RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
CALD1-202ENST00000361901 HSPA2P54652 639 aa11.65□□□□□ -0.54
CALD1-202ENST00000361901 FOXO3O43524 673 aa11.65□□□□□ -0.54
CALD1-202ENST00000361901 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
CALD1-202ENST00000361901 SKAP1Q86WV1 359 aa11.65□□□□□ -0.54
CALD1-202ENST00000361901 FAM43AQ8N2R8 423 aa11.65□□□□□ -0.54
CALD1-202ENST00000361901 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
CALD1-202ENST00000361901 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
CALD1-202ENST00000361901 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
CALD1-202ENST00000361901 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
CALD1-202ENST00000361901 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
CALD1-202ENST00000361901 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
CALD1-202ENST00000361901 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
CALD1-202ENST00000361901 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
CALD1-202ENST00000361901 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
CALD1-202ENST00000361901 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
CALD1-202ENST00000361901 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
CALD1-202ENST00000361901 MYOM2P54296 1465 aa11.63□□□□□ -0.55
CALD1-202ENST00000361901 PPIP5K1Q6PFW1 1433 aa11.63□□□□□ -0.55
CALD1-202ENST00000361901 TMPOP42166 694 aaKnown RBP11.62□□□□□ -0.55
CALD1-202ENST00000361901 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 ARID3AQ99856 593 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 MAP3K4Q9Y6R4 1608 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 ATF3P18847 181 aa11.62□□□□□ -0.55
CALD1-202ENST00000361901 APBB1O00213 710 aa11.61□□□□□ -0.55
CALD1-202ENST00000361901 LRPPRCP42704 1394 aaKnown RBP11.61□□□□□ -0.55
CALD1-202ENST00000361901 POLKQ9UBT6 870 aa11.61□□□□□ -0.55
CALD1-202ENST00000361901 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
CALD1-202ENST00000361901 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
CALD1-202ENST00000361901 FGD1P98174 961 aa11.6□□□□□ -0.55
CALD1-202ENST00000361901 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CALD1-202ENST00000361901 USHBP1Q8N6Y0 703 aa11.59□□□□□ -0.55
CALD1-202ENST00000361901 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
CALD1-202ENST00000361901 FAM83GA6ND36 823 aa11.58□□□□□ -0.55
CALD1-202ENST00000361901 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.55
CALD1-202ENST00000361901 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.55
CALD1-202ENST00000361901 CAMSAP1Q5T5Y3 1602 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 IPO8O15397 1037 aaKnown RBP11.58□□□□□ -0.56
CALD1-202ENST00000361901 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
CALD1-202ENST00000361901 TBX22Q9Y458 520 aa11.57□□□□□ -0.56
CALD1-202ENST00000361901 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
CALD1-202ENST00000361901 MCM10Q7L590 875 aa11.57□□□□□ -0.56
CALD1-202ENST00000361901 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
CALD1-202ENST00000361901 FCHSD2O94868 740 aa11.57□□□□□ -0.56
CALD1-202ENST00000361901 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
CALD1-202ENST00000361901 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
CALD1-202ENST00000361901 CLTCQ00610 1675 aaKnown RBP11.56□□□□□ -0.56
CALD1-202ENST00000361901 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 AAMPQ13685 434 aa11.56□□□□□ -0.56
CALD1-202ENST00000361901 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
CALD1-202ENST00000361901 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
CALD1-202ENST00000361901 MS4A1P11836 297 aa11.55□□□□□ -0.56
CALD1-202ENST00000361901 NFKBIBQ15653 356 aa11.55□□□□□ -0.56
CALD1-202ENST00000361901 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
CALD1-202ENST00000361901 PUS7Q96PZ0 661 aaKnown RBP11.55□□□□□ -0.56
CALD1-202ENST00000361901 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
CALD1-202ENST00000361901 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
CALD1-202ENST00000361901 L1TD1Q5T7N2 865 aaKnown RBP11.54□□□□□ -0.56
CALD1-202ENST00000361901 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 DEPDC5O75140 1603 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 GLI2P10070 1586 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 TNNQ9UQP3 1299 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 PRR36Q9H6K5 1346 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 GNAI1P63096 354 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 SYNMO15061 1565 aa11.54□□□□□ -0.56
CALD1-202ENST00000361901 MROH2AA6NES4 1674 aa11.53□□□□□ -0.56
CALD1-202ENST00000361901 NSD2O96028 1365 aa11.53□□□□□ -0.56
CALD1-202ENST00000361901 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
CALD1-202ENST00000361901 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
CALD1-202ENST00000361901 ZNF428Q96B54 188 aa11.53□□□□□ -0.56
CALD1-202ENST00000361901 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
CALD1-202ENST00000361901 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.56
CALD1-202ENST00000361901 RARSP54136 660 aaKnown RBP11.52□□□□□ -0.57
CALD1-202ENST00000361901 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
CALD1-202ENST00000361901 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
CALD1-202ENST00000361901 UPF2Q9HAU5 1272 aaKnown RBP11.52□□□□□ -0.57
CALD1-202ENST00000361901 RICTORQ6R327 1708 aa11.52□□□□□ -0.57
CALD1-202ENST00000361901 TWISTNBQ3B726 338 aaPredicted RBP11.51□□□□□ -0.57
CALD1-202ENST00000361901 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
CALD1-202ENST00000361901 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
CALD1-202ENST00000361901 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
CALD1-202ENST00000361901 TEFQ10587 303 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms