RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
COL9A2-202ENST00000372748 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
COL9A2-202ENST00000372748 GLI2P10070 1586 aa18.68■□□□□ 0.58
COL9A2-202ENST00000372748 U2SURPO15042 1029 aaKnown RBP18.67■□□□□ 0.58
COL9A2-202ENST00000372748 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 HSCBQ8IWL3 235 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 IQSEC2Q5JU85 1478 aa18.67■□□□□ 0.58
COL9A2-202ENST00000372748 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
COL9A2-202ENST00000372748 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
COL9A2-202ENST00000372748 CLCN1P35523 988 aa18.66■□□□□ 0.58
COL9A2-202ENST00000372748 TRIM27P14373 513 aa18.65■□□□□ 0.58
COL9A2-202ENST00000372748 MRE11P49959 708 aa18.65■□□□□ 0.58
COL9A2-202ENST00000372748 CAMSAP1Q5T5Y3 1602 aa18.65■□□□□ 0.58
COL9A2-202ENST00000372748 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
COL9A2-202ENST00000372748 GRPEL1Q9HAV7 217 aa18.64■□□□□ 0.57
COL9A2-202ENST00000372748 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
COL9A2-202ENST00000372748 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
COL9A2-202ENST00000372748 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
COL9A2-202ENST00000372748 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
COL9A2-202ENST00000372748 A0A1W2PP64 1363 aa18.62■□□□□ 0.57
COL9A2-202ENST00000372748 ARHGEF28Q8N1W1 1705 aaKnown RBP18.62■□□□□ 0.57
COL9A2-202ENST00000372748 SSH1Q8WYL5 1049 aa18.62■□□□□ 0.57
COL9A2-202ENST00000372748 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
COL9A2-202ENST00000372748 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
COL9A2-202ENST00000372748 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
COL9A2-202ENST00000372748 FBXO31Q5XUX0 539 aaPredicted RBP18.6■□□□□ 0.57
COL9A2-202ENST00000372748 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
COL9A2-202ENST00000372748 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
COL9A2-202ENST00000372748 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
COL9A2-202ENST00000372748 NOB1Q9ULX3 412 aaKnown RBP18.6■□□□□ 0.57
COL9A2-202ENST00000372748 YEATS2Q9ULM3 1422 aa18.59■□□□□ 0.57
COL9A2-202ENST00000372748 TMEM57Q8N5G2 664 aa18.59■□□□□ 0.57
COL9A2-202ENST00000372748 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
COL9A2-202ENST00000372748 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
COL9A2-202ENST00000372748 USP32Q8NFA0 1604 aa18.58■□□□□ 0.57
COL9A2-202ENST00000372748 ATF7IPQ6VMQ6 1270 aa18.58■□□□□ 0.57
COL9A2-202ENST00000372748 PUS7Q96PZ0 661 aaKnown RBP18.58■□□□□ 0.57
COL9A2-202ENST00000372748 FYB1O15117 783 aa18.58■□□□□ 0.56
COL9A2-202ENST00000372748 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.56
COL9A2-202ENST00000372748 DIP2CQ9Y2E4 1556 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 NSD2O96028 1365 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 PIK3C2BO00750 1634 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 ESPNB1AK53 854 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 FBLN1P23142 703 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 SMC5Q8IY18 1101 aa18.57■□□□□ 0.56
COL9A2-202ENST00000372748 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
COL9A2-202ENST00000372748 HSP90AA1P07900 732 aaKnown RBP18.56■□□□□ 0.56
COL9A2-202ENST00000372748 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
COL9A2-202ENST00000372748 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
COL9A2-202ENST00000372748 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
COL9A2-202ENST00000372748 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
COL9A2-202ENST00000372748 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
COL9A2-202ENST00000372748 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
COL9A2-202ENST00000372748 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
COL9A2-202ENST00000372748 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
COL9A2-202ENST00000372748 DDIT3P35638 169 aa18.55■□□□□ 0.56
COL9A2-202ENST00000372748 HSP90AA2PQ14568 343 aaPredicted RBP18.55■□□□□ 0.56
COL9A2-202ENST00000372748 NEO1Q92859 1461 aa18.54■□□□□ 0.56
COL9A2-202ENST00000372748 TRIM44Q96DX7 344 aaPredicted RBP18.54■□□□□ 0.56
COL9A2-202ENST00000372748 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
COL9A2-202ENST00000372748 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
COL9A2-202ENST00000372748 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
COL9A2-202ENST00000372748 CD2BP2O95400 341 aaKnown RBP18.53■□□□□ 0.56
COL9A2-202ENST00000372748 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
COL9A2-202ENST00000372748 CABP1Q9NZU7 370 aa18.53■□□□□ 0.56
COL9A2-202ENST00000372748 RIPK4P57078 832 aa18.52■□□□□ 0.56
COL9A2-202ENST00000372748 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
COL9A2-202ENST00000372748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL9A2-202ENST00000372748 NUCB1Q02818 461 aa18.51■□□□□ 0.55
COL9A2-202ENST00000372748 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
COL9A2-202ENST00000372748 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
COL9A2-202ENST00000372748 VSIG10Q8N0Z9 540 aa18.51■□□□□ 0.55
COL9A2-202ENST00000372748 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
COL9A2-202ENST00000372748 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
COL9A2-202ENST00000372748 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
COL9A2-202ENST00000372748 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
COL9A2-202ENST00000372748 PTPRMP28827 1452 aa18.5■□□□□ 0.55
COL9A2-202ENST00000372748 YTHDC2Q9H6S0 1430 aaKnown RBP18.5■□□□□ 0.55
COL9A2-202ENST00000372748 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
COL9A2-202ENST00000372748 CHD1LQ86WJ1 897 aa18.5■□□□□ 0.55
COL9A2-202ENST00000372748 SNX21Q969T3 373 aa18.5■□□□□ 0.55
COL9A2-202ENST00000372748 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
COL9A2-202ENST00000372748 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
COL9A2-202ENST00000372748 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
COL9A2-202ENST00000372748 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
COL9A2-202ENST00000372748 KIF2CQ99661 725 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 ADGRB2O60241 1585 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
COL9A2-202ENST00000372748 MLECQ14165 292 aa18.47■□□□□ 0.55
COL9A2-202ENST00000372748 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
COL9A2-202ENST00000372748 RICTORQ6R327 1708 aa18.46■□□□□ 0.55
COL9A2-202ENST00000372748 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
COL9A2-202ENST00000372748 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
COL9A2-202ENST00000372748 RRP9O43818 475 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms