RNA–Protein interactions for RNA: ENST00000374595.8

CTNNAL1-204, Transcript of catenin alpha like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTNNAL1, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-204ENST00000374595 TRIM35Q9UPQ4 493 aa22.35■■□□□ 1.17
CTNNAL1-204ENST00000374595 AGLP35573 1532 aa22.35■■□□□ 1.17
CTNNAL1-204ENST00000374595 MAPK8IP3Q9UPT6 1336 aa22.35■■□□□ 1.17
CTNNAL1-204ENST00000374595 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
CTNNAL1-204ENST00000374595 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
CTNNAL1-204ENST00000374595 SPATA31D1Q6ZQQ2 1576 aa22.34■■□□□ 1.17
CTNNAL1-204ENST00000374595 CCDC27Q2M243 656 aa22.34■■□□□ 1.17
CTNNAL1-204ENST00000374595 NME9Q86XW9 330 aa22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 COL3A1P02461 1466 aaPredicted RBP22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 HMOX1P09601 288 aa22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 RIPK4P57078 832 aa22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
CTNNAL1-204ENST00000374595 MYH16Q9H6N6 1097 aa22.32■■□□□ 1.16
CTNNAL1-204ENST00000374595 EMILIN1Q9Y6C2 1016 aa22.32■■□□□ 1.16
CTNNAL1-204ENST00000374595 C8orf34Q49A92 452 aa22.31■■□□□ 1.16
CTNNAL1-204ENST00000374595 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
CTNNAL1-204ENST00000374595 SLC4A3P48751 1232 aa22.31■■□□□ 1.16
CTNNAL1-204ENST00000374595 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
CTNNAL1-204ENST00000374595 CEBPAP49715 358 aaPredicted RBP22.3■■□□□ 1.16
CTNNAL1-204ENST00000374595 PCDHB15Q9Y5E8 787 aa22.3■■□□□ 1.16
CTNNAL1-204ENST00000374595 WASLO00401 505 aaPredicted RBP22.3■■□□□ 1.16
CTNNAL1-204ENST00000374595 REREQ9P2R6 1566 aa22.3■■□□□ 1.16
CTNNAL1-204ENST00000374595 KIF13AQ9H1H9 1805 aa22.3■■□□□ 1.16
CTNNAL1-204ENST00000374595 PRKAR2BP31323 418 aa22.28■■□□□ 1.16
CTNNAL1-204ENST00000374595 SETD1AO15047 1707 aaKnown RBP22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 PPIP5K1Q6PFW1 1433 aa22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 THUMPD2Q9BTF0 503 aaKnown RBP22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 ADGRB2O60241 1585 aa22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 NUDT16Q96DE0 195 aaKnown RBP22.27■■□□□ 1.16
CTNNAL1-204ENST00000374595 PHACTR3Q96KR7 559 aa22.26■■□□□ 1.15
CTNNAL1-204ENST00000374595 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
CTNNAL1-204ENST00000374595 NRXN3Q9Y4C0 1643 aa22.26■■□□□ 1.15
CTNNAL1-204ENST00000374595 SSH1Q8WYL5 1049 aa22.25■■□□□ 1.15
CTNNAL1-204ENST00000374595 ANKRD26Q9UPS8 1709 aa22.24■■□□□ 1.15
CTNNAL1-204ENST00000374595 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
CTNNAL1-204ENST00000374595 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
CTNNAL1-204ENST00000374595 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
CTNNAL1-204ENST00000374595 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
CTNNAL1-204ENST00000374595 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
CTNNAL1-204ENST00000374595 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
CTNNAL1-204ENST00000374595 TNRQ92752 1358 aa22.22■■□□□ 1.15
CTNNAL1-204ENST00000374595 MED14O60244 1454 aa22.22■■□□□ 1.15
CTNNAL1-204ENST00000374595 LTKP29376 864 aa22.21■■□□□ 1.15
CTNNAL1-204ENST00000374595 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
CTNNAL1-204ENST00000374595 ZKSCAN2Q63HK3 967 aa22.2■■□□□ 1.14
CTNNAL1-204ENST00000374595 DLC1Q96QB1 1528 aa22.2■■□□□ 1.14
CTNNAL1-204ENST00000374595 PRR36Q9H6K5 1346 aa22.2■■□□□ 1.14
CTNNAL1-204ENST00000374595 TRIM27P14373 513 aa22.2■■□□□ 1.14
CTNNAL1-204ENST00000374595 LRRC7Q96NW7 1537 aa22.19■■□□□ 1.14
CTNNAL1-204ENST00000374595 SOX12O15370 315 aa22.19■■□□□ 1.14
CTNNAL1-204ENST00000374595 DZIP1LQ8IYY4 767 aaKnown RBP22.19■■□□□ 1.14
CTNNAL1-204ENST00000374595 NOB1Q9ULX3 412 aaKnown RBP22.19■■□□□ 1.14
CTNNAL1-204ENST00000374595 CCDC61Q9Y6R9 512 aa22.19■■□□□ 1.14
CTNNAL1-204ENST00000374595 ROBO2Q9HCK4 1378 aa22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 ATP7BP35670 1465 aa22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 FCHSD2O94868 740 aa22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 SEC24BO95487 1268 aa22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 CPS1P31327 1500 aa22.18■■□□□ 1.14
CTNNAL1-204ENST00000374595 ITPRIPQ8IWB1 547 aa22.17■■□□□ 1.14
CTNNAL1-204ENST00000374595 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
CTNNAL1-204ENST00000374595 TMEM2Q9UHN6 1383 aa22.16■■□□□ 1.14
CTNNAL1-204ENST00000374595 COG3Q96JB2 828 aa22.16■■□□□ 1.14
CTNNAL1-204ENST00000374595 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.14
CTNNAL1-204ENST00000374595 PDZRN3Q9UPQ7 1066 aa22.14■■□□□ 1.14
CTNNAL1-204ENST00000374595 FAM83GA6ND36 823 aa22.14■■□□□ 1.13
CTNNAL1-204ENST00000374595 IL13P35225 146 aa22.14■■□□□ 1.13
CTNNAL1-204ENST00000374595 NEFMP07197 916 aa22.13■■□□□ 1.13
CTNNAL1-204ENST00000374595 HDGFP51858 240 aaKnown RBP22.13■■□□□ 1.13
CTNNAL1-204ENST00000374595 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
CTNNAL1-204ENST00000374595 PMFBP1Q8TBY8 1022 aa22.13■■□□□ 1.13
CTNNAL1-204ENST00000374595 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
CTNNAL1-204ENST00000374595 ATF7IPQ6VMQ6 1270 aa22.12■■□□□ 1.13
CTNNAL1-204ENST00000374595 TMEM57Q8N5G2 664 aa22.12■■□□□ 1.13
CTNNAL1-204ENST00000374595 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
CTNNAL1-204ENST00000374595 FAM135BQ49AJ0 1406 aa22.12■■□□□ 1.13
CTNNAL1-204ENST00000374595 DEKP35659 375 aaKnown RBP22.11■■□□□ 1.13
CTNNAL1-204ENST00000374595 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
CTNNAL1-204ENST00000374595 ADAMTS13Q76LX8 1427 aa22.1■■□□□ 1.13
CTNNAL1-204ENST00000374595 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
CTNNAL1-204ENST00000374595 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
CTNNAL1-204ENST00000374595 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
CTNNAL1-204ENST00000374595 ACEP12821 1306 aa22.08■■□□□ 1.13
CTNNAL1-204ENST00000374595 IL16Q14005 1332 aa22.08■■□□□ 1.13
CTNNAL1-204ENST00000374595 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
CTNNAL1-204ENST00000374595 DDRGK1Q96HY6 314 aa22.08■■□□□ 1.13
CTNNAL1-204ENST00000374595 RWDD1Q9H446 243 aaPredicted RBP22.08■■□□□ 1.13
CTNNAL1-204ENST00000374595 CT47B1P0C2W7 299 aaPredicted RBP22.07■■□□□ 1.12
CTNNAL1-204ENST00000374595 CDC42BPGQ6DT37 1551 aa22.06■■□□□ 1.12
CTNNAL1-204ENST00000374595 DAXXQ9UER7 740 aaPredicted RBP22.06■■□□□ 1.12
CTNNAL1-204ENST00000374595 USP19O94966 1318 aa22.05■■□□□ 1.12
CTNNAL1-204ENST00000374595 MBIPQ9NS73 344 aa22.05■■□□□ 1.12
CTNNAL1-204ENST00000374595 TECPR2O15040 1411 aa22.04■■□□□ 1.12
CTNNAL1-204ENST00000374595 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
CTNNAL1-204ENST00000374595 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
CTNNAL1-204ENST00000374595 DDX19BQ9UMR2 479 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms