RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 A2ML1A8K2U0 1454 aa14.12□□□□□ -0.15
POLR1E-201ENST00000377792 TMPOP42166 694 aaKnown RBP14.11□□□□□ -0.15
POLR1E-201ENST00000377792 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
POLR1E-201ENST00000377792 TRIM35Q9UPQ4 493 aa14.1□□□□□ -0.15
POLR1E-201ENST00000377792 SPATA31D1Q6ZQQ2 1576 aa14.1□□□□□ -0.15
POLR1E-201ENST00000377792 PNPLA6Q8IY17 1366 aa14.1□□□□□ -0.15
POLR1E-201ENST00000377792 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
POLR1E-201ENST00000377792 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
POLR1E-201ENST00000377792 DLC1Q96QB1 1528 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 RIMS2Q9UQ26 1411 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 MAPK8IP3Q9UPT6 1336 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
POLR1E-201ENST00000377792 WAPLQ7Z5K2 1190 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
POLR1E-201ENST00000377792 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
POLR1E-201ENST00000377792 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
POLR1E-201ENST00000377792 IL16Q14005 1332 aa14.07□□□□□ -0.16
POLR1E-201ENST00000377792 EXOSC9Q06265 439 aaKnown RBP14.07□□□□□ -0.16
POLR1E-201ENST00000377792 MLECQ14165 292 aa14.07□□□□□ -0.16
POLR1E-201ENST00000377792 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
POLR1E-201ENST00000377792 PPM1GO15355 546 aaPredicted RBP14.06□□□□□ -0.16
POLR1E-201ENST00000377792 ZKSCAN2Q63HK3 967 aa14.06□□□□□ -0.16
POLR1E-201ENST00000377792 ATP7BP35670 1465 aa14.06□□□□□ -0.16
POLR1E-201ENST00000377792 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
POLR1E-201ENST00000377792 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
POLR1E-201ENST00000377792 RIPK4P57078 832 aa14.05□□□□□ -0.16
POLR1E-201ENST00000377792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
POLR1E-201ENST00000377792 DZIP1LQ8IYY4 767 aaKnown RBP14.05□□□□□ -0.16
POLR1E-201ENST00000377792 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
POLR1E-201ENST00000377792 NEFMP07197 916 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
POLR1E-201ENST00000377792 FCHSD2O94868 740 aa14.03□□□□□ -0.16
POLR1E-201ENST00000377792 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
POLR1E-201ENST00000377792 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
POLR1E-201ENST00000377792 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
POLR1E-201ENST00000377792 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
POLR1E-201ENST00000377792 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
POLR1E-201ENST00000377792 FBLN1P23142 703 aa14.02□□□□□ -0.16
POLR1E-201ENST00000377792 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.16
POLR1E-201ENST00000377792 METP08581 1390 aa14.02□□□□□ -0.17
POLR1E-201ENST00000377792 WASLO00401 505 aaPredicted RBP14.02□□□□□ -0.17
POLR1E-201ENST00000377792 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.17
POLR1E-201ENST00000377792 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
POLR1E-201ENST00000377792 CPSF1Q10570 1443 aaKnown RBP14.01□□□□□ -0.17
POLR1E-201ENST00000377792 USP19O94966 1318 aa14.01□□□□□ -0.17
POLR1E-201ENST00000377792 TRIM27P14373 513 aa14.01□□□□□ -0.17
POLR1E-201ENST00000377792 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
POLR1E-201ENST00000377792 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
POLR1E-201ENST00000377792 FAM135BQ49AJ0 1406 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 ZMYM3Q14202 1370 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 PRKAR2BP31323 418 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 ATF7IPQ6VMQ6 1270 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
POLR1E-201ENST00000377792 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
POLR1E-201ENST00000377792 SEC24BO95487 1268 aa13.99□□□□□ -0.17
POLR1E-201ENST00000377792 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
POLR1E-201ENST00000377792 NOB1Q9ULX3 412 aaKnown RBP13.99□□□□□ -0.17
POLR1E-201ENST00000377792 SIRT1Q96EB6 747 aa13.98□□□□□ -0.17
POLR1E-201ENST00000377792 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
POLR1E-201ENST00000377792 NME9Q86XW9 330 aa13.98□□□□□ -0.17
POLR1E-201ENST00000377792 DDX19BQ9UMR2 479 aa13.98□□□□□ -0.17
POLR1E-201ENST00000377792 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
POLR1E-201ENST00000377792 ITPRIPQ8IWB1 547 aa13.97□□□□□ -0.17
POLR1E-201ENST00000377792 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
POLR1E-201ENST00000377792 VIRMAQ69YN4 1812 aaKnown RBP13.97□□□□□ -0.17
POLR1E-201ENST00000377792 IL13P35225 146 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
POLR1E-201ENST00000377792 NFE2L2Q16236 605 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 KIF16BQ96L93 1317 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 TECPR2O15040 1411 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 HMOX1P09601 288 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
POLR1E-201ENST00000377792 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
POLR1E-201ENST00000377792 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
POLR1E-201ENST00000377792 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
POLR1E-201ENST00000377792 CCDC61Q9Y6R9 512 aa13.95□□□□□ -0.18
POLR1E-201ENST00000377792 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
POLR1E-201ENST00000377792 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
POLR1E-201ENST00000377792 TNRQ92752 1358 aa13.94□□□□□ -0.18
POLR1E-201ENST00000377792 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
POLR1E-201ENST00000377792 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
POLR1E-201ENST00000377792 COG3Q96JB2 828 aa13.94□□□□□ -0.18
POLR1E-201ENST00000377792 ZBTB40Q9NUA8 1239 aa13.94□□□□□ -0.18
POLR1E-201ENST00000377792 CPS1P31327 1500 aa13.93□□□□□ -0.18
POLR1E-201ENST00000377792 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
POLR1E-201ENST00000377792 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
POLR1E-201ENST00000377792 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
POLR1E-201ENST00000377792 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
POLR1E-201ENST00000377792 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
POLR1E-201ENST00000377792 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms