11orf49-202ENST00000378615 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
C11orf49-202ENST00000378615 EIF5BO60841 1220 aaKnown RBP13.09□□□□□ -0.31
C11orf49-202ENST00000378615 HSPA2P54652 639 aa13.09□□□□□ -0.31
C11orf49-202ENST00000378615 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
C11orf49-202ENST00000378615 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
C11orf49-202ENST00000378615 STK26Q9P289 416 aa13.09□□□□□ -0.31
C11orf49-202ENST00000378615 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
C11orf49-202ENST00000378615 RIPK4P57078 832 aa13.08□□□□□ -0.31
C11orf49-202ENST00000378615 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
C11orf49-202ENST00000378615 TRIM27P14373 513 aa13.08□□□□□ -0.32
C11orf49-202ENST00000378615 SMC5Q8IY18 1101 aa13.08□□□□□ -0.32
C11orf49-202ENST00000378615 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
C11orf49-202ENST00000378615 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
C11orf49-202ENST00000378615 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
C11orf49-202ENST00000378615 SAFB2Q14151 953 aaKnown RBP eCLIP13.07□□□□□ -0.32
C11orf49-202ENST00000378615 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
C11orf49-202ENST00000378615 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
C11orf49-202ENST00000378615 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
C11orf49-202ENST00000378615 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
C11orf49-202ENST00000378615 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms