RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 USP35Q9P2H5 1018 aa26.44■■□□□ 1.82
T-202ENST00000366871 TMPOP42166 694 aaKnown RBP26.43■■□□□ 1.82
T-202ENST00000366871 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.42■■□□□ 1.82
T-202ENST00000366871 CDC42BPGQ6DT37 1551 aa26.42■■□□□ 1.82
T-202ENST00000366871 SETD1AO15047 1707 aaKnown RBP26.42■■□□□ 1.82
T-202ENST00000366871 PPM1GO15355 546 aaPredicted RBP26.42■■□□□ 1.82
T-202ENST00000366871 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
T-202ENST00000366871 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
T-202ENST00000366871 DIAPH1O60610 1272 aaKnown RBP26.41■■□□□ 1.82
T-202ENST00000366871 RTL5Q5HYW3 569 aaPredicted RBP26.41■■□□□ 1.82
T-202ENST00000366871 SIRT1Q96EB6 747 aa26.4■■□□□ 1.82
T-202ENST00000366871 CABP1Q9NZU7 370 aa26.4■■□□□ 1.82
T-202ENST00000366871 U2SURPO15042 1029 aaKnown RBP26.39■■□□□ 1.82
T-202ENST00000366871 NBR1Q14596 966 aa26.39■■□□□ 1.82
T-202ENST00000366871 FCHSD2O94868 740 aa26.38■■□□□ 1.81
T-202ENST00000366871 RGS3P49796 1198 aa26.38■■□□□ 1.81
T-202ENST00000366871 ZKSCAN2Q63HK3 967 aa26.37■■□□□ 1.81
T-202ENST00000366871 TRIM35Q9UPQ4 493 aa26.37■■□□□ 1.81
T-202ENST00000366871 HDGFP51858 240 aaKnown RBP26.37■■□□□ 1.81
T-202ENST00000366871 TSPOAP1O95153 1857 aa26.36■■□□□ 1.81
T-202ENST00000366871 RWDD1Q9H446 243 aaPredicted RBP26.34■■□□□ 1.81
T-202ENST00000366871 MVPQ14764 893 aaKnown RBP26.34■■□□□ 1.81
T-202ENST00000366871 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
T-202ENST00000366871 RLBP1P12271 317 aa26.33■■□□□ 1.81
T-202ENST00000366871 VIRMAQ69YN4 1812 aaKnown RBP26.33■■□□□ 1.81
T-202ENST00000366871 CPSF1Q10570 1443 aaKnown RBP26.33■■□□□ 1.8
T-202ENST00000366871 DEKP35659 375 aaKnown RBP26.32■■□□□ 1.8
T-202ENST00000366871 EDC4Q6P2E9 1401 aaKnown RBP26.32■■□□□ 1.8
T-202ENST00000366871 TECPR2O15040 1411 aa26.31■■□□□ 1.8
T-202ENST00000366871 DZIP1LQ8IYY4 767 aaKnown RBP26.31■■□□□ 1.8
T-202ENST00000366871 ZNF428Q96B54 188 aa26.31■■□□□ 1.8
T-202ENST00000366871 NRXN3Q9Y4C0 1643 aa26.3■■□□□ 1.8
T-202ENST00000366871 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
T-202ENST00000366871 RIPK4P57078 832 aa26.3■■□□□ 1.8
T-202ENST00000366871 KNDC1Q76NI1 1749 aa26.29■■□□□ 1.8
T-202ENST00000366871 DAXXQ9UER7 740 aaPredicted RBP26.29■■□□□ 1.8
T-202ENST00000366871 PCDHB15Q9Y5E8 787 aa26.29■■□□□ 1.8
T-202ENST00000366871 WAPLQ7Z5K2 1190 aa26.28■■□□□ 1.8
T-202ENST00000366871 AATKQ6ZMQ8 1374 aa26.28■■□□□ 1.8
T-202ENST00000366871 NEFMP07197 916 aa26.28■■□□□ 1.8
T-202ENST00000366871 EXOSC9Q06265 439 aaKnown RBP26.28■■□□□ 1.8
T-202ENST00000366871 POLKQ9UBT6 870 aa26.28■■□□□ 1.8
T-202ENST00000366871 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
T-202ENST00000366871 BCL2L13Q9BXK5 485 aa26.27■■□□□ 1.8
T-202ENST00000366871 ALDH1L2Q3SY69 923 aa26.26■■□□□ 1.79
T-202ENST00000366871 TSR2Q969E8 191 aaKnown RBP26.26■■□□□ 1.79
T-202ENST00000366871 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
T-202ENST00000366871 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
T-202ENST00000366871 SMC4Q9NTJ3 1288 aa26.26■■□□□ 1.79
T-202ENST00000366871 PPIP5K1Q6PFW1 1433 aa26.26■■□□□ 1.79
T-202ENST00000366871 DDX19BQ9UMR2 479 aa26.25■■□□□ 1.79
T-202ENST00000366871 CALD1Q05682 793 aaKnown RBP26.25■■□□□ 1.79
T-202ENST00000366871 RSPH6AQ9H0K4 717 aa26.25■■□□□ 1.79
T-202ENST00000366871 IPO8O15397 1037 aaKnown RBP26.24■■□□□ 1.79
T-202ENST00000366871 BRPF1P55201 1214 aaPredicted RBP26.24■■□□□ 1.79
T-202ENST00000366871 KIF16BQ96L93 1317 aa26.24■■□□□ 1.79
T-202ENST00000366871 ATF7IPQ6VMQ6 1270 aa26.23■■□□□ 1.79
T-202ENST00000366871 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
T-202ENST00000366871 LRRC7Q96NW7 1537 aa26.23■■□□□ 1.79
T-202ENST00000366871 METP08581 1390 aa26.22■■□□□ 1.79
T-202ENST00000366871 SSH1Q8WYL5 1049 aa26.22■■□□□ 1.79
T-202ENST00000366871 CPS1P31327 1500 aa26.22■■□□□ 1.79
T-202ENST00000366871 TNNQ9UQP3 1299 aa26.22■■□□□ 1.79
T-202ENST00000366871 HDAC1Q13547 482 aaPredicted RBP26.21■■□□□ 1.79
T-202ENST00000366871 CCDC61Q9Y6R9 512 aa26.21■■□□□ 1.79
T-202ENST00000366871 TRIM27P14373 513 aa26.21■■□□□ 1.79
T-202ENST00000366871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.21■■□□□ 1.79
T-202ENST00000366871 ZNF692Q9BU19 519 aaPredicted RBP26.2■■□□□ 1.78
T-202ENST00000366871 MLECQ14165 292 aa26.19■■□□□ 1.78
T-202ENST00000366871 PDZRN3Q9UPQ7 1066 aa26.19■■□□□ 1.78
T-202ENST00000366871 TNRQ92752 1358 aa26.18■■□□□ 1.78
T-202ENST00000366871 PRKAR2BP31323 418 aa26.18■■□□□ 1.78
T-202ENST00000366871 NFE2L2Q16236 605 aa26.18■■□□□ 1.78
T-202ENST00000366871 LAS1LQ9Y4W2 734 aaKnown RBP26.18■■□□□ 1.78
T-202ENST00000366871 MAP2P11137 1827 aaKnown RBP26.17■■□□□ 1.78
T-202ENST00000366871 NUDT16Q96DE0 195 aaKnown RBP26.17■■□□□ 1.78
T-202ENST00000366871 MON2Q7Z3U7 1717 aa26.17■■□□□ 1.78
T-202ENST00000366871 IL13P35225 146 aa26.16■■□□□ 1.78
T-202ENST00000366871 USP19O94966 1318 aa26.16■■□□□ 1.78
T-202ENST00000366871 TMEM2Q9UHN6 1383 aa26.16■■□□□ 1.78
T-202ENST00000366871 KIF13AQ9H1H9 1805 aa26.15■■□□□ 1.78
T-202ENST00000366871 NOB1Q9ULX3 412 aaKnown RBP26.14■■□□□ 1.78
T-202ENST00000366871 CHMP4BQ9H444 224 aaKnown RBP26.14■■□□□ 1.77
T-202ENST00000366871 LMOD3Q0VAK6 560 aa26.13■■□□□ 1.77
T-202ENST00000366871 COG3Q96JB2 828 aa26.13■■□□□ 1.77
T-202ENST00000366871 TXNDC2Q86VQ3 553 aa26.13■■□□□ 1.77
T-202ENST00000366871 ARHGAP45Q92619 1136 aa26.12■■□□□ 1.77
T-202ENST00000366871 UPF2Q9HAU5 1272 aaKnown RBP26.12■■□□□ 1.77
T-202ENST00000366871 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
T-202ENST00000366871 IFT57Q9NWB7 429 aa26.12■■□□□ 1.77
T-202ENST00000366871 GNAI1P63096 354 aa26.11■■□□□ 1.77
T-202ENST00000366871 ZBTB40Q9NUA8 1239 aa26.11■■□□□ 1.77
T-202ENST00000366871 UBR1Q8IWV7 1749 aa26.1■■□□□ 1.77
T-202ENST00000366871 ITPRIPQ8IWB1 547 aa26.1■■□□□ 1.77
T-202ENST00000366871 C3P01024 1663 aa26.1■■□□□ 1.77
T-202ENST00000366871 NME9Q86XW9 330 aa26.09■■□□□ 1.77
T-202ENST00000366871 SMC5Q8IY18 1101 aa26.09■■□□□ 1.77
T-202ENST00000366871 BCL11AQ9H165 835 aa26.09■■□□□ 1.77
T-202ENST00000366871 BECN1Q14457 450 aa26.08■■□□□ 1.77
T-202ENST00000366871 ZNF853P0CG23 659 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms