RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
LAMA4-204ENST00000368640 KCNA4P22459 653 aa16.16■□□□□ 0.18
LAMA4-204ENST00000368640 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
LAMA4-204ENST00000368640 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
LAMA4-204ENST00000368640 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
LAMA4-204ENST00000368640 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
LAMA4-204ENST00000368640 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
LAMA4-204ENST00000368640 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
LAMA4-204ENST00000368640 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
LAMA4-204ENST00000368640 PSME1Q06323 249 aa16.14■□□□□ 0.17
LAMA4-204ENST00000368640 AFF2P51816 1311 aa16.14■□□□□ 0.17
LAMA4-204ENST00000368640 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
LAMA4-204ENST00000368640 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
LAMA4-204ENST00000368640 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
LAMA4-204ENST00000368640 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
LAMA4-204ENST00000368640 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
LAMA4-204ENST00000368640 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
LAMA4-204ENST00000368640 QTRT2Q9H974 415 aaKnown RBP16.11■□□□□ 0.17
LAMA4-204ENST00000368640 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
LAMA4-204ENST00000368640 RBM6P78332 1123 aaKnown RBP16.1■□□□□ 0.17
LAMA4-204ENST00000368640 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
LAMA4-204ENST00000368640 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
LAMA4-204ENST00000368640 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
LAMA4-204ENST00000368640 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
LAMA4-204ENST00000368640 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
LAMA4-204ENST00000368640 ACEP12821 1306 aa16.09■□□□□ 0.17
LAMA4-204ENST00000368640 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-204ENST00000368640 AHDC1Q5TGY3 1603 aaPredicted RBP16.08■□□□□ 0.17
LAMA4-204ENST00000368640 MYOM1P52179 1685 aa16.08■□□□□ 0.17
LAMA4-204ENST00000368640 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
LAMA4-204ENST00000368640 C8orf37Q96NL8 207 aa16.08■□□□□ 0.16
LAMA4-204ENST00000368640 ORAI2Q96SN7 254 aa16.08■□□□□ 0.16
LAMA4-204ENST00000368640 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
LAMA4-204ENST00000368640 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
LAMA4-204ENST00000368640 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
LAMA4-204ENST00000368640 RGS12O14924 1447 aa16.06■□□□□ 0.16
LAMA4-204ENST00000368640 EDC4Q6P2E9 1401 aaKnown RBP16.06■□□□□ 0.16
LAMA4-204ENST00000368640 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
LAMA4-204ENST00000368640 FOXO3O43524 673 aa16.06■□□□□ 0.16
LAMA4-204ENST00000368640 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 USP6P35125 1406 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 CPSF1Q10570 1443 aaKnown RBP16.05■□□□□ 0.16
LAMA4-204ENST00000368640 A0A1W2PP64 1363 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
LAMA4-204ENST00000368640 PANK3Q9H999 370 aa16.05■□□□□ 0.16
LAMA4-204ENST00000368640 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
LAMA4-204ENST00000368640 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
LAMA4-204ENST00000368640 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
LAMA4-204ENST00000368640 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
LAMA4-204ENST00000368640 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
LAMA4-204ENST00000368640 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
LAMA4-204ENST00000368640 NSD2O96028 1365 aa16.02■□□□□ 0.16
LAMA4-204ENST00000368640 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
LAMA4-204ENST00000368640 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
LAMA4-204ENST00000368640 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
LAMA4-204ENST00000368640 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 NLRP13Q86W25 1043 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
LAMA4-204ENST00000368640 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
LAMA4-204ENST00000368640 COG3Q96JB2 828 aa15.98■□□□□ 0.15
LAMA4-204ENST00000368640 PXDNQ92626 1479 aa15.97■□□□□ 0.15
LAMA4-204ENST00000368640 NRKQ7Z2Y5 1582 aa15.97■□□□□ 0.15
LAMA4-204ENST00000368640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
LAMA4-204ENST00000368640 DDX17Q92841 729 aaKnown RBP15.97■□□□□ 0.15
LAMA4-204ENST00000368640 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
LAMA4-204ENST00000368640 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.15
LAMA4-204ENST00000368640 PNPLA6Q8IY17 1366 aa15.96■□□□□ 0.15
LAMA4-204ENST00000368640 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
LAMA4-204ENST00000368640 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
LAMA4-204ENST00000368640 NLRP6P59044 892 aa15.95■□□□□ 0.14
LAMA4-204ENST00000368640 XPCQ01831 940 aaPredicted RBP15.95■□□□□ 0.14
LAMA4-204ENST00000368640 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
LAMA4-204ENST00000368640 USP21Q9UK80 565 aa15.95■□□□□ 0.14
LAMA4-204ENST00000368640 TRPC5Q9UL62 973 aaPredicted RBP15.95■□□□□ 0.14
LAMA4-204ENST00000368640 ANP32CO43423 234 aa15.94■□□□□ 0.14
LAMA4-204ENST00000368640 CCDC125Q86Z20 511 aa15.94■□□□□ 0.14
LAMA4-204ENST00000368640 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
LAMA4-204ENST00000368640 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
LAMA4-204ENST00000368640 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
LAMA4-204ENST00000368640 ALS2Q96Q42 1657 aa15.92■□□□□ 0.14
LAMA4-204ENST00000368640 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
LAMA4-204ENST00000368640 PER1O15534 1290 aaPredicted RBP15.92■□□□□ 0.14
LAMA4-204ENST00000368640 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
LAMA4-204ENST00000368640 RALBP1Q15311 655 aa15.91■□□□□ 0.14
LAMA4-204ENST00000368640 USP54Q70EL1 1684 aa15.9■□□□□ 0.14
LAMA4-204ENST00000368640 FYB1O15117 783 aa15.9■□□□□ 0.14
LAMA4-204ENST00000368640 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
LAMA4-204ENST00000368640 EP400Q96L91 3159 aa15.89■□□□□ 0.13
LAMA4-204ENST00000368640 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
LAMA4-204ENST00000368640 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
LAMA4-204ENST00000368640 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
LAMA4-204ENST00000368640 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
LAMA4-204ENST00000368640 NME9Q86XW9 330 aa15.89■□□□□ 0.13
LAMA4-204ENST00000368640 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
LAMA4-204ENST00000368640 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms