RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
RNF38-206ENST00000377885 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
RNF38-206ENST00000377885 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
RNF38-206ENST00000377885 MCCP23508 829 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
RNF38-206ENST00000377885 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 IL16Q14005 1332 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
RNF38-206ENST00000377885 INTS3Q68E01 1043 aaKnown RBP12.32□□□□□ -0.44
RNF38-206ENST00000377885 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
RNF38-206ENST00000377885 STK26Q9P289 416 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 PLCH2O75038 1416 aa12.32□□□□□ -0.44
RNF38-206ENST00000377885 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
RNF38-206ENST00000377885 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
RNF38-206ENST00000377885 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
RNF38-206ENST00000377885 GGT6Q6P531 493 aa12.31□□□□□ -0.44
RNF38-206ENST00000377885 SSFA2P28290 1259 aa12.31□□□□□ -0.44
RNF38-206ENST00000377885 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
RNF38-206ENST00000377885 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
RNF38-206ENST00000377885 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
RNF38-206ENST00000377885 MADDQ8WXG6 1647 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 REC8O95072 547 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
RNF38-206ENST00000377885 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 TRPM2O94759 1503 aa12.3□□□□□ -0.44
RNF38-206ENST00000377885 PHF14O94880 888 aa12.29□□□□□ -0.44
RNF38-206ENST00000377885 GNAI1P63096 354 aa12.29□□□□□ -0.44
RNF38-206ENST00000377885 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
RNF38-206ENST00000377885 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
RNF38-206ENST00000377885 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
RNF38-206ENST00000377885 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
RNF38-206ENST00000377885 APBB1O00213 710 aa12.28□□□□□ -0.44
RNF38-206ENST00000377885 TBC1D9Q6ZT07 1266 aa12.28□□□□□ -0.44
RNF38-206ENST00000377885 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
RNF38-206ENST00000377885 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
RNF38-206ENST00000377885 TRAPPC8Q9Y2L5 1435 aa12.27□□□□□ -0.44
RNF38-206ENST00000377885 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.44
RNF38-206ENST00000377885 PRPF40AO75400 957 aaKnown RBP12.27□□□□□ -0.44
RNF38-206ENST00000377885 NLRP1Q9C000 1473 aa12.27□□□□□ -0.44
RNF38-206ENST00000377885 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.44
RNF38-206ENST00000377885 RBM10P98175 930 aaKnown RBP12.27□□□□□ -0.45
RNF38-206ENST00000377885 HMMRO75330 724 aa12.27□□□□□ -0.45
RNF38-206ENST00000377885 PTPRTO14522 1441 aa12.27□□□□□ -0.45
RNF38-206ENST00000377885 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
RNF38-206ENST00000377885 NOS1P29475 1434 aa12.27□□□□□ -0.45
RNF38-206ENST00000377885 CDC42BPBQ9Y5S2 1711 aa12.27□□□□□ -0.45
RNF38-206ENST00000377885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNF38-206ENST00000377885 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
RNF38-206ENST00000377885 OFD1O75665 1012 aa12.26□□□□□ -0.45
RNF38-206ENST00000377885 MBD3O95983 291 aa12.26□□□□□ -0.45
RNF38-206ENST00000377885 C14orf93Q9H972 538 aaKnown RBP12.26□□□□□ -0.45
RNF38-206ENST00000377885 HS1BP3Q53T59 392 aa12.26□□□□□ -0.45
RNF38-206ENST00000377885 ARID3AQ99856 593 aa12.26□□□□□ -0.45
RNF38-206ENST00000377885 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
RNF38-206ENST00000377885 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 FOXD4L5Q5VV16 416 aaPredicted RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 FOXD4L4Q8WXT5 416 aaPredicted RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 PHF23Q9BUL5 403 aaPredicted RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 UQCRHLA0A096LP55 91 aa12.25□□□□□ -0.45
RNF38-206ENST00000377885 FCHSD2O94868 740 aa12.25□□□□□ -0.45
RNF38-206ENST00000377885 UQCRHP07919 91 aa12.25□□□□□ -0.45
RNF38-206ENST00000377885 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
RNF38-206ENST00000377885 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
RNF38-206ENST00000377885 GAS2L3Q86XJ1 694 aa12.24□□□□□ -0.45
RNF38-206ENST00000377885 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
RNF38-206ENST00000377885 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
RNF38-206ENST00000377885 PPP1R9BQ96SB3 815 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 MCM5P33992 734 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 MYOM2P54296 1465 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 TERF1P54274 439 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
RNF38-206ENST00000377885 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
RNF38-206ENST00000377885 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
RNF38-206ENST00000377885 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
RNF38-206ENST00000377885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
RNF38-206ENST00000377885 FAM69CQ0P6D2 419 aa12.22□□□□□ -0.45
RNF38-206ENST00000377885 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
RNF38-206ENST00000377885 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
RNF38-206ENST00000377885 MCM2P49736 904 aa12.21□□□□□ -0.45
RNF38-206ENST00000377885 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
RNF38-206ENST00000377885 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
RNF38-206ENST00000377885 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
RNF38-206ENST00000377885 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
RNF38-206ENST00000377885 TSPY26PQ9H489 355 aa12.21□□□□□ -0.45
RNF38-206ENST00000377885 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.46
RNF38-206ENST00000377885 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.46
RNF38-206ENST00000377885 ZNF445P59923 1031 aa12.21□□□□□ -0.46
RNF38-206ENST00000377885 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 HMOX1P09601 288 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms