RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 RRAGDQ9NQL2 400 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 ADGRL1O94910 1474 aa17.79■□□□□ 0.44
TNFRSF1B-201ENST00000376259 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1B-201ENST00000376259 SAMD9LQ8IVG5 1584 aa17.78■□□□□ 0.44
TNFRSF1B-201ENST00000376259 USP19O94966 1318 aa17.78■□□□□ 0.44
TNFRSF1B-201ENST00000376259 GNAI1P63096 354 aa17.78■□□□□ 0.44
TNFRSF1B-201ENST00000376259 FANCAO15360 1455 aa17.77■□□□□ 0.44
TNFRSF1B-201ENST00000376259 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.44
TNFRSF1B-201ENST00000376259 DUOX2Q9NRD8 1548 aa17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 MRE11P49959 708 aa17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 F6X3S4 739 aa17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 PRPF40AO75400 957 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-201ENST00000376259 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
TNFRSF1B-201ENST00000376259 AMPHP49418 695 aa17.75■□□□□ 0.43
TNFRSF1B-201ENST00000376259 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1B-201ENST00000376259 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
TNFRSF1B-201ENST00000376259 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1B-201ENST00000376259 CDC45O75419 566 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 DTNBO60941 627 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 KCNJ4P48050 445 aa17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 FKBP5Q13451 457 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 API5Q9BZZ5 524 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-201ENST00000376259 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 CDC42BPAQ5VT25 1732 aa17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 ST18O60284 1047 aa17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
TNFRSF1B-201ENST00000376259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1B-201ENST00000376259 K7ELQ4 463 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1B-201ENST00000376259 NEK4P51957 841 aa17.72■□□□□ 0.43
TNFRSF1B-201ENST00000376259 NINLQ9Y2I6 1382 aa17.72■□□□□ 0.43
TNFRSF1B-201ENST00000376259 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 MBIPQ9NS73 344 aa17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 AAMPQ13685 434 aa17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 TSPYL4Q9UJ04 414 aa17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
TNFRSF1B-201ENST00000376259 AEBP1Q8IUX7 1158 aa17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 FCHSD2O94868 740 aa17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ZBTB40Q9NUA8 1239 aa17.7■□□□□ 0.42
TNFRSF1B-201ENST00000376259 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1B-201ENST00000376259 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ESPNB1AK53 854 aa17.69■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ABCA8O94911 1581 aa17.69■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ATP10AO60312 1499 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 HMMRO75330 724 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 IL1RAPL2Q9NP60 686 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 FAM13BQ9NYF5 915 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 PTPRTO14522 1441 aa17.68■□□□□ 0.42
TNFRSF1B-201ENST00000376259 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 INSRP06213 1382 aa17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 NUCB1Q02818 461 aa17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 INTS3Q68E01 1043 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 NAP1L2Q9ULW6 460 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
TNFRSF1B-201ENST00000376259 ERVK-7P63135 1459 aa17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 MCCP23508 829 aa17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 DDX54Q8TDD1 881 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 RBM27Q9P2N5 1060 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 GDPD2Q9HCC8 539 aa17.66■□□□□ 0.42
TNFRSF1B-201ENST00000376259 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
TNFRSF1B-201ENST00000376259 R3HCC1Q9Y3T6 440 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1B-201ENST00000376259 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.42
TNFRSF1B-201ENST00000376259 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.42
TNFRSF1B-201ENST00000376259 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF1B-201ENST00000376259 VAMP4O75379 141 aa17.64■□□□□ 0.41
TNFRSF1B-201ENST00000376259 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
TNFRSF1B-201ENST00000376259 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
TNFRSF1B-201ENST00000376259 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1B-201ENST00000376259 MEIS3Q99687 375 aa17.63■□□□□ 0.41
TNFRSF1B-201ENST00000376259 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
TNFRSF1B-201ENST00000376259 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1B-201ENST00000376259 REC8O95072 547 aa17.62■□□□□ 0.41
TNFRSF1B-201ENST00000376259 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms