RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 CDC42BPGQ6DT37 1551 aa26.62■■□□□ 1.85
VEGFA-204ENST00000372064 TNRQ92752 1358 aa26.62■■□□□ 1.85
VEGFA-204ENST00000372064 CANXP27824 592 aaKnown RBP26.61■■□□□ 1.85
VEGFA-204ENST00000372064 ZBTB47Q9UFB7 747 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-204ENST00000372064 WASLO00401 505 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-204ENST00000372064 PANK1Q8TE04 598 aa26.59■■□□□ 1.85
VEGFA-204ENST00000372064 FRAT1Q92837 279 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-204ENST00000372064 DIAPH1O60610 1272 aaKnown RBP26.58■■□□□ 1.85
VEGFA-204ENST00000372064 TECPR2O15040 1411 aa26.58■■□□□ 1.85
VEGFA-204ENST00000372064 FBLN1P23142 703 aa26.58■■□□□ 1.85
VEGFA-204ENST00000372064 TMPOP42166 694 aaKnown RBP26.57■■□□□ 1.84
VEGFA-204ENST00000372064 CPSF1Q10570 1443 aaKnown RBP26.57■■□□□ 1.84
VEGFA-204ENST00000372064 HDGFP51858 240 aaKnown RBP26.57■■□□□ 1.84
VEGFA-204ENST00000372064 CLUAP1Q96AJ1 413 aa26.57■■□□□ 1.84
VEGFA-204ENST00000372064 COG6Q9Y2V7 657 aa26.57■■□□□ 1.84
VEGFA-204ENST00000372064 FAM135BQ49AJ0 1406 aa26.57■■□□□ 1.84
VEGFA-204ENST00000372064 AAMPQ13685 434 aa26.56■■□□□ 1.84
VEGFA-204ENST00000372064 NPM2Q86SE8 214 aaKnown RBP26.56■■□□□ 1.84
VEGFA-204ENST00000372064 MAPK8IP3Q9UPT6 1336 aa26.56■■□□□ 1.84
VEGFA-204ENST00000372064 CT47B1P0C2W7 299 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-204ENST00000372064 BCL2L13Q9BXK5 485 aa26.55■■□□□ 1.84
VEGFA-204ENST00000372064 SIRT1Q96EB6 747 aa26.55■■□□□ 1.84
VEGFA-204ENST00000372064 TRIM35Q9UPQ4 493 aa26.55■■□□□ 1.84
VEGFA-204ENST00000372064 CPS1P31327 1500 aa26.55■■□□□ 1.84
VEGFA-204ENST00000372064 PPIP5K1Q6PFW1 1433 aa26.54■■□□□ 1.84
VEGFA-204ENST00000372064 TMEM2Q9UHN6 1383 aa26.54■■□□□ 1.84
VEGFA-204ENST00000372064 IGHDP01880 384 aa26.53■■□□□ 1.84
VEGFA-204ENST00000372064 IL16Q14005 1332 aa26.53■■□□□ 1.84
VEGFA-204ENST00000372064 UBR1Q8IWV7 1749 aa26.53■■□□□ 1.84
VEGFA-204ENST00000372064 POLKQ9UBT6 870 aa26.53■■□□□ 1.84
VEGFA-204ENST00000372064 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
VEGFA-204ENST00000372064 PPM1GO15355 546 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-204ENST00000372064 NCKAP5LQ9HCH0 1330 aa26.52■■□□□ 1.84
VEGFA-204ENST00000372064 PNNQ9H307 717 aaKnown RBP26.52■■□□□ 1.84
VEGFA-204ENST00000372064 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
VEGFA-204ENST00000372064 TNNQ9UQP3 1299 aa26.52■■□□□ 1.84
VEGFA-204ENST00000372064 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
VEGFA-204ENST00000372064 NUDT16Q96DE0 195 aaKnown RBP26.51■■□□□ 1.83
VEGFA-204ENST00000372064 C8orf34Q49A92 452 aa26.5■■□□□ 1.83
VEGFA-204ENST00000372064 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
VEGFA-204ENST00000372064 MON2Q7Z3U7 1717 aa26.49■■□□□ 1.83
VEGFA-204ENST00000372064 RLBP1P12271 317 aa26.49■■□□□ 1.83
VEGFA-204ENST00000372064 NME9Q86XW9 330 aa26.49■■□□□ 1.83
VEGFA-204ENST00000372064 RIPK4P57078 832 aa26.48■■□□□ 1.83
VEGFA-204ENST00000372064 FCHSD2O94868 740 aa26.47■■□□□ 1.83
VEGFA-204ENST00000372064 ZRANB1Q9UGI0 708 aa26.47■■□□□ 1.83
VEGFA-204ENST00000372064 CCDC61Q9Y6R9 512 aa26.47■■□□□ 1.83
VEGFA-204ENST00000372064 RGS3P49796 1198 aa26.46■■□□□ 1.83
VEGFA-204ENST00000372064 MAP2P11137 1827 aaKnown RBP26.46■■□□□ 1.83
VEGFA-204ENST00000372064 ADAMTS13Q76LX8 1427 aa26.45■■□□□ 1.82
VEGFA-204ENST00000372064 CEBPAP49715 358 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-204ENST00000372064 EXOSC9Q06265 439 aaKnown RBP26.45■■□□□ 1.82
VEGFA-204ENST00000372064 ROBO2Q9HCK4 1378 aa26.45■■□□□ 1.82
VEGFA-204ENST00000372064 EMILIN1Q9Y6C2 1016 aa26.45■■□□□ 1.82
VEGFA-204ENST00000372064 AKAP12Q02952 1782 aa26.45■■□□□ 1.82
VEGFA-204ENST00000372064 LTKP29376 864 aa26.44■■□□□ 1.82
VEGFA-204ENST00000372064 AATKQ6ZMQ8 1374 aa26.43■■□□□ 1.82
VEGFA-204ENST00000372064 RSPH6AQ9H0K4 717 aa26.43■■□□□ 1.82
VEGFA-204ENST00000372064 CDK12Q9NYV4 1490 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-204ENST00000372064 PRR36Q9H6K5 1346 aa26.43■■□□□ 1.82
VEGFA-204ENST00000372064 PRKAR2BP31323 418 aa26.42■■□□□ 1.82
VEGFA-204ENST00000372064 PMFBP1Q8TBY8 1022 aa26.42■■□□□ 1.82
VEGFA-204ENST00000372064 C3P01024 1663 aa26.42■■□□□ 1.82
VEGFA-204ENST00000372064 ZKSCAN2Q63HK3 967 aa26.42■■□□□ 1.82
VEGFA-204ENST00000372064 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
VEGFA-204ENST00000372064 DDRGK1Q96HY6 314 aa26.41■■□□□ 1.82
VEGFA-204ENST00000372064 ITSN1Q15811 1721 aa26.4■■□□□ 1.82
VEGFA-204ENST00000372064 PCDHB15Q9Y5E8 787 aa26.4■■□□□ 1.82
VEGFA-204ENST00000372064 MVPQ14764 893 aaKnown RBP26.39■■□□□ 1.82
VEGFA-204ENST00000372064 HMOX1P09601 288 aa26.39■■□□□ 1.82
VEGFA-204ENST00000372064 COG3Q96JB2 828 aa26.38■■□□□ 1.81
VEGFA-204ENST00000372064 PLEKHG1Q9ULL1 1385 aa26.38■■□□□ 1.81
VEGFA-204ENST00000372064 SMC4Q9NTJ3 1288 aa26.37■■□□□ 1.81
VEGFA-204ENST00000372064 IL13P35225 146 aa26.36■■□□□ 1.81
VEGFA-204ENST00000372064 DZIP1LQ8IYY4 767 aaKnown RBP26.36■■□□□ 1.81
VEGFA-204ENST00000372064 SSH1Q8WYL5 1049 aa26.36■■□□□ 1.81
VEGFA-204ENST00000372064 PHACTR3Q96KR7 559 aa26.36■■□□□ 1.81
VEGFA-204ENST00000372064 NEFMP07197 916 aa26.35■■□□□ 1.81
VEGFA-204ENST00000372064 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
VEGFA-204ENST00000372064 PLPPR3Q6T4P5 718 aa26.35■■□□□ 1.81
VEGFA-204ENST00000372064 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
VEGFA-204ENST00000372064 ZNF692Q9BU19 519 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-204ENST00000372064 TOPAZ1Q8N9V7 1692 aa26.35■■□□□ 1.81
VEGFA-204ENST00000372064 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-204ENST00000372064 NRKQ7Z2Y5 1582 aa26.33■■□□□ 1.81
VEGFA-204ENST00000372064 NUTM2FA1L443 756 aa26.33■■□□□ 1.81
VEGFA-204ENST00000372064 FTSJ3Q8IY81 847 aaKnown RBP26.32■■□□□ 1.8
VEGFA-204ENST00000372064 TRIM27P14373 513 aa26.32■■□□□ 1.8
VEGFA-204ENST00000372064 NFE2L2Q16236 605 aa26.32■■□□□ 1.8
VEGFA-204ENST00000372064 NBR1Q14596 966 aa26.32■■□□□ 1.8
VEGFA-204ENST00000372064 RWDD1Q9H446 243 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-204ENST00000372064 PTPRUQ92729 1446 aa26.3■■□□□ 1.8
VEGFA-204ENST00000372064 ATF7IPQ6VMQ6 1270 aa26.3■■□□□ 1.8
VEGFA-204ENST00000372064 EID1Q9Y6B2 187 aa26.3■■□□□ 1.8
VEGFA-204ENST00000372064 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
VEGFA-204ENST00000372064 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
VEGFA-204ENST00000372064 ACEP12821 1306 aa26.28■■□□□ 1.8
VEGFA-204ENST00000372064 LAS1LQ9Y4W2 734 aaKnown RBP26.28■■□□□ 1.8
VEGFA-204ENST00000372064 KIF16BQ96L93 1317 aa26.27■■□□□ 1.8
VEGFA-204ENST00000372064 NOB1Q9ULX3 412 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms