RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CT47B1P0C2W7 299 aaPredicted RBP34.01■■■■□ 3.04
CUEDC1-201ENST00000360238 COG6Q9Y2V7 657 aa34■■■■□ 3.03
CUEDC1-201ENST00000360238 U2SURPO15042 1029 aaKnown RBP33.99■■■■□ 3.03
CUEDC1-201ENST00000360238 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.99■■■■□ 3.03
CUEDC1-201ENST00000360238 FRAT1Q92837 279 aaPredicted RBP33.99■■■■□ 3.03
CUEDC1-201ENST00000360238 MAPK8IP3Q9UPT6 1336 aa33.99■■■■□ 3.03
CUEDC1-201ENST00000360238 TMPOP42166 694 aaKnown RBP33.97■■■■□ 3.03
CUEDC1-201ENST00000360238 DDRGK1Q96HY6 314 aa33.96■■■■□ 3.03
CUEDC1-201ENST00000360238 MLECQ14165 292 aa33.96■■■■□ 3.03
CUEDC1-201ENST00000360238 C8orf34Q49A92 452 aa33.96■■■■□ 3.03
CUEDC1-201ENST00000360238 DIAPH1O60610 1272 aaKnown RBP33.95■■■■□ 3.03
CUEDC1-201ENST00000360238 PNNQ9H307 717 aaKnown RBP33.95■■■■□ 3.03
CUEDC1-201ENST00000360238 IL16Q14005 1332 aa33.95■■■■□ 3.02
CUEDC1-201ENST00000360238 IGHDP01880 384 aa33.94■■■■□ 3.02
CUEDC1-201ENST00000360238 WAPLQ7Z5K2 1190 aa33.94■■■■□ 3.02
CUEDC1-201ENST00000360238 ZMYM3Q14202 1370 aa33.94■■■■□ 3.02
CUEDC1-201ENST00000360238 TECPR2O15040 1411 aa33.92■■■■□ 3.02
CUEDC1-201ENST00000360238 CPS1P31327 1500 aa33.92■■■■□ 3.02
CUEDC1-201ENST00000360238 LRRC7Q96NW7 1537 aa33.92■■■■□ 3.02
CUEDC1-201ENST00000360238 CPSF1Q10570 1443 aaKnown RBP33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 MAP2P11137 1827 aaKnown RBP33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 TRIM35Q9UPQ4 493 aa33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 FAM135BQ49AJ0 1406 aa33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 EDC4Q6P2E9 1401 aaKnown RBP33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 RGS3P49796 1198 aa33.91■■■■□ 3.02
CUEDC1-201ENST00000360238 MON2Q7Z3U7 1717 aa33.9■■■■□ 3.02
CUEDC1-201ENST00000360238 PMFBP1Q8TBY8 1022 aa33.89■■■■□ 3.02
CUEDC1-201ENST00000360238 ESF1Q9H501 851 aaKnown RBP33.89■■■■□ 3.02
CUEDC1-201ENST00000360238 METP08581 1390 aa33.89■■■■□ 3.02
CUEDC1-201ENST00000360238 UBR1Q8IWV7 1749 aa33.88■■■■□ 3.01
CUEDC1-201ENST00000360238 PPIP5K1Q6PFW1 1433 aa33.87■■■■□ 3.01
CUEDC1-201ENST00000360238 RLBP1P12271 317 aa33.87■■■■□ 3.01
CUEDC1-201ENST00000360238 WASLO00401 505 aaPredicted RBP33.87■■■■□ 3.01
CUEDC1-201ENST00000360238 BCL2L13Q9BXK5 485 aa33.87■■■■□ 3.01
CUEDC1-201ENST00000360238 SIRT1Q96EB6 747 aa33.86■■■■□ 3.01
CUEDC1-201ENST00000360238 AKAP12Q02952 1782 aa33.86■■■■□ 3.01
CUEDC1-201ENST00000360238 NBR1Q14596 966 aa33.85■■■■□ 3.01
CUEDC1-201ENST00000360238 ITSN1Q15811 1721 aa33.85■■■■□ 3.01
CUEDC1-201ENST00000360238 HDGFP51858 240 aaKnown RBP33.85■■■■□ 3.01
CUEDC1-201ENST00000360238 FCHSD2O94868 740 aa33.84■■■■□ 3.01
CUEDC1-201ENST00000360238 TNRQ92752 1358 aa33.84■■■■□ 3.01
CUEDC1-201ENST00000360238 TSR2Q969E8 191 aaKnown RBP33.84■■■■□ 3.01
CUEDC1-201ENST00000360238 ZKSCAN2Q63HK3 967 aa33.83■■■■□ 3.01
CUEDC1-201ENST00000360238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.83■■■■□ 3.01
CUEDC1-201ENST00000360238 CDK12Q9NYV4 1490 aaPredicted RBP33.81■■■■□ 3
CUEDC1-201ENST00000360238 RIPK4P57078 832 aa33.81■■■■□ 3
CUEDC1-201ENST00000360238 POLKQ9UBT6 870 aa33.81■■■■□ 3
CUEDC1-201ENST00000360238 TNNQ9UQP3 1299 aa33.81■■■■□ 3
CUEDC1-201ENST00000360238 EXOSC9Q06265 439 aaKnown RBP33.8■■■■□ 3
CUEDC1-201ENST00000360238 MVPQ14764 893 aaKnown RBP33.8■■■■□ 3
CUEDC1-201ENST00000360238 C3P01024 1663 aa33.79■■■■□ 3
CUEDC1-201ENST00000360238 AATKQ6ZMQ8 1374 aa33.77■■■■□ 3
CUEDC1-201ENST00000360238 RSPH6AQ9H0K4 717 aa33.77■■■■□ 3
CUEDC1-201ENST00000360238 PCDHB15Q9Y5E8 787 aa33.77■■■■□ 3
CUEDC1-201ENST00000360238 TMEM2Q9UHN6 1383 aa33.76■■■■□ 3
CUEDC1-201ENST00000360238 DZIP1LQ8IYY4 767 aaKnown RBP33.76■■■□□ 2.99
CUEDC1-201ENST00000360238 SMC4Q9NTJ3 1288 aa33.76■■■□□ 2.99
CUEDC1-201ENST00000360238 FTSJ3Q8IY81 847 aaKnown RBP33.75■■■□□ 2.99
CUEDC1-201ENST00000360238 TXNDC2Q86VQ3 553 aa33.74■■■□□ 2.99
CUEDC1-201ENST00000360238 RTL5Q5HYW3 569 aaPredicted RBP33.74■■■□□ 2.99
CUEDC1-201ENST00000360238 NEFMP07197 916 aa33.72■■■□□ 2.99
CUEDC1-201ENST00000360238 NUDT16Q96DE0 195 aaKnown RBP33.72■■■□□ 2.99
CUEDC1-201ENST00000360238 RWDD1Q9H446 243 aaPredicted RBP33.72■■■□□ 2.99
CUEDC1-201ENST00000360238 PRKAR2BP31323 418 aa33.71■■■□□ 2.99
CUEDC1-201ENST00000360238 CCDC61Q9Y6R9 512 aa33.71■■■□□ 2.99
CUEDC1-201ENST00000360238 SSH1Q8WYL5 1049 aa33.71■■■□□ 2.99
CUEDC1-201ENST00000360238 TOPAZ1Q8N9V7 1692 aa33.69■■■□□ 2.98
CUEDC1-201ENST00000360238 PPM1GO15355 546 aaPredicted RBP33.69■■■□□ 2.98
CUEDC1-201ENST00000360238 TRIM27P14373 513 aa33.68■■■□□ 2.98
CUEDC1-201ENST00000360238 NME9Q86XW9 330 aa33.68■■■□□ 2.98
CUEDC1-201ENST00000360238 ADAMTS13Q76LX8 1427 aa33.67■■■□□ 2.98
CUEDC1-201ENST00000360238 KIF16BQ96L93 1317 aa33.67■■■□□ 2.98
CUEDC1-201ENST00000360238 NRKQ7Z2Y5 1582 aa33.67■■■□□ 2.98
CUEDC1-201ENST00000360238 ATF7IPQ6VMQ6 1270 aa33.67■■■□□ 2.98
CUEDC1-201ENST00000360238 EMILIN1Q9Y6C2 1016 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 FBLN1P23142 703 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 IL13P35225 146 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 NFE2L2Q16236 605 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 ALDH1L2Q3SY69 923 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 DDX19BQ9UMR2 479 aa33.65■■■□□ 2.98
CUEDC1-201ENST00000360238 ZNF428Q96B54 188 aa33.64■■■□□ 2.98
CUEDC1-201ENST00000360238 COG3Q96JB2 828 aa33.64■■■□□ 2.98
CUEDC1-201ENST00000360238 USP35Q9P2H5 1018 aa33.64■■■□□ 2.98
CUEDC1-201ENST00000360238 PLEKHG1Q9ULL1 1385 aa33.63■■■□□ 2.97
CUEDC1-201ENST00000360238 DEKP35659 375 aaKnown RBP33.63■■■□□ 2.97
CUEDC1-201ENST00000360238 DLG5Q8TDM6 1919 aa33.63■■■□□ 2.97
CUEDC1-201ENST00000360238 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.63■■■□□ 2.97
CUEDC1-201ENST00000360238 CALD1Q05682 793 aaKnown RBP33.62■■■□□ 2.97
CUEDC1-201ENST00000360238 ZNF692Q9BU19 519 aaPredicted RBP33.62■■■□□ 2.97
CUEDC1-201ENST00000360238 ROBO2Q9HCK4 1378 aa33.62■■■□□ 2.97
CUEDC1-201ENST00000360238 PDZRN3Q9UPQ7 1066 aa33.62■■■□□ 2.97
CUEDC1-201ENST00000360238 LAS1LQ9Y4W2 734 aaKnown RBP33.62■■■□□ 2.97
CUEDC1-201ENST00000360238 IPO8O15397 1037 aaKnown RBP33.6■■■□□ 2.97
CUEDC1-201ENST00000360238 DAXXQ9UER7 740 aaPredicted RBP33.6■■■□□ 2.97
CUEDC1-201ENST00000360238 NOB1Q9ULX3 412 aaKnown RBP33.6■■■□□ 2.97
CUEDC1-201ENST00000360238 PRR36Q9H6K5 1346 aa33.59■■■□□ 2.97
CUEDC1-201ENST00000360238 BRPF1P55201 1214 aaPredicted RBP33.58■■■□□ 2.97
CUEDC1-201ENST00000360238 HMOX1P09601 288 aa33.57■■■□□ 2.96
CUEDC1-201ENST00000360238 HDAC1Q13547 482 aaPredicted RBP33.57■■■□□ 2.96
CUEDC1-201ENST00000360238 PHACTR3Q96KR7 559 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms