RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
NUP43-202ENST00000367402 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
NUP43-202ENST00000367402 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
NUP43-202ENST00000367402 TESK2Q96S53 571 aa13.85□□□□□ -0.19
NUP43-202ENST00000367402 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
NUP43-202ENST00000367402 SOS2Q07890 1332 aaPredicted RBP13.85□□□□□ -0.19
NUP43-202ENST00000367402 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
NUP43-202ENST00000367402 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
NUP43-202ENST00000367402 JCADQ9P266 1359 aa13.83□□□□□ -0.19
NUP43-202ENST00000367402 ATP7BP35670 1465 aa13.83□□□□□ -0.2
NUP43-202ENST00000367402 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
NUP43-202ENST00000367402 TMF1P82094 1093 aa13.83□□□□□ -0.2
NUP43-202ENST00000367402 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
NUP43-202ENST00000367402 PPIP5K1Q6PFW1 1433 aa13.82□□□□□ -0.2
NUP43-202ENST00000367402 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
NUP43-202ENST00000367402 EVX2Q03828 476 aa13.82□□□□□ -0.2
NUP43-202ENST00000367402 ACEP12821 1306 aa13.82□□□□□ -0.2
NUP43-202ENST00000367402 LMOD2Q6P5Q4 547 aa13.81□□□□□ -0.2
NUP43-202ENST00000367402 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
NUP43-202ENST00000367402 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
NUP43-202ENST00000367402 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
NUP43-202ENST00000367402 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
NUP43-202ENST00000367402 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
NUP43-202ENST00000367402 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
NUP43-202ENST00000367402 RGPD8O14715 1765 aaPredicted RBP13.79□□□□□ -0.2
NUP43-202ENST00000367402 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
NUP43-202ENST00000367402 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
NUP43-202ENST00000367402 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
NUP43-202ENST00000367402 NUTM2AQ8IVF1 878 aaPredicted RBP13.79□□□□□ -0.2
NUP43-202ENST00000367402 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
NUP43-202ENST00000367402 PXDNQ92626 1479 aa13.79□□□□□ -0.2
NUP43-202ENST00000367402 SPATA31A6Q5VVP1 1343 aa13.78□□□□□ -0.2
NUP43-202ENST00000367402 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
NUP43-202ENST00000367402 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
NUP43-202ENST00000367402 DISP3Q9P2K9 1392 aa13.78□□□□□ -0.2
NUP43-202ENST00000367402 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
NUP43-202ENST00000367402 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
NUP43-202ENST00000367402 PNPLA6Q8IY17 1366 aa13.77□□□□□ -0.21
NUP43-202ENST00000367402 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
NUP43-202ENST00000367402 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
NUP43-202ENST00000367402 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
NUP43-202ENST00000367402 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
NUP43-202ENST00000367402 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
NUP43-202ENST00000367402 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
NUP43-202ENST00000367402 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
NUP43-202ENST00000367402 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 ADAMTS2O95450 1211 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
NUP43-202ENST00000367402 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
NUP43-202ENST00000367402 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
NUP43-202ENST00000367402 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
NUP43-202ENST00000367402 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
NUP43-202ENST00000367402 USP6P35125 1406 aa13.71□□□□□ -0.22
NUP43-202ENST00000367402 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
NUP43-202ENST00000367402 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
NUP43-202ENST00000367402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
NUP43-202ENST00000367402 CPSF1Q10570 1443 aaKnown RBP13.7□□□□□ -0.22
NUP43-202ENST00000367402 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
NUP43-202ENST00000367402 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
NUP43-202ENST00000367402 LRP6O75581 1613 aa13.69□□□□□ -0.22
NUP43-202ENST00000367402 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
NUP43-202ENST00000367402 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
NUP43-202ENST00000367402 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
NUP43-202ENST00000367402 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
NUP43-202ENST00000367402 NLRP6P59044 892 aa13.68□□□□□ -0.22
NUP43-202ENST00000367402 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
NUP43-202ENST00000367402 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
NUP43-202ENST00000367402 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
NUP43-202ENST00000367402 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
NUP43-202ENST00000367402 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
NUP43-202ENST00000367402 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
NUP43-202ENST00000367402 SSH2Q76I76 1423 aa13.66□□□□□ -0.22
NUP43-202ENST00000367402 ANKRD36BQ8N2N9 1353 aa13.66□□□□□ -0.22
NUP43-202ENST00000367402 COL22A1Q8NFW1 1626 aaPredicted RBP13.65□□□□□ -0.22
NUP43-202ENST00000367402 NME9Q86XW9 330 aa13.65□□□□□ -0.22
NUP43-202ENST00000367402 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
NUP43-202ENST00000367402 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
NUP43-202ENST00000367402 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
NUP43-202ENST00000367402 AFF2P51816 1311 aa13.64□□□□□ -0.23
NUP43-202ENST00000367402 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
NUP43-202ENST00000367402 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
NUP43-202ENST00000367402 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
NUP43-202ENST00000367402 SOX12O15370 315 aa13.62□□□□□ -0.23
NUP43-202ENST00000367402 GCP02774 474 aa13.62□□□□□ -0.23
NUP43-202ENST00000367402 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
NUP43-202ENST00000367402 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
NUP43-202ENST00000367402 PANK3Q9H999 370 aa13.62□□□□□ -0.23
NUP43-202ENST00000367402 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
NUP43-202ENST00000367402 USP19O94966 1318 aa13.62□□□□□ -0.23
NUP43-202ENST00000367402 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
NUP43-202ENST00000367402 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
NUP43-202ENST00000367402 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
NUP43-202ENST00000367402 USP21Q9UK80 565 aa13.61□□□□□ -0.23
NUP43-202ENST00000367402 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
NUP43-202ENST00000367402 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
NUP43-202ENST00000367402 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
NUP43-202ENST00000367402 COG3Q96JB2 828 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms