RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
TCTN3-202ENST00000371209 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
TCTN3-202ENST00000371209 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
TCTN3-202ENST00000371209 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
TCTN3-202ENST00000371209 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
TCTN3-202ENST00000371209 PHF8Q9UPP1 1060 aa14.44□□□□□ -0.1
TCTN3-202ENST00000371209 POLR3AO14802 1390 aaPredicted RBP14.44□□□□□ -0.1
TCTN3-202ENST00000371209 AKAP12Q02952 1782 aa14.44□□□□□ -0.1
TCTN3-202ENST00000371209 ACEP12821 1306 aa14.44□□□□□ -0.1
TCTN3-202ENST00000371209 CARD14Q9BXL6 1004 aa14.44□□□□□ -0.1
TCTN3-202ENST00000371209 KIF1AQ12756 1690 aa14.43□□□□□ -0.1
TCTN3-202ENST00000371209 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
TCTN3-202ENST00000371209 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
TCTN3-202ENST00000371209 PER1O15534 1290 aaPredicted RBP14.42□□□□□ -0.1
TCTN3-202ENST00000371209 BRINP3Q76B58 766 aa14.42□□□□□ -0.1
TCTN3-202ENST00000371209 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
TCTN3-202ENST00000371209 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
TCTN3-202ENST00000371209 NRKQ7Z2Y5 1582 aa14.41□□□□□ -0.1
TCTN3-202ENST00000371209 KTN1Q86UP2 1357 aaKnown RBP14.4□□□□□ -0.1
TCTN3-202ENST00000371209 USP6P35125 1406 aa14.4□□□□□ -0.1
TCTN3-202ENST00000371209 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
TCTN3-202ENST00000371209 FOXO3O43524 673 aa14.39□□□□□ -0.11
TCTN3-202ENST00000371209 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
TCTN3-202ENST00000371209 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
TCTN3-202ENST00000371209 UBAP1LF5GYI3 381 aa14.38□□□□□ -0.11
TCTN3-202ENST00000371209 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
TCTN3-202ENST00000371209 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
TCTN3-202ENST00000371209 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
TCTN3-202ENST00000371209 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
TCTN3-202ENST00000371209 TOM1O60784 492 aa14.38□□□□□ -0.11
TCTN3-202ENST00000371209 XPCQ01831 940 aaPredicted RBP14.37□□□□□ -0.11
TCTN3-202ENST00000371209 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
TCTN3-202ENST00000371209 TRPM3Q9HCF6 1732 aaPredicted RBP14.36□□□□□ -0.11
TCTN3-202ENST00000371209 PXDNQ92626 1479 aa14.36□□□□□ -0.11
TCTN3-202ENST00000371209 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
TCTN3-202ENST00000371209 DIEXFQ68CQ4 756 aaKnown RBP14.36□□□□□ -0.11
TCTN3-202ENST00000371209 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
TCTN3-202ENST00000371209 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
TCTN3-202ENST00000371209 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
TCTN3-202ENST00000371209 PSME1Q06323 249 aa14.35□□□□□ -0.11
TCTN3-202ENST00000371209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
TCTN3-202ENST00000371209 NPHP3Q7Z494 1330 aa14.35□□□□□ -0.11
TCTN3-202ENST00000371209 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
TCTN3-202ENST00000371209 CGNL1Q0VF96 1302 aa14.33□□□□□ -0.12
TCTN3-202ENST00000371209 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.12
TCTN3-202ENST00000371209 PIK3C2AO00443 1686 aa14.33□□□□□ -0.12
TCTN3-202ENST00000371209 KIF20BQ96Q89 1820 aa14.33□□□□□ -0.12
TCTN3-202ENST00000371209 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
TCTN3-202ENST00000371209 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
TCTN3-202ENST00000371209 FYB1O15117 783 aa14.32□□□□□ -0.12
TCTN3-202ENST00000371209 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
TCTN3-202ENST00000371209 NME9Q86XW9 330 aa14.32□□□□□ -0.12
TCTN3-202ENST00000371209 NPC1L1Q9UHC9 1359 aa14.32□□□□□ -0.12
TCTN3-202ENST00000371209 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
TCTN3-202ENST00000371209 CC2D1BQ5T0F9 858 aaKnown RBP14.31□□□□□ -0.12
TCTN3-202ENST00000371209 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
TCTN3-202ENST00000371209 ALS2Q96Q42 1657 aa14.31□□□□□ -0.12
TCTN3-202ENST00000371209 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
TCTN3-202ENST00000371209 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
TCTN3-202ENST00000371209 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
TCTN3-202ENST00000371209 NSD2O96028 1365 aa14.3□□□□□ -0.12
TCTN3-202ENST00000371209 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
TCTN3-202ENST00000371209 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
TCTN3-202ENST00000371209 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
TCTN3-202ENST00000371209 OVOS2A0A0J9YW53 1432 aa14.29□□□□□ -0.12
TCTN3-202ENST00000371209 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
TCTN3-202ENST00000371209 OVOS2Q6IE36 1432 aa14.29□□□□□ -0.12
TCTN3-202ENST00000371209 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 COL16A1Q07092 1604 aaPredicted RBP14.28□□□□□ -0.12
TCTN3-202ENST00000371209 SPATA31A3Q5VYP0 1347 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 MYT1Q01538 1121 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 NUTM2GQ5VZR2 741 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 USP31Q70CQ4 1352 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 PARD3Q8TEW0 1356 aa14.28□□□□□ -0.12
TCTN3-202ENST00000371209 ABTB2Q8N961 1025 aa14.27□□□□□ -0.12
TCTN3-202ENST00000371209 PRKRIP1Q9H875 184 aaPredicted RBP14.27□□□□□ -0.12
TCTN3-202ENST00000371209 NLRP6P59044 892 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 MED1Q15648 1581 aaPredicted RBP14.25□□□□□ -0.13
TCTN3-202ENST00000371209 ANP32CO43423 234 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 COG3Q96JB2 828 aa14.25□□□□□ -0.13
TCTN3-202ENST00000371209 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
TCTN3-202ENST00000371209 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
TCTN3-202ENST00000371209 SLIT3O75094 1523 aa14.23□□□□□ -0.13
TCTN3-202ENST00000371209 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
TCTN3-202ENST00000371209 RALBP1Q15311 655 aa14.23□□□□□ -0.13
TCTN3-202ENST00000371209 MIER1Q8N108 512 aa14.23□□□□□ -0.13
TCTN3-202ENST00000371209 USP19O94966 1318 aa14.22□□□□□ -0.13
TCTN3-202ENST00000371209 FBLN1P23142 703 aa14.22□□□□□ -0.13
TCTN3-202ENST00000371209 NLRP13Q86W25 1043 aa14.22□□□□□ -0.13
TCTN3-202ENST00000371209 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
TCTN3-202ENST00000371209 PHRF1Q9P1Y6 1649 aaKnown RBP14.22□□□□□ -0.13
TCTN3-202ENST00000371209 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.13
TCTN3-202ENST00000371209 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms