RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
RD3-201ENST00000367002 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
RD3-201ENST00000367002 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 PLB1Q6P1J6 1458 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 CNTROBQ8N137 903 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 CCDC27Q2M243 656 aa13.85□□□□□ -0.19
RD3-201ENST00000367002 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
RD3-201ENST00000367002 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 GRPEL1Q9HAV7 217 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
RD3-201ENST00000367002 TPM3P06753 285 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
RD3-201ENST00000367002 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
RD3-201ENST00000367002 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 FOSBP53539 338 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 TRDNQ13061 729 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
RD3-201ENST00000367002 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
RD3-201ENST00000367002 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
RD3-201ENST00000367002 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
RD3-201ENST00000367002 FIBPO43427 364 aa13.83□□□□□ -0.2
RD3-201ENST00000367002 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
RD3-201ENST00000367002 FSD1Q9BTV5 496 aa13.83□□□□□ -0.2
RD3-201ENST00000367002 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
RD3-201ENST00000367002 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
RD3-201ENST00000367002 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
RD3-201ENST00000367002 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
RD3-201ENST00000367002 TPD52L1Q16890 204 aaPredicted RBP13.82□□□□□ -0.2
RD3-201ENST00000367002 FBXW7Q969H0 707 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 IQGAP2Q13576 1575 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 CCT4P50991 539 aaKnown RBP13.82□□□□□ -0.2
RD3-201ENST00000367002 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 TRIM29Q14134 588 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
RD3-201ENST00000367002 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
RD3-201ENST00000367002 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 PSMA5P28066 241 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 RPAP2Q8IXW5 612 aaPredicted RBP13.81□□□□□ -0.2
RD3-201ENST00000367002 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
RD3-201ENST00000367002 CLSTN1O94985 981 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 EVA1CP58658 441 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
RD3-201ENST00000367002 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
RD3-201ENST00000367002 ESPNB1AK53 854 aa13.8□□□□□ -0.2
RD3-201ENST00000367002 PDCP20941 246 aa13.8□□□□□ -0.2
RD3-201ENST00000367002 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
RD3-201ENST00000367002 GOLGA6L1Q8N7Z2 621 aa13.79□□□□□ -0.2
RD3-201ENST00000367002 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
RD3-201ENST00000367002 MPNDQ8N594 471 aa13.79□□□□□ -0.2
RD3-201ENST00000367002 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
RD3-201ENST00000367002 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
RD3-201ENST00000367002 IGHDP01880 384 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 RTEL1-TNFRSF6BF6WH68 1400 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 DISP3Q9P2K9 1392 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 TRIM27P14373 513 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 TSR1Q2NL82 804 aaKnown RBP13.78□□□□□ -0.2
RD3-201ENST00000367002 TRIM5Q9C035 493 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 DCTN1Q14203 1278 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
RD3-201ENST00000367002 TPM1P09493 284 aa13.77□□□□□ -0.21
RD3-201ENST00000367002 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
RD3-201ENST00000367002 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
RD3-201ENST00000367002 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 MARCH6O60337 910 aa13.76□□□□□ -0.21
RD3-201ENST00000367002 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
RD3-201ENST00000367002 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
RD3-201ENST00000367002 SYTL4Q96C24 671 aaPredicted RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
RD3-201ENST00000367002 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
RD3-201ENST00000367002 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
RD3-201ENST00000367002 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
RD3-201ENST00000367002 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
RD3-201ENST00000367002 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
RD3-201ENST00000367002 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
RD3-201ENST00000367002 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
RD3-201ENST00000367002 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
RD3-201ENST00000367002 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
RD3-201ENST00000367002 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
RD3-201ENST00000367002 MCM10Q7L590 875 aa13.74□□□□□ -0.21
RD3-201ENST00000367002 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
RD3-201ENST00000367002 HIP1O00291 1037 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
RD3-201ENST00000367002 TPM2P07951 284 aa13.73□□□□□ -0.21
RD3-201ENST00000367002 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
RD3-201ENST00000367002 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms