RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
ZKSCAN4-201ENST00000377294 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
ZKSCAN4-201ENST00000377294 SEC24BO95487 1268 aa18.68■□□□□ 0.58
ZKSCAN4-201ENST00000377294 ARHGEF40Q8TER5 1519 aa18.68■□□□□ 0.58
ZKSCAN4-201ENST00000377294 NEFMP07197 916 aa18.68■□□□□ 0.58
ZKSCAN4-201ENST00000377294 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
ZKSCAN4-201ENST00000377294 HDGFL2Q7Z4V5 671 aaPredicted RBP18.67■□□□□ 0.58
ZKSCAN4-201ENST00000377294 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
ZKSCAN4-201ENST00000377294 A2ML1A8K2U0 1454 aa18.66■□□□□ 0.58
ZKSCAN4-201ENST00000377294 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
ZKSCAN4-201ENST00000377294 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
ZKSCAN4-201ENST00000377294 NINLQ9Y2I6 1382 aa18.65■□□□□ 0.58
ZKSCAN4-201ENST00000377294 RIMS2Q9UQ26 1411 aa18.65■□□□□ 0.58
ZKSCAN4-201ENST00000377294 RIPK4P57078 832 aa18.64■□□□□ 0.58
ZKSCAN4-201ENST00000377294 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
ZKSCAN4-201ENST00000377294 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.57
ZKSCAN4-201ENST00000377294 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
ZKSCAN4-201ENST00000377294 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
ZKSCAN4-201ENST00000377294 HMOX1P09601 288 aa18.63■□□□□ 0.57
ZKSCAN4-201ENST00000377294 TXNDC2Q86VQ3 553 aa18.63■□□□□ 0.57
ZKSCAN4-201ENST00000377294 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
ZKSCAN4-201ENST00000377294 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
ZKSCAN4-201ENST00000377294 METP08581 1390 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 SETD1AO15047 1707 aaKnown RBP18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 USP19O94966 1318 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 NME9Q86XW9 330 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 POLKQ9UBT6 870 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
ZKSCAN4-201ENST00000377294 TRIM27P14373 513 aa18.6■□□□□ 0.57
ZKSCAN4-201ENST00000377294 MVPQ14764 893 aaKnown RBP18.6■□□□□ 0.57
ZKSCAN4-201ENST00000377294 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
ZKSCAN4-201ENST00000377294 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
ZKSCAN4-201ENST00000377294 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
ZKSCAN4-201ENST00000377294 DZIP1LQ8IYY4 767 aaKnown RBP18.59■□□□□ 0.57
ZKSCAN4-201ENST00000377294 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
ZKSCAN4-201ENST00000377294 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.57
ZKSCAN4-201ENST00000377294 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.56
ZKSCAN4-201ENST00000377294 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
ZKSCAN4-201ENST00000377294 MED14O60244 1454 aa18.58■□□□□ 0.56
ZKSCAN4-201ENST00000377294 NRXN3Q9Y4C0 1643 aa18.58■□□□□ 0.56
ZKSCAN4-201ENST00000377294 PNPLA6Q8IY17 1366 aa18.57■□□□□ 0.56
ZKSCAN4-201ENST00000377294 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
ZKSCAN4-201ENST00000377294 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
ZKSCAN4-201ENST00000377294 MAP2P11137 1827 aaKnown RBP18.57■□□□□ 0.56
ZKSCAN4-201ENST00000377294 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
ZKSCAN4-201ENST00000377294 DAXXQ9UER7 740 aaPredicted RBP18.56■□□□□ 0.56
ZKSCAN4-201ENST00000377294 PPIP5K1Q6PFW1 1433 aa18.56■□□□□ 0.56
ZKSCAN4-201ENST00000377294 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
ZKSCAN4-201ENST00000377294 AGLP35573 1532 aa18.55■□□□□ 0.56
ZKSCAN4-201ENST00000377294 NUTM2FA1L443 756 aa18.55■□□□□ 0.56
ZKSCAN4-201ENST00000377294 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
ZKSCAN4-201ENST00000377294 TMEM57Q8N5G2 664 aa18.54■□□□□ 0.56
ZKSCAN4-201ENST00000377294 REREQ9P2R6 1566 aa18.53■□□□□ 0.56
ZKSCAN4-201ENST00000377294 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
ZKSCAN4-201ENST00000377294 NFKBIBQ15653 356 aa18.52■□□□□ 0.56
ZKSCAN4-201ENST00000377294 ATF7IPQ6VMQ6 1270 aa18.52■□□□□ 0.56
ZKSCAN4-201ENST00000377294 CPS1P31327 1500 aa18.52■□□□□ 0.56
ZKSCAN4-201ENST00000377294 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
ZKSCAN4-201ENST00000377294 ZMYM3Q14202 1370 aa18.52■□□□□ 0.55
ZKSCAN4-201ENST00000377294 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.55
ZKSCAN4-201ENST00000377294 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.55
ZKSCAN4-201ENST00000377294 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.55
ZKSCAN4-201ENST00000377294 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
ZKSCAN4-201ENST00000377294 ATP7BP35670 1465 aa18.51■□□□□ 0.55
ZKSCAN4-201ENST00000377294 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
ZKSCAN4-201ENST00000377294 FCHSD2O94868 740 aa18.5■□□□□ 0.55
ZKSCAN4-201ENST00000377294 TSPYL6Q8N831 410 aa18.5■□□□□ 0.55
ZKSCAN4-201ENST00000377294 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
ZKSCAN4-201ENST00000377294 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
ZKSCAN4-201ENST00000377294 FAM83GA6ND36 823 aa18.48■□□□□ 0.55
ZKSCAN4-201ENST00000377294 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
ZKSCAN4-201ENST00000377294 IL13P35225 146 aa18.48■□□□□ 0.55
ZKSCAN4-201ENST00000377294 IL16Q14005 1332 aa18.47■□□□□ 0.55
ZKSCAN4-201ENST00000377294 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
ZKSCAN4-201ENST00000377294 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
ZKSCAN4-201ENST00000377294 CT47B1P0C2W7 299 aaPredicted RBP18.47■□□□□ 0.55
ZKSCAN4-201ENST00000377294 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
ZKSCAN4-201ENST00000377294 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
ZKSCAN4-201ENST00000377294 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
ZKSCAN4-201ENST00000377294 NFE2L2Q16236 605 aa18.46■□□□□ 0.55
ZKSCAN4-201ENST00000377294 C1orf115Q9H7X2 142 aa18.46■□□□□ 0.55
ZKSCAN4-201ENST00000377294 SOX12O15370 315 aa18.45■□□□□ 0.54
ZKSCAN4-201ENST00000377294 FRAT2O75474 233 aaPredicted RBP18.45■□□□□ 0.54
ZKSCAN4-201ENST00000377294 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
ZKSCAN4-201ENST00000377294 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
ZKSCAN4-201ENST00000377294 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
ZKSCAN4-201ENST00000377294 AAMPQ13685 434 aa18.44■□□□□ 0.54
ZKSCAN4-201ENST00000377294 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
ZKSCAN4-201ENST00000377294 COG3Q96JB2 828 aa18.44■□□□□ 0.54
ZKSCAN4-201ENST00000377294 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
ZKSCAN4-201ENST00000377294 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
ZKSCAN4-201ENST00000377294 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
ZKSCAN4-201ENST00000377294 ZBTB40Q9NUA8 1239 aa18.43■□□□□ 0.54
ZKSCAN4-201ENST00000377294 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
ZKSCAN4-201ENST00000377294 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
ZKSCAN4-201ENST00000377294 TNRQ92752 1358 aa18.42■□□□□ 0.54
ZKSCAN4-201ENST00000377294 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
ZKSCAN4-201ENST00000377294 VAMP4O75379 141 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms