RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PIK3C2GO75747 1445 aa15.15■□□□□ 0.02
COL20A1-201ENST00000358894 RLBP1P12271 317 aa15.15■□□□□ 0.02
COL20A1-201ENST00000358894 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
COL20A1-201ENST00000358894 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
COL20A1-201ENST00000358894 C8orf34Q49A92 452 aa15.15■□□□□ 0.02
COL20A1-201ENST00000358894 NME9Q86XW9 330 aa15.14■□□□□ 0.01
COL20A1-201ENST00000358894 MAST1Q9Y2H9 1570 aa15.14■□□□□ 0.01
COL20A1-201ENST00000358894 EIF2S2P20042 333 aaKnown RBP15.14■□□□□ 0.01
COL20A1-201ENST00000358894 ST18O60284 1047 aa15.14■□□□□ 0.01
COL20A1-201ENST00000358894 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
COL20A1-201ENST00000358894 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
COL20A1-201ENST00000358894 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
COL20A1-201ENST00000358894 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
COL20A1-201ENST00000358894 SLC26A8Q96RN1 970 aa15.13■□□□□ 0.01
COL20A1-201ENST00000358894 DDX49Q9Y6V7 483 aaKnown RBP15.13■□□□□ 0.01
COL20A1-201ENST00000358894 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
COL20A1-201ENST00000358894 CFAP65Q6ZU64 1925 aaKnown RBP15.12■□□□□ 0.01
COL20A1-201ENST00000358894 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
COL20A1-201ENST00000358894 FYB1O15117 783 aa15.12■□□□□ 0.01
COL20A1-201ENST00000358894 POLR3AO14802 1390 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-201ENST00000358894 CHD1LQ86WJ1 897 aa15.12■□□□□ 0.01
COL20A1-201ENST00000358894 NLRP6P59044 892 aa15.11■□□□□ 0.01
COL20A1-201ENST00000358894 NUDT16Q96DE0 195 aaKnown RBP15.11■□□□□ 0.01
COL20A1-201ENST00000358894 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
COL20A1-201ENST00000358894 ZMYND15Q9H091 742 aa15.11■□□□□ 0.01
COL20A1-201ENST00000358894 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
COL20A1-201ENST00000358894 CCDC61Q9Y6R9 512 aa15.11■□□□□ 0.01
COL20A1-201ENST00000358894 FGD1P98174 961 aa15.1■□□□□ 0.01
COL20A1-201ENST00000358894 CDC42BPAQ5VT25 1732 aa15.1■□□□□ 0.01
COL20A1-201ENST00000358894 CDC45O75419 566 aa15.1■□□□□ 0.01
COL20A1-201ENST00000358894 TTC37Q6PGP7 1564 aa15.1■□□□□ 0.01
COL20A1-201ENST00000358894 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
COL20A1-201ENST00000358894 GCC1Q96CN9 775 aa15.09■□□□□ 0.01
COL20A1-201ENST00000358894 ANKRD36BQ8N2N9 1353 aa15.09■□□□□ 0.01
COL20A1-201ENST00000358894 SLC4A2P04920 1241 aa15.08■□□□□ 0.01
COL20A1-201ENST00000358894 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
COL20A1-201ENST00000358894 TRAK2O60296 914 aa15.08■□□□□ 0
COL20A1-201ENST00000358894 SEC24BO95487 1268 aa15.08■□□□□ 0
COL20A1-201ENST00000358894 PTMSP20962 102 aa15.08■□□□□ 0
COL20A1-201ENST00000358894 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
COL20A1-201ENST00000358894 REC8O95072 547 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 TEFQ10587 303 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
COL20A1-201ENST00000358894 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 MCM10Q7L590 875 aa15.07■□□□□ 0
COL20A1-201ENST00000358894 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
COL20A1-201ENST00000358894 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
COL20A1-201ENST00000358894 ATP7AQ04656 1500 aa15.06■□□□□ 0
COL20A1-201ENST00000358894 FAM83GA6ND36 823 aa15.06■□□□□ 0
COL20A1-201ENST00000358894 ATP10AO60312 1499 aa15.06■□□□□ 0
COL20A1-201ENST00000358894 NSD2O96028 1365 aa15.05■□□□□ 0
COL20A1-201ENST00000358894 NPC1L1Q9UHC9 1359 aa15.05■□□□□ 0
COL20A1-201ENST00000358894 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ 0
COL20A1-201ENST00000358894 ABCC11Q96J66 1382 aa15.05■□□□□ -0
COL20A1-201ENST00000358894 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
COL20A1-201ENST00000358894 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 A0A1W2PP64 1363 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 ZNF428Q96B54 188 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
COL20A1-201ENST00000358894 PREX2Q70Z35 1606 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 GOLGA6L4A6NEF3 574 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 MCM4P33991 863 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 CCDC27Q2M243 656 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 ALDH1L2Q3SY69 923 aa15.03■□□□□ -0
COL20A1-201ENST00000358894 UGGT1Q9NYU2 1555 aa15.02■□□□□ -0
COL20A1-201ENST00000358894 ABTB2Q8N961 1025 aa15.02■□□□□ -0
COL20A1-201ENST00000358894 MCTP1Q6DN14 999 aa15.02□□□□□ -0.01
COL20A1-201ENST00000358894 TBC1D32Q96NH3 1257 aa15.02□□□□□ -0.01
COL20A1-201ENST00000358894 ERCC6L2Q5T890 1561 aa15.02□□□□□ -0.01
COL20A1-201ENST00000358894 SKOR2Q2VWA4 1001 aaPredicted RBP15.02□□□□□ -0.01
COL20A1-201ENST00000358894 PSME1Q06323 249 aa15.01□□□□□ -0.01
COL20A1-201ENST00000358894 PTPRTO14522 1441 aa15.01□□□□□ -0.01
COL20A1-201ENST00000358894 MBIPQ9NS73 344 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 IFT57Q9NWB7 429 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
COL20A1-201ENST00000358894 POLKQ9UBT6 870 aa15□□□□□ -0.01
COL20A1-201ENST00000358894 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
COL20A1-201ENST00000358894 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
COL20A1-201ENST00000358894 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
COL20A1-201ENST00000358894 CCDC9Q9Y3X0 531 aaKnown RBP14.99□□□□□ -0.01
COL20A1-201ENST00000358894 INSRP06213 1382 aa14.99□□□□□ -0.01
COL20A1-201ENST00000358894 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
COL20A1-201ENST00000358894 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
COL20A1-201ENST00000358894 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
COL20A1-201ENST00000358894 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
COL20A1-201ENST00000358894 TSPYL6Q8N831 410 aa14.98□□□□□ -0.01
COL20A1-201ENST00000358894 GPATCH3Q96I76 525 aa14.98□□□□□ -0.01
COL20A1-201ENST00000358894 PRDM15P57071 1507 aaPredicted RBP14.98□□□□□ -0.01
COL20A1-201ENST00000358894 NEK4P51957 841 aa14.98□□□□□ -0.01
COL20A1-201ENST00000358894 F6X3S4 739 aa14.97□□□□□ -0.01
COL20A1-201ENST00000358894 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms