RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 THUMPD2Q9BTF0 503 aaKnown RBP26.05■■□□□ 1.76
COL13A1-202ENST00000357811 CAMSAP1Q5T5Y3 1602 aa26.05■■□□□ 1.76
COL13A1-202ENST00000357811 NEXMIFQ5QGS0 1516 aa26.05■■□□□ 1.76
COL13A1-202ENST00000357811 HMOX1P09601 288 aa26.04■■□□□ 1.76
COL13A1-202ENST00000357811 DIAPH1O60610 1272 aaKnown RBP26.03■■□□□ 1.76
COL13A1-202ENST00000357811 ELL2O00472 640 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-202ENST00000357811 UPF2Q9HAU5 1272 aaKnown RBP26.03■■□□□ 1.76
COL13A1-202ENST00000357811 ABCC11Q96J66 1382 aa26.02■■□□□ 1.76
COL13A1-202ENST00000357811 ARHGEF28Q8N1W1 1705 aaKnown RBP26.02■■□□□ 1.76
COL13A1-202ENST00000357811 MFAP1P55081 439 aaKnown RBP26.01■■□□□ 1.76
COL13A1-202ENST00000357811 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.76
COL13A1-202ENST00000357811 SLC52A1Q9NWF4 448 aa26.01■■□□□ 1.76
COL13A1-202ENST00000357811 TMEM57Q8N5G2 664 aa26.01■■□□□ 1.75
COL13A1-202ENST00000357811 ARXQ96QS3 562 aa26■■□□□ 1.75
COL13A1-202ENST00000357811 HDGFL2Q7Z4V5 671 aaPredicted RBP26■■□□□ 1.75
COL13A1-202ENST00000357811 NSD2O96028 1365 aa25.99■■□□□ 1.75
COL13A1-202ENST00000357811 BECN1Q14457 450 aa25.99■■□□□ 1.75
COL13A1-202ENST00000357811 ATF7IPQ6VMQ6 1270 aa25.99■■□□□ 1.75
COL13A1-202ENST00000357811 PRKAR2BP31323 418 aa25.98■■□□□ 1.75
COL13A1-202ENST00000357811 ZRANB1Q9UGI0 708 aa25.96■■□□□ 1.75
COL13A1-202ENST00000357811 PUS7Q96PZ0 661 aaKnown RBP25.95■■□□□ 1.74
COL13A1-202ENST00000357811 TBC1D2Q9BYX2 928 aa25.95■■□□□ 1.74
COL13A1-202ENST00000357811 TBC1D32Q96NH3 1257 aa25.95■■□□□ 1.74
COL13A1-202ENST00000357811 YTHDC2Q9H6S0 1430 aaKnown RBP25.94■■□□□ 1.74
COL13A1-202ENST00000357811 NCKAP5LQ9HCH0 1330 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 PIK3C2BO00750 1634 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 PHACTR3Q96KR7 559 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 C1orf115Q9H7X2 142 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 DIP2CQ9Y2E4 1556 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 MYO5BQ9ULV0 1848 aa25.94■■□□□ 1.74
COL13A1-202ENST00000357811 EMILIN1Q9Y6C2 1016 aa25.93■■□□□ 1.74
COL13A1-202ENST00000357811 LNPKQ9C0E8 428 aa25.92■■□□□ 1.74
COL13A1-202ENST00000357811 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
COL13A1-202ENST00000357811 DDX19BQ9UMR2 479 aa25.92■■□□□ 1.74
COL13A1-202ENST00000357811 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
COL13A1-202ENST00000357811 PTPRMP28827 1452 aa25.91■■□□□ 1.74
COL13A1-202ENST00000357811 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
COL13A1-202ENST00000357811 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
COL13A1-202ENST00000357811 CFAP74Q9C0B2 1584 aa25.9■■□□□ 1.74
COL13A1-202ENST00000357811 CD163L1Q9NR16 1453 aa25.9■■□□□ 1.74
COL13A1-202ENST00000357811 AAMPQ13685 434 aa25.89■■□□□ 1.73
COL13A1-202ENST00000357811 TSPYL6Q8N831 410 aa25.88■■□□□ 1.73
COL13A1-202ENST00000357811 NME9Q86XW9 330 aa25.88■■□□□ 1.73
COL13A1-202ENST00000357811 FAM69CQ0P6D2 419 aa25.86■■□□□ 1.73
COL13A1-202ENST00000357811 RRS1Q15050 365 aaKnown RBP25.86■■□□□ 1.73
COL13A1-202ENST00000357811 C22orf23Q9BZE7 217 aa25.86■■□□□ 1.73
COL13A1-202ENST00000357811 COL3A1P02461 1466 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-202ENST00000357811 NEO1Q92859 1461 aa25.85■■□□□ 1.73
COL13A1-202ENST00000357811 TXNDC2Q86VQ3 553 aa25.85■■□□□ 1.73
COL13A1-202ENST00000357811 ZBTB40Q9NUA8 1239 aa25.85■■□□□ 1.73
COL13A1-202ENST00000357811 NUTM2FA1L443 756 aa25.84■■□□□ 1.73
COL13A1-202ENST00000357811 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
COL13A1-202ENST00000357811 RSPH6AQ9H0K4 717 aa25.84■■□□□ 1.73
COL13A1-202ENST00000357811 CT47B1P0C2W7 299 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-202ENST00000357811 DCTN1Q14203 1278 aa25.83■■□□□ 1.73
COL13A1-202ENST00000357811 FAM83GA6ND36 823 aa25.83■■□□□ 1.73
COL13A1-202ENST00000357811 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.72
COL13A1-202ENST00000357811 IPO8O15397 1037 aaKnown RBP25.82■■□□□ 1.72
COL13A1-202ENST00000357811 FCHSD2O94868 740 aa25.82■■□□□ 1.72
COL13A1-202ENST00000357811 HDAC1Q13547 482 aaPredicted RBP25.82■■□□□ 1.72
COL13A1-202ENST00000357811 GZF1Q9H116 711 aaPredicted RBP25.82■■□□□ 1.72
COL13A1-202ENST00000357811 ANTXR1Q9H6X2 564 aa25.82■■□□□ 1.72
COL13A1-202ENST00000357811 VIRMAQ69YN4 1812 aaKnown RBP25.82■■□□□ 1.72
COL13A1-202ENST00000357811 SOX12O15370 315 aa25.8■■□□□ 1.72
COL13A1-202ENST00000357811 KIF16BQ96L93 1317 aa25.8■■□□□ 1.72
COL13A1-202ENST00000357811 ANKRD45Q5TZF3 282 aa25.79■■□□□ 1.72
COL13A1-202ENST00000357811 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
COL13A1-202ENST00000357811 SMC5Q8IY18 1101 aa25.78■■□□□ 1.72
COL13A1-202ENST00000357811 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
COL13A1-202ENST00000357811 EIF5BO60841 1220 aaKnown RBP25.77■■□□□ 1.72
COL13A1-202ENST00000357811 PNNQ9H307 717 aaKnown RBP25.77■■□□□ 1.72
COL13A1-202ENST00000357811 IL16Q14005 1332 aa25.77■■□□□ 1.72
COL13A1-202ENST00000357811 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
COL13A1-202ENST00000357811 NFE2L2Q16236 605 aa25.75■■□□□ 1.71
COL13A1-202ENST00000357811 NCBP3Q53F19 620 aaKnown RBP25.75■■□□□ 1.71
COL13A1-202ENST00000357811 MBIPQ9NS73 344 aa25.75■■□□□ 1.71
COL13A1-202ENST00000357811 ARHGEF40Q8TER5 1519 aa25.74■■□□□ 1.71
COL13A1-202ENST00000357811 LRRC7Q96NW7 1537 aa25.74■■□□□ 1.71
COL13A1-202ENST00000357811 VAMP4O75379 141 aa25.74■■□□□ 1.71
COL13A1-202ENST00000357811 PNPLA6Q8IY17 1366 aa25.74■■□□□ 1.71
COL13A1-202ENST00000357811 PREX1Q8TCU6 1659 aa25.74■■□□□ 1.71
COL13A1-202ENST00000357811 CHD1LQ86WJ1 897 aa25.73■■□□□ 1.71
COL13A1-202ENST00000357811 RICTORQ6R327 1708 aa25.73■■□□□ 1.71
COL13A1-202ENST00000357811 C8orf58Q8NAV2 365 aa25.73■■□□□ 1.71
COL13A1-202ENST00000357811 FOXD4L1Q9NU39 408 aa25.73■■□□□ 1.71
COL13A1-202ENST00000357811 NUCB1Q02818 461 aa25.71■■□□□ 1.71
COL13A1-202ENST00000357811 KRT24Q2M2I5 525 aa25.71■■□□□ 1.71
COL13A1-202ENST00000357811 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
COL13A1-202ENST00000357811 IL13P35225 146 aa25.7■■□□□ 1.7
COL13A1-202ENST00000357811 WASLO00401 505 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-202ENST00000357811 ZBTB7BO15156 539 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-202ENST00000357811 TWISTNBQ3B726 338 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-202ENST00000357811 ALDH1L2Q3SY69 923 aa25.69■■□□□ 1.7
COL13A1-202ENST00000357811 MRPL50Q8N5N7 158 aaKnown RBP25.69■■□□□ 1.7
COL13A1-202ENST00000357811 NUDT16Q96DE0 195 aaKnown RBP25.69■■□□□ 1.7
COL13A1-202ENST00000357811 AEBP1Q8IUX7 1158 aa25.69■■□□□ 1.7
COL13A1-202ENST00000357811 COG3Q96JB2 828 aa25.68■■□□□ 1.7
COL13A1-202ENST00000357811 PPIP5K1Q6PFW1 1433 aa25.68■■□□□ 1.7
COL13A1-202ENST00000357811 METP08581 1390 aa25.68■■□□□ 1.7
COL13A1-202ENST00000357811 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms