RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ATF3P18847 181 aa13.65□□□□□ -0.22
RPGR-203ENST00000378505 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
RPGR-203ENST00000378505 GRIN2AQ12879 1464 aa13.65□□□□□ -0.23
RPGR-203ENST00000378505 MBD3O95983 291 aa13.64□□□□□ -0.23
RPGR-203ENST00000378505 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
RPGR-203ENST00000378505 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
RPGR-203ENST00000378505 PSMA5P28066 241 aa13.64□□□□□ -0.23
RPGR-203ENST00000378505 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
RPGR-203ENST00000378505 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
RPGR-203ENST00000378505 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
RPGR-203ENST00000378505 G3V3G9 751 aa13.63□□□□□ -0.23
RPGR-203ENST00000378505 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
RPGR-203ENST00000378505 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
RPGR-203ENST00000378505 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
RPGR-203ENST00000378505 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
RPGR-203ENST00000378505 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
RPGR-203ENST00000378505 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
RPGR-203ENST00000378505 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
RPGR-203ENST00000378505 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
RPGR-203ENST00000378505 MARCH6O60337 910 aa13.62□□□□□ -0.23
RPGR-203ENST00000378505 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
RPGR-203ENST00000378505 RALYLQ86SE5 291 aaKnown RBP13.61□□□□□ -0.23
RPGR-203ENST00000378505 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
RPGR-203ENST00000378505 HIP1O00291 1037 aa13.61□□□□□ -0.23
RPGR-203ENST00000378505 TPM1P09493 284 aa13.61□□□□□ -0.23
RPGR-203ENST00000378505 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
RPGR-203ENST00000378505 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
RPGR-203ENST00000378505 CWC22Q9HCG8 908 aaKnown RBP13.61□□□□□ -0.23
RPGR-203ENST00000378505 PDCP20941 246 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
RPGR-203ENST00000378505 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
RPGR-203ENST00000378505 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 PES1O00541 588 aaKnown RBP13.6□□□□□ -0.23
RPGR-203ENST00000378505 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
RPGR-203ENST00000378505 SRCIN1Q9C0H9 1055 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 KIF14Q15058 1648 aa13.6□□□□□ -0.23
RPGR-203ENST00000378505 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
RPGR-203ENST00000378505 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
RPGR-203ENST00000378505 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
RPGR-203ENST00000378505 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
RPGR-203ENST00000378505 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
RPGR-203ENST00000378505 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
RPGR-203ENST00000378505 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
RPGR-203ENST00000378505 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
RPGR-203ENST00000378505 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
RPGR-203ENST00000378505 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 NUDT16Q96DE0 195 aaKnown RBP13.58□□□□□ -0.24
RPGR-203ENST00000378505 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
RPGR-203ENST00000378505 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPGR-203ENST00000378505 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
RPGR-203ENST00000378505 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
RPGR-203ENST00000378505 NOC3LQ8WTT2 800 aaKnown RBP13.57□□□□□ -0.24
RPGR-203ENST00000378505 ERICH2A1L162 156 aa13.57□□□□□ -0.24
RPGR-203ENST00000378505 ZNF530Q6P9A1 599 aaPredicted RBP13.57□□□□□ -0.24
RPGR-203ENST00000378505 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
RPGR-203ENST00000378505 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
RPGR-203ENST00000378505 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
RPGR-203ENST00000378505 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
RPGR-203ENST00000378505 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
RPGR-203ENST00000378505 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
RPGR-203ENST00000378505 MCM4P33991 863 aa13.56□□□□□ -0.24
RPGR-203ENST00000378505 CCDC39Q9UFE4 941 aa13.56□□□□□ -0.24
RPGR-203ENST00000378505 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
RPGR-203ENST00000378505 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
RPGR-203ENST00000378505 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
RPGR-203ENST00000378505 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
RPGR-203ENST00000378505 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
RPGR-203ENST00000378505 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
RPGR-203ENST00000378505 TATP17735 454 aaPredicted RBP13.55□□□□□ -0.24
RPGR-203ENST00000378505 TPM2P07951 284 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
RPGR-203ENST00000378505 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 FOSBP53539 338 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
RPGR-203ENST00000378505 CCDC27Q2M243 656 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 CCDC47Q96A33 483 aaKnown RBP13.54□□□□□ -0.24
RPGR-203ENST00000378505 CD109Q6YHK3 1445 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
RPGR-203ENST00000378505 ADGRL1O94910 1474 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 MSH5O43196 834 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
RPGR-203ENST00000378505 WDR33Q9C0J8 1336 aaKnown RBP13.53□□□□□ -0.24
RPGR-203ENST00000378505 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 FIBPO43427 364 aa13.53□□□□□ -0.24
RPGR-203ENST00000378505 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
RPGR-203ENST00000378505 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
RPGR-203ENST00000378505 IDI1Q13907 227 aa13.52□□□□□ -0.24
RPGR-203ENST00000378505 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms