RNA–Protein interactions for RNA: ENST00000378588.4

CYBB-201, Transcript of cytochrome b-245 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYBB, Length 4,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBB-201ENST00000378588 FAM135AQ9P2D6 1515 aa7.54□□□□□ -1.2
CYBB-201ENST00000378588 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
CYBB-201ENST00000378588 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
CYBB-201ENST00000378588 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
CYBB-201ENST00000378588 SHANK2Q9UPX8 1470 aa7.54□□□□□ -1.2
CYBB-201ENST00000378588 DDX58O95786 925 aaKnown RBP7.54□□□□□ -1.2
CYBB-201ENST00000378588 PSME1Q06323 249 aa7.54□□□□□ -1.2
CYBB-201ENST00000378588 CIZ1Q9ULV3 898 aaPredicted RBP7.54□□□□□ -1.2
CYBB-201ENST00000378588 ISY1Q9ULR0 285 aaKnown RBP7.53□□□□□ -1.2
CYBB-201ENST00000378588 RNF123Q5XPI4 1314 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 CD109Q6YHK3 1445 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 IGHDP01880 384 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 GNAI2P04899 355 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 MCM2P49736 904 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 ERC2O15083 957 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 RPAP2Q8IXW5 612 aaPredicted RBP7.53□□□□□ -1.2
CYBB-201ENST00000378588 NSD2O96028 1365 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 NOS1P29475 1434 aa7.53□□□□□ -1.2
CYBB-201ENST00000378588 DISP1Q96F81 1524 aa7.52□□□□□ -1.2
CYBB-201ENST00000378588 DUOX2Q9NRD8 1548 aa7.52□□□□□ -1.2
CYBB-201ENST00000378588 DNMT1P26358 1616 aaKnown RBP7.52□□□□□ -1.2
CYBB-201ENST00000378588 CCT4P50991 539 aaKnown RBP7.52□□□□□ -1.21
CYBB-201ENST00000378588 NEK4P51957 841 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 G3BP1Q13283 466 aaKnown RBP eCLIP7.52□□□□□ -1.21
CYBB-201ENST00000378588 HSP90AA2PQ14568 343 aaPredicted RBP7.52□□□□□ -1.21
CYBB-201ENST00000378588 CHMP4CQ96CF2 233 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 SPATA31E1Q6ZUB1 1445 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 ADGRL2O95490 1459 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 SAMD9Q5K651 1589 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 K7ELQ4 463 aaPredicted RBP7.52□□□□□ -1.21
CYBB-201ENST00000378588 TRIM27P14373 513 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 FANCAO15360 1455 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
CYBB-201ENST00000378588 RRS1Q15050 365 aaKnown RBP7.52□□□□□ -1.21
CYBB-201ENST00000378588 FAM43AQ8N2R8 423 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
CYBB-201ENST00000378588 ASXL1Q8IXJ9 1541 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 NASPP49321 788 aaPredicted RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 RNF20Q5VTR2 975 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 NUDT16Q96DE0 195 aaKnown RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 THUMPD2Q9BTF0 503 aaKnown RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 SMC3Q9UQE7 1217 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 CWC22Q9HCG8 908 aaKnown RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 TARBP1Q13395 1621 aaKnown RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 H3BQV1 296 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 IFFO2Q5TF58 517 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 WAPLQ7Z5K2 1190 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 CLASRPQ8N2M8 674 aaKnown RBP7.51□□□□□ -1.21
CYBB-201ENST00000378588 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 NUTM2GQ5VZR2 741 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 SYCP2Q9BX26 1530 aa7.51□□□□□ -1.21
CYBB-201ENST00000378588 PLEKHH1Q9ULM0 1364 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 IL16Q14005 1332 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 MBD3O95983 291 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 TTC5Q8N0Z6 440 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 POLR3AO14802 1390 aaPredicted RBP7.5□□□□□ -1.21
CYBB-201ENST00000378588 CDK11BP21127 795 aaKnown RBP7.5□□□□□ -1.21
CYBB-201ENST00000378588 TPM4P67936 248 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 MAGI3Q5TCQ9 1506 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 KDM5BQ9UGL1 1544 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 NPHP1O15259 732 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 SF3A1Q15459 793 aaKnown RBP7.5□□□□□ -1.21
CYBB-201ENST00000378588 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 PIK3C2GO75747 1445 aa7.5□□□□□ -1.21
CYBB-201ENST00000378588 CAVIN1Q6NZI2 390 aaKnown RBP7.49□□□□□ -1.21
CYBB-201ENST00000378588 CNTROBQ8N137 903 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
CYBB-201ENST00000378588 TRAPPC8Q9Y2L5 1435 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 CARD14Q9BXL6 1004 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 LRRCC1Q9C099 1032 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 PRPF40AO75400 957 aaKnown RBP7.49□□□□□ -1.21
CYBB-201ENST00000378588 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
CYBB-201ENST00000378588 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
CYBB-201ENST00000378588 VPS37CA5D8V6 355 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 COL17A1Q9UMD9 1497 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 RAPGEF4Q8WZA2 1011 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 NPC1L1Q9UHC9 1359 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 INSRP06213 1382 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 HDAC1Q13547 482 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 GRPEL1Q9HAV7 217 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 CCDC9Q9Y3X0 531 aaKnown RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 GOLGA6L19H0YKK7 550 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 NME9Q86XW9 330 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 THEMISQ8N1K5 641 aaPredicted RBP7.48□□□□□ -1.21
CYBB-201ENST00000378588 SLC26A8Q96RN1 970 aa7.48□□□□□ -1.21
CYBB-201ENST00000378588 ANKRD36BQ8N2N9 1353 aa7.47□□□□□ -1.21
CYBB-201ENST00000378588 BECN2A8MW95 431 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms