RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NUCB1Q02818 461 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 FOXD4L1Q9NU39 408 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 TRIM35Q9UPQ4 493 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 GBP4Q96PP9 640 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
TRIM39-201ENST00000376656 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
TRIM39-201ENST00000376656 CIZ1Q9ULV3 898 aaPredicted RBP20.68■□□□□ 0.9
TRIM39-201ENST00000376656 CD2BP2O95400 341 aaKnown RBP20.68■□□□□ 0.9
TRIM39-201ENST00000376656 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
TRIM39-201ENST00000376656 U2SURPO15042 1029 aaKnown RBP20.67■□□□□ 0.9
TRIM39-201ENST00000376656 KIF2CQ99661 725 aa20.67■□□□□ 0.9
TRIM39-201ENST00000376656 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
TRIM39-201ENST00000376656 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
TRIM39-201ENST00000376656 PKNOX2Q96KN3 472 aa20.66■□□□□ 0.9
TRIM39-201ENST00000376656 CHD1LQ86WJ1 897 aa20.65■□□□□ 0.9
TRIM39-201ENST00000376656 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
TRIM39-201ENST00000376656 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
TRIM39-201ENST00000376656 SKOR2Q2VWA4 1001 aaPredicted RBP20.64■□□□□ 0.89
TRIM39-201ENST00000376656 ADGRB1O14514 1584 aa20.64■□□□□ 0.89
TRIM39-201ENST00000376656 PPRC1Q5VV67 1664 aaKnown RBP20.63■□□□□ 0.89
TRIM39-201ENST00000376656 ADGRB3O60242 1522 aa20.62■□□□□ 0.89
TRIM39-201ENST00000376656 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
TRIM39-201ENST00000376656 ANKRD36BQ8N2N9 1353 aa20.62■□□□□ 0.89
TRIM39-201ENST00000376656 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
TRIM39-201ENST00000376656 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
TRIM39-201ENST00000376656 ZMYND15Q9H091 742 aa20.61■□□□□ 0.89
TRIM39-201ENST00000376656 NSD2O96028 1365 aa20.61■□□□□ 0.89
TRIM39-201ENST00000376656 SSFA2P28290 1259 aa20.61■□□□□ 0.89
TRIM39-201ENST00000376656 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
TRIM39-201ENST00000376656 CFAP74Q9C0B2 1584 aa20.6■□□□□ 0.89
TRIM39-201ENST00000376656 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
TRIM39-201ENST00000376656 IPO8O15397 1037 aaKnown RBP20.6■□□□□ 0.89
TRIM39-201ENST00000376656 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
TRIM39-201ENST00000376656 RIPK4P57078 832 aa20.59■□□□□ 0.89
TRIM39-201ENST00000376656 ANKRD45Q5TZF3 282 aa20.59■□□□□ 0.89
TRIM39-201ENST00000376656 CABP2Q9NPB3 220 aa20.59■□□□□ 0.89
TRIM39-201ENST00000376656 IL16Q14005 1332 aa20.59■□□□□ 0.89
TRIM39-201ENST00000376656 GAS2L2Q8NHY3 880 aa20.58■□□□□ 0.89
TRIM39-201ENST00000376656 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.89
TRIM39-201ENST00000376656 EVC2Q86UK5 1308 aa20.58■□□□□ 0.88
TRIM39-201ENST00000376656 PPLO60437 1756 aa20.58■□□□□ 0.88
TRIM39-201ENST00000376656 PTMSP20962 102 aa20.58■□□□□ 0.88
TRIM39-201ENST00000376656 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.88
TRIM39-201ENST00000376656 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.88
TRIM39-201ENST00000376656 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
TRIM39-201ENST00000376656 FANCAO15360 1455 aa20.57■□□□□ 0.88
TRIM39-201ENST00000376656 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
TRIM39-201ENST00000376656 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
TRIM39-201ENST00000376656 NASPP49321 788 aaPredicted RBP20.56■□□□□ 0.88
TRIM39-201ENST00000376656 CCDC173Q0VFZ6 552 aa20.56■□□□□ 0.88
TRIM39-201ENST00000376656 PPIP5K1Q6PFW1 1433 aa20.56■□□□□ 0.88
TRIM39-201ENST00000376656 PPP1R9BQ96SB3 815 aa20.55■□□□□ 0.88
TRIM39-201ENST00000376656 TPM2P07951 284 aa20.55■□□□□ 0.88
TRIM39-201ENST00000376656 UHRF1BP1LA0JNW5 1464 aa20.54■□□□□ 0.88
TRIM39-201ENST00000376656 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRIM39-201ENST00000376656 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
TRIM39-201ENST00000376656 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
TRIM39-201ENST00000376656 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
TRIM39-201ENST00000376656 DDX49Q9Y6V7 483 aaKnown RBP20.53■□□□□ 0.88
TRIM39-201ENST00000376656 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
TRIM39-201ENST00000376656 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
TRIM39-201ENST00000376656 BAG4O95429 457 aaKnown RBP20.53■□□□□ 0.88
TRIM39-201ENST00000376656 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
TRIM39-201ENST00000376656 GLI2P10070 1586 aa20.52■□□□□ 0.88
TRIM39-201ENST00000376656 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.88
TRIM39-201ENST00000376656 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
TRIM39-201ENST00000376656 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.87
TRIM39-201ENST00000376656 KLHL40Q2TBA0 621 aa20.52■□□□□ 0.87
TRIM39-201ENST00000376656 GCC1Q96CN9 775 aa20.52■□□□□ 0.87
TRIM39-201ENST00000376656 MED14O60244 1454 aa20.51■□□□□ 0.87
TRIM39-201ENST00000376656 ZSCAN30Q86W11 494 aa20.51■□□□□ 0.87
TRIM39-201ENST00000376656 CLEC17AQ6ZS10 378 aa20.51■□□□□ 0.87
TRIM39-201ENST00000376656 ARHGEF28Q8N1W1 1705 aaKnown RBP20.5■□□□□ 0.87
TRIM39-201ENST00000376656 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
TRIM39-201ENST00000376656 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
TRIM39-201ENST00000376656 NPATQ14207 1427 aa20.49■□□□□ 0.87
TRIM39-201ENST00000376656 IBTKQ9P2D0 1353 aaPredicted RBP20.48■□□□□ 0.87
TRIM39-201ENST00000376656 ANP32BQ92688 251 aaKnown RBP20.48■□□□□ 0.87
TRIM39-201ENST00000376656 FYB1O15117 783 aa20.47■□□□□ 0.87
TRIM39-201ENST00000376656 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
TRIM39-201ENST00000376656 MCTP1Q6DN14 999 aa20.47■□□□□ 0.87
TRIM39-201ENST00000376656 CDC45O75419 566 aa20.46■□□□□ 0.87
TRIM39-201ENST00000376656 OFD1O75665 1012 aa20.46■□□□□ 0.87
TRIM39-201ENST00000376656 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
TRIM39-201ENST00000376656 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 GSPT1P15170 499 aaKnown RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 MSNP26038 577 aaKnown RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 NCLP19338 710 aaKnown RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-201ENST00000376656 PDCL3Q9H2J4 239 aa20.45■□□□□ 0.86
TRIM39-201ENST00000376656 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
TRIM39-201ENST00000376656 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
TRIM39-201ENST00000376656 ZNF445P59923 1031 aa20.44■□□□□ 0.86
TRIM39-201ENST00000376656 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
TRIM39-201ENST00000376656 VAMP4O75379 141 aa20.43■□□□□ 0.86
TRIM39-201ENST00000376656 TSPYL6Q8N831 410 aa20.43■□□□□ 0.86
TRIM39-201ENST00000376656 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms