RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ALS2Q96Q42 1657 aa17.55■□□□□ 0.4
EFNA1-201ENST00000368406 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
EFNA1-201ENST00000368406 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
EFNA1-201ENST00000368406 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
EFNA1-201ENST00000368406 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
EFNA1-201ENST00000368406 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
EFNA1-201ENST00000368406 MYOM1P52179 1685 aa17.52■□□□□ 0.39
EFNA1-201ENST00000368406 USP6P35125 1406 aa17.52■□□□□ 0.39
EFNA1-201ENST00000368406 CPSF1Q10570 1443 aaKnown RBP17.52■□□□□ 0.39
EFNA1-201ENST00000368406 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
EFNA1-201ENST00000368406 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
EFNA1-201ENST00000368406 NINLQ9Y2I6 1382 aa17.51■□□□□ 0.39
EFNA1-201ENST00000368406 AFF2P51816 1311 aa17.5■□□□□ 0.39
EFNA1-201ENST00000368406 ILDR2Q71H61 639 aa17.5■□□□□ 0.39
EFNA1-201ENST00000368406 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
EFNA1-201ENST00000368406 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
EFNA1-201ENST00000368406 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
EFNA1-201ENST00000368406 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
EFNA1-201ENST00000368406 C11orf95C9JLR9 678 aaPredicted RBP17.49■□□□□ 0.39
EFNA1-201ENST00000368406 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
EFNA1-201ENST00000368406 POTEAQ6S8J7 498 aa17.49■□□□□ 0.39
EFNA1-201ENST00000368406 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
EFNA1-201ENST00000368406 MARF1Q9Y4F3 1742 aaKnown RBP17.49■□□□□ 0.39
EFNA1-201ENST00000368406 SLC12A5Q9H2X9 1139 aa17.48■□□□□ 0.39
EFNA1-201ENST00000368406 AKAP12Q02952 1782 aa17.48■□□□□ 0.39
EFNA1-201ENST00000368406 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
EFNA1-201ENST00000368406 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
EFNA1-201ENST00000368406 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
EFNA1-201ENST00000368406 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
EFNA1-201ENST00000368406 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
EFNA1-201ENST00000368406 KTN1Q86UP2 1357 aaKnown RBP17.46■□□□□ 0.39
EFNA1-201ENST00000368406 CD163L1Q9NR16 1453 aa17.46■□□□□ 0.39
EFNA1-201ENST00000368406 TTC21BQ7Z4L5 1316 aa17.45■□□□□ 0.38
EFNA1-201ENST00000368406 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
EFNA1-201ENST00000368406 USP21Q9UK80 565 aa17.45■□□□□ 0.38
EFNA1-201ENST00000368406 CRYBG1Q9Y4K1 1723 aa17.45■□□□□ 0.38
EFNA1-201ENST00000368406 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
EFNA1-201ENST00000368406 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
EFNA1-201ENST00000368406 USP19O94966 1318 aa17.43■□□□□ 0.38
EFNA1-201ENST00000368406 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
EFNA1-201ENST00000368406 SLIT2O94813 1529 aa17.43■□□□□ 0.38
EFNA1-201ENST00000368406 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
EFNA1-201ENST00000368406 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
EFNA1-201ENST00000368406 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
EFNA1-201ENST00000368406 A0A1W2PP64 1363 aa17.42■□□□□ 0.38
EFNA1-201ENST00000368406 ANKRD36BQ8N2N9 1353 aa17.42■□□□□ 0.38
EFNA1-201ENST00000368406 NLRP6P59044 892 aa17.42■□□□□ 0.38
EFNA1-201ENST00000368406 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
EFNA1-201ENST00000368406 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
EFNA1-201ENST00000368406 RXRBP28702 533 aa17.41■□□□□ 0.38
EFNA1-201ENST00000368406 TRPC5Q9UL62 973 aaPredicted RBP17.41■□□□□ 0.38
EFNA1-201ENST00000368406 GCP02774 474 aa17.4■□□□□ 0.38
EFNA1-201ENST00000368406 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
EFNA1-201ENST00000368406 PHRF1Q9P1Y6 1649 aaKnown RBP17.4■□□□□ 0.38
EFNA1-201ENST00000368406 PIK3C2AO00443 1686 aa17.39■□□□□ 0.38
EFNA1-201ENST00000368406 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.38
EFNA1-201ENST00000368406 ATRNO75882 1429 aa17.39■□□□□ 0.37
EFNA1-201ENST00000368406 NWD2Q9ULI1 1742 aa17.39■□□□□ 0.37
EFNA1-201ENST00000368406 PANK3Q9H999 370 aa17.38■□□□□ 0.37
EFNA1-201ENST00000368406 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
EFNA1-201ENST00000368406 CPDO75976 1380 aa17.38■□□□□ 0.37
EFNA1-201ENST00000368406 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
EFNA1-201ENST00000368406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
EFNA1-201ENST00000368406 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
EFNA1-201ENST00000368406 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
EFNA1-201ENST00000368406 COL14A1Q05707 1796 aaKnown RBP17.37■□□□□ 0.37
EFNA1-201ENST00000368406 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
EFNA1-201ENST00000368406 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
EFNA1-201ENST00000368406 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
EFNA1-201ENST00000368406 SLIT3O75094 1523 aa17.36■□□□□ 0.37
EFNA1-201ENST00000368406 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
EFNA1-201ENST00000368406 DDX10Q13206 875 aaKnown RBP17.36■□□□□ 0.37
EFNA1-201ENST00000368406 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
EFNA1-201ENST00000368406 PLCH1Q4KWH8 1693 aa17.35■□□□□ 0.37
EFNA1-201ENST00000368406 NME9Q86XW9 330 aa17.35■□□□□ 0.37
EFNA1-201ENST00000368406 BTG4Q9NY30 223 aa17.35■□□□□ 0.37
EFNA1-201ENST00000368406 SOCS7O14512 581 aa17.34■□□□□ 0.37
EFNA1-201ENST00000368406 VPS72Q15906 364 aa17.34■□□□□ 0.37
EFNA1-201ENST00000368406 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
EFNA1-201ENST00000368406 USP54Q70EL1 1684 aa17.33■□□□□ 0.37
EFNA1-201ENST00000368406 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.36
EFNA1-201ENST00000368406 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
EFNA1-201ENST00000368406 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
EFNA1-201ENST00000368406 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
EFNA1-201ENST00000368406 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
EFNA1-201ENST00000368406 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
EFNA1-201ENST00000368406 NRAPQ86VF7 1730 aa17.3■□□□□ 0.36
EFNA1-201ENST00000368406 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
EFNA1-201ENST00000368406 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
EFNA1-201ENST00000368406 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
EFNA1-201ENST00000368406 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
EFNA1-201ENST00000368406 NFAT5O94916 1531 aa17.29■□□□□ 0.36
EFNA1-201ENST00000368406 FYB1O15117 783 aa17.29■□□□□ 0.36
EFNA1-201ENST00000368406 ANKRD26Q9UPS8 1709 aa17.28■□□□□ 0.36
EFNA1-201ENST00000368406 LMO7Q8WWI1 1683 aa17.28■□□□□ 0.36
EFNA1-201ENST00000368406 CAMTA1Q9Y6Y1 1673 aa17.28■□□□□ 0.36
EFNA1-201ENST00000368406 ONECUT3O60422 494 aaPredicted RBP17.28■□□□□ 0.36
EFNA1-201ENST00000368406 COG3Q96JB2 828 aa17.28■□□□□ 0.36
EFNA1-201ENST00000368406 EVA1CP58658 441 aa17.27■□□□□ 0.35
EFNA1-201ENST00000368406 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms