RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NUTM2GQ5VZR2 741 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 SYNMO15061 1565 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
SSU72-202ENST00000359060 MYOM2P54296 1465 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 SBNO2Q9Y2G9 1366 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 KIF1BO60333 1816 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
SSU72-202ENST00000359060 WASLO00401 505 aaPredicted RBP14.04□□□□□ -0.16
SSU72-202ENST00000359060 TRIM27P14373 513 aa14.04□□□□□ -0.16
SSU72-202ENST00000359060 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
SSU72-202ENST00000359060 EFCAB6Q5THR3 1501 aa14.04□□□□□ -0.16
SSU72-202ENST00000359060 CEBPAP49715 358 aaPredicted RBP14.04□□□□□ -0.16
SSU72-202ENST00000359060 NCKAP5LQ9HCH0 1330 aa14.04□□□□□ -0.16
SSU72-202ENST00000359060 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
SSU72-202ENST00000359060 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
SSU72-202ENST00000359060 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
SSU72-202ENST00000359060 PUS7Q96PZ0 661 aaKnown RBP14.03□□□□□ -0.16
SSU72-202ENST00000359060 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SSU72-202ENST00000359060 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
SSU72-202ENST00000359060 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
SSU72-202ENST00000359060 YTHDC2Q9H6S0 1430 aaKnown RBP14.02□□□□□ -0.17
SSU72-202ENST00000359060 MAP3K4Q9Y6R4 1608 aa14.02□□□□□ -0.17
SSU72-202ENST00000359060 C8orf34Q49A92 452 aa14.02□□□□□ -0.17
SSU72-202ENST00000359060 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
SSU72-202ENST00000359060 TRMT2AQ8IZ69 625 aaKnown RBP14.01□□□□□ -0.17
SSU72-202ENST00000359060 GZF1Q9H116 711 aaPredicted RBP14.01□□□□□ -0.17
SSU72-202ENST00000359060 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
SSU72-202ENST00000359060 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
SSU72-202ENST00000359060 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
SSU72-202ENST00000359060 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
SSU72-202ENST00000359060 API5Q9BZZ5 524 aaKnown RBP14.01□□□□□ -0.17
SSU72-202ENST00000359060 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
SSU72-202ENST00000359060 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
SSU72-202ENST00000359060 NEO1Q92859 1461 aa14□□□□□ -0.17
SSU72-202ENST00000359060 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
SSU72-202ENST00000359060 CASC1Q6TDU7 716 aa14□□□□□ -0.17
SSU72-202ENST00000359060 C22orf23Q9BZE7 217 aa14□□□□□ -0.17
SSU72-202ENST00000359060 NLRP6P59044 892 aa13.99□□□□□ -0.17
SSU72-202ENST00000359060 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
SSU72-202ENST00000359060 LAMC1P11047 1609 aa13.98□□□□□ -0.17
SSU72-202ENST00000359060 GSE1Q14687 1217 aa13.98□□□□□ -0.17
SSU72-202ENST00000359060 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SSU72-202ENST00000359060 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
SSU72-202ENST00000359060 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
SSU72-202ENST00000359060 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
SSU72-202ENST00000359060 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
SSU72-202ENST00000359060 INO80Q9ULG1 1556 aaPredicted RBP13.97□□□□□ -0.17
SSU72-202ENST00000359060 ABCC3O15438 1527 aa13.97□□□□□ -0.17
SSU72-202ENST00000359060 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
SSU72-202ENST00000359060 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
SSU72-202ENST00000359060 CEP152O94986 1710 aa13.96□□□□□ -0.17
SSU72-202ENST00000359060 MCM10Q7L590 875 aa13.96□□□□□ -0.17
SSU72-202ENST00000359060 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
SSU72-202ENST00000359060 MIS18AQ9NYP9 233 aa13.95□□□□□ -0.18
SSU72-202ENST00000359060 SEC24BO95487 1268 aa13.95□□□□□ -0.18
SSU72-202ENST00000359060 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
SSU72-202ENST00000359060 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
SSU72-202ENST00000359060 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
SSU72-202ENST00000359060 HMMRO75330 724 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 KIDINS220Q9ULH0 1771 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 TSPYL6Q8N831 410 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 CFAP74Q9C0B2 1584 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 OS9Q13438 667 aaPredicted RBP13.93□□□□□ -0.18
SSU72-202ENST00000359060 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
SSU72-202ENST00000359060 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 CHD1LQ86WJ1 897 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 ACEP12821 1306 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 IL16Q14005 1332 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 ABTB2Q8N961 1025 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 AMOTL2Q9Y2J4 779 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
SSU72-202ENST00000359060 IFT57Q9NWB7 429 aa13.92□□□□□ -0.18
SSU72-202ENST00000359060 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
SSU72-202ENST00000359060 RBM33Q96EV2 1170 aaKnown RBP13.91□□□□□ -0.18
SSU72-202ENST00000359060 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 EIF5BO60841 1220 aaKnown RBP13.91□□□□□ -0.18
SSU72-202ENST00000359060 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 TNRQ92752 1358 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
SSU72-202ENST00000359060 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
SSU72-202ENST00000359060 THEMISQ8N1K5 641 aaPredicted RBP13.9□□□□□ -0.18
SSU72-202ENST00000359060 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 PSME1Q06323 249 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
SSU72-202ENST00000359060 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
SSU72-202ENST00000359060 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SSU72-202ENST00000359060 PLEKHF1Q96S99 279 aa13.88□□□□□ -0.19
SSU72-202ENST00000359060 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
SSU72-202ENST00000359060 VAMP4O75379 141 aa13.87□□□□□ -0.19
SSU72-202ENST00000359060 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms