RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 COL16A1Q07092 1604 aaPredicted RBP13.7□□□□□ -0.22
PDZD11-202ENST00000374454 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
PDZD11-202ENST00000374454 PHLPP1O60346 1717 aa13.7□□□□□ -0.22
PDZD11-202ENST00000374454 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
PDZD11-202ENST00000374454 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
PDZD11-202ENST00000374454 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
PDZD11-202ENST00000374454 JCADQ9P266 1359 aa13.69□□□□□ -0.22
PDZD11-202ENST00000374454 MYOM1P52179 1685 aa13.69□□□□□ -0.22
PDZD11-202ENST00000374454 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
PDZD11-202ENST00000374454 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
PDZD11-202ENST00000374454 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
PDZD11-202ENST00000374454 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
PDZD11-202ENST00000374454 PER1O15534 1290 aaPredicted RBP13.66□□□□□ -0.22
PDZD11-202ENST00000374454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDZD11-202ENST00000374454 MON2Q7Z3U7 1717 aa13.66□□□□□ -0.22
PDZD11-202ENST00000374454 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
PDZD11-202ENST00000374454 NSD3Q9BZ95 1437 aa13.65□□□□□ -0.22
PDZD11-202ENST00000374454 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
PDZD11-202ENST00000374454 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
PDZD11-202ENST00000374454 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PDZD11-202ENST00000374454 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
PDZD11-202ENST00000374454 FYB1O15117 783 aa13.64□□□□□ -0.23
PDZD11-202ENST00000374454 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
PDZD11-202ENST00000374454 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
PDZD11-202ENST00000374454 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
PDZD11-202ENST00000374454 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
PDZD11-202ENST00000374454 NLRP6P59044 892 aa13.63□□□□□ -0.23
PDZD11-202ENST00000374454 NME9Q86XW9 330 aa13.63□□□□□ -0.23
PDZD11-202ENST00000374454 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
PDZD11-202ENST00000374454 USP19O94966 1318 aa13.62□□□□□ -0.23
PDZD11-202ENST00000374454 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
PDZD11-202ENST00000374454 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
PDZD11-202ENST00000374454 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
PDZD11-202ENST00000374454 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
PDZD11-202ENST00000374454 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
PDZD11-202ENST00000374454 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
PDZD11-202ENST00000374454 COG3Q96JB2 828 aa13.6□□□□□ -0.23
PDZD11-202ENST00000374454 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
PDZD11-202ENST00000374454 NSD2O96028 1365 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
PDZD11-202ENST00000374454 OVOS2A0A0J9YW53 1432 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 OVOS2Q6IE36 1432 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 GCP02774 474 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
PDZD11-202ENST00000374454 SLIT3O75094 1523 aa13.57□□□□□ -0.24
PDZD11-202ENST00000374454 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
PDZD11-202ENST00000374454 NUTM2BA6NNL0 878 aaPredicted RBP13.56□□□□□ -0.24
PDZD11-202ENST00000374454 NUTM2EB1AL46 878 aaPredicted RBP13.56□□□□□ -0.24
PDZD11-202ENST00000374454 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
PDZD11-202ENST00000374454 NUTM2AQ8IVF1 878 aaPredicted RBP13.56□□□□□ -0.24
PDZD11-202ENST00000374454 CPDO75976 1380 aa13.55□□□□□ -0.24
PDZD11-202ENST00000374454 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
PDZD11-202ENST00000374454 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
PDZD11-202ENST00000374454 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
PDZD11-202ENST00000374454 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
PDZD11-202ENST00000374454 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
PDZD11-202ENST00000374454 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
PDZD11-202ENST00000374454 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
PDZD11-202ENST00000374454 LRP6O75581 1613 aa13.53□□□□□ -0.24
PDZD11-202ENST00000374454 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
PDZD11-202ENST00000374454 FAM83GA6ND36 823 aa13.52□□□□□ -0.25
PDZD11-202ENST00000374454 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
PDZD11-202ENST00000374454 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
PDZD11-202ENST00000374454 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
PDZD11-202ENST00000374454 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
PDZD11-202ENST00000374454 NFAT5O94916 1531 aa13.51□□□□□ -0.25
PDZD11-202ENST00000374454 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
PDZD11-202ENST00000374454 FNBP4Q8N3X1 1017 aaPredicted RBP13.51□□□□□ -0.25
PDZD11-202ENST00000374454 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
PDZD11-202ENST00000374454 SOX12O15370 315 aa13.5□□□□□ -0.25
PDZD11-202ENST00000374454 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
PDZD11-202ENST00000374454 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 FBLN1P23142 703 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 RALBP1Q15311 655 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 NGLY1Q96IV0 654 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
PDZD11-202ENST00000374454 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
PDZD11-202ENST00000374454 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
PDZD11-202ENST00000374454 IP6K1Q92551 441 aa13.48□□□□□ -0.25
PDZD11-202ENST00000374454 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
PDZD11-202ENST00000374454 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
PDZD11-202ENST00000374454 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
PDZD11-202ENST00000374454 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 SLIT2O94813 1529 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 ABCC6O95255 1503 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 AMPHP49418 695 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
PDZD11-202ENST00000374454 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
PDZD11-202ENST00000374454 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
PDZD11-202ENST00000374454 HOXC9P31274 260 aa13.45□□□□□ -0.26
PDZD11-202ENST00000374454 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
PDZD11-202ENST00000374454 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
PDZD11-202ENST00000374454 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
PDZD11-202ENST00000374454 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
PDZD11-202ENST00000374454 AFF2P51816 1311 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms