RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
GNE-201ENST00000377902 ADGRB2O60241 1585 aa22.7■■□□□ 1.22
GNE-201ENST00000377902 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
GNE-201ENST00000377902 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
GNE-201ENST00000377902 A0A1W2PP64 1363 aa22.7■■□□□ 1.22
GNE-201ENST00000377902 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
GNE-201ENST00000377902 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
GNE-201ENST00000377902 HSCBQ8IWL3 235 aa22.68■■□□□ 1.22
GNE-201ENST00000377902 CT47B1P0C2W7 299 aaPredicted RBP22.67■■□□□ 1.22
GNE-201ENST00000377902 FBLN1P23142 703 aa22.67■■□□□ 1.22
GNE-201ENST00000377902 GLI2P10070 1586 aa22.67■■□□□ 1.22
GNE-201ENST00000377902 LMTK2Q8IWU2 1503 aa22.66■■□□□ 1.22
GNE-201ENST00000377902 FYB1O15117 783 aa22.65■■□□□ 1.22
GNE-201ENST00000377902 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
GNE-201ENST00000377902 NCBP3Q53F19 620 aaKnown RBP22.64■■□□□ 1.22
GNE-201ENST00000377902 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.22
GNE-201ENST00000377902 NSD2O96028 1365 aa22.64■■□□□ 1.21
GNE-201ENST00000377902 NUCB1Q02818 461 aa22.64■■□□□ 1.21
GNE-201ENST00000377902 MINK1Q8N4C8 1332 aaPredicted RBP22.63■■□□□ 1.21
GNE-201ENST00000377902 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
GNE-201ENST00000377902 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
GNE-201ENST00000377902 ABCC11Q96J66 1382 aa22.62■■□□□ 1.21
GNE-201ENST00000377902 ARHGEF28Q8N1W1 1705 aaKnown RBP22.61■■□□□ 1.21
GNE-201ENST00000377902 CHD1LQ86WJ1 897 aa22.61■■□□□ 1.21
GNE-201ENST00000377902 CD2BP2O95400 341 aaKnown RBP22.61■■□□□ 1.21
GNE-201ENST00000377902 COL3A1P02461 1466 aaPredicted RBP22.61■■□□□ 1.21
GNE-201ENST00000377902 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
GNE-201ENST00000377902 DDIT3P35638 169 aa22.6■■□□□ 1.21
GNE-201ENST00000377902 THUMPD2Q9BTF0 503 aaKnown RBP22.6■■□□□ 1.21
GNE-201ENST00000377902 RBM25P49756 843 aaKnown RBP22.6■■□□□ 1.21
GNE-201ENST00000377902 TNPO1Q92973 898 aaKnown RBP22.6■■□□□ 1.21
GNE-201ENST00000377902 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
GNE-201ENST00000377902 ANKRD45Q5TZF3 282 aa22.59■■□□□ 1.21
GNE-201ENST00000377902 DIAPH1O60610 1272 aaKnown RBP22.58■■□□□ 1.21
GNE-201ENST00000377902 PUS7Q96PZ0 661 aaKnown RBP22.58■■□□□ 1.21
GNE-201ENST00000377902 FRMPD1Q5SYB0 1578 aa22.58■■□□□ 1.21
GNE-201ENST00000377902 KIF2CQ99661 725 aa22.58■■□□□ 1.21
GNE-201ENST00000377902 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.21
GNE-201ENST00000377902 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
GNE-201ENST00000377902 IPO8O15397 1037 aaKnown RBP22.57■■□□□ 1.2
GNE-201ENST00000377902 GRPEL1Q9HAV7 217 aa22.57■■□□□ 1.2
GNE-201ENST00000377902 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
GNE-201ENST00000377902 HSP90AB1P08238 724 aaKnown RBP22.56■■□□□ 1.2
GNE-201ENST00000377902 IDI1Q13907 227 aa22.56■■□□□ 1.2
GNE-201ENST00000377902 IL16Q14005 1332 aa22.56■■□□□ 1.2
GNE-201ENST00000377902 MRE11P49959 708 aa22.56■■□□□ 1.2
GNE-201ENST00000377902 GAS2L3Q86XJ1 694 aa22.56■■□□□ 1.2
GNE-201ENST00000377902 UBE2Q2Q8WVN8 375 aa22.56■■□□□ 1.2
GNE-201ENST00000377902 NCOA3Q9Y6Q9 1424 aa22.55■■□□□ 1.2
GNE-201ENST00000377902 DDX11L8A8MPP1 907 aa22.55■■□□□ 1.2
GNE-201ENST00000377902 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
GNE-201ENST00000377902 SIGLEC1Q9BZZ2 1709 aa22.55■■□□□ 1.2
GNE-201ENST00000377902 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
GNE-201ENST00000377902 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
GNE-201ENST00000377902 SNX21Q969T3 373 aa22.54■■□□□ 1.2
GNE-201ENST00000377902 NAP1L5Q96NT1 182 aaPredicted RBP22.54■■□□□ 1.2
GNE-201ENST00000377902 ZBTB7BO15156 539 aaPredicted RBP22.53■■□□□ 1.2
GNE-201ENST00000377902 HMOX1P09601 288 aa22.53■■□□□ 1.2
GNE-201ENST00000377902 PPIP5K1Q6PFW1 1433 aa22.53■■□□□ 1.2
GNE-201ENST00000377902 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
GNE-201ENST00000377902 NEXMIFQ5QGS0 1516 aa22.53■■□□□ 1.2
GNE-201ENST00000377902 ABCC3O15438 1527 aa22.52■■□□□ 1.2
GNE-201ENST00000377902 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.52■■□□□ 1.2
GNE-201ENST00000377902 RAPGEF3O95398 923 aa22.52■■□□□ 1.2
GNE-201ENST00000377902 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
GNE-201ENST00000377902 BMP2KLQ5H9B9 411 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 ERBB4Q15303 1308 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 CLCN1P35523 988 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 ALDH1L2Q3SY69 923 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 CABP1Q9NZU7 370 aa22.51■■□□□ 1.19
GNE-201ENST00000377902 HSP90AA1P07900 732 aaKnown RBP22.5■■□□□ 1.19
GNE-201ENST00000377902 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
GNE-201ENST00000377902 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
GNE-201ENST00000377902 VAMP4O75379 141 aa22.48■■□□□ 1.19
GNE-201ENST00000377902 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
GNE-201ENST00000377902 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
GNE-201ENST00000377902 FCHSD2O94868 740 aa22.46■■□□□ 1.19
GNE-201ENST00000377902 CDK19Q9BWU1 502 aa22.46■■□□□ 1.19
GNE-201ENST00000377902 ATAD2Q6PL18 1390 aa22.46■■□□□ 1.19
GNE-201ENST00000377902 GAS2L2Q8NHY3 880 aa22.46■■□□□ 1.19
GNE-201ENST00000377902 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
GNE-201ENST00000377902 SSFA2P28290 1259 aa22.45■■□□□ 1.19
GNE-201ENST00000377902 POLKQ9UBT6 870 aa22.45■■□□□ 1.19
GNE-201ENST00000377902 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.19
GNE-201ENST00000377902 GBP4Q96PP9 640 aa22.45■■□□□ 1.18
GNE-201ENST00000377902 PTPRMP28827 1452 aa22.44■■□□□ 1.18
GNE-201ENST00000377902 HDGFL2Q7Z4V5 671 aaPredicted RBP22.44■■□□□ 1.18
GNE-201ENST00000377902 K7ELQ4 463 aaPredicted RBP22.44■■□□□ 1.18
GNE-201ENST00000377902 GCC1Q96CN9 775 aa22.44■■□□□ 1.18
GNE-201ENST00000377902 CFAP74Q9C0B2 1584 aa22.43■■□□□ 1.18
GNE-201ENST00000377902 ESPNB1AK53 854 aa22.43■■□□□ 1.18
GNE-201ENST00000377902 MLH3Q9UHC1 1453 aa22.43■■□□□ 1.18
GNE-201ENST00000377902 MBIPQ9NS73 344 aa22.43■■□□□ 1.18
GNE-201ENST00000377902 MED14O60244 1454 aa22.42■■□□□ 1.18
GNE-201ENST00000377902 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
GNE-201ENST00000377902 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms