RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 IL16Q14005 1332 aa29.81■■■□□ 2.36
NPAS3-203ENST00000357798 CD109Q6YHK3 1445 aa29.8■■■□□ 2.36
NPAS3-203ENST00000357798 NAP1L5Q96NT1 182 aaPredicted RBP29.79■■■□□ 2.36
NPAS3-203ENST00000357798 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
NPAS3-203ENST00000357798 ARHGEF28Q8N1W1 1705 aaKnown RBP29.78■■■□□ 2.36
NPAS3-203ENST00000357798 GLI2P10070 1586 aa29.77■■■□□ 2.36
NPAS3-203ENST00000357798 PLEKHF1Q96S99 279 aa29.77■■■□□ 2.36
NPAS3-203ENST00000357798 KIDINS220Q9ULH0 1771 aa29.77■■■□□ 2.36
NPAS3-203ENST00000357798 ZBTB40Q9NUA8 1239 aa29.77■■■□□ 2.36
NPAS3-203ENST00000357798 EVC2Q86UK5 1308 aa29.76■■■□□ 2.36
NPAS3-203ENST00000357798 TMPOP42166 694 aaKnown RBP29.76■■■□□ 2.35
NPAS3-203ENST00000357798 COL3A1P02461 1466 aaPredicted RBP29.76■■■□□ 2.35
NPAS3-203ENST00000357798 NUCB1Q02818 461 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 RPGRIP1LQ68CZ1 1315 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 KIF16BQ96L93 1317 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 TRIM35Q9UPQ4 493 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 CFAP74Q9C0B2 1584 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 PTMSP20962 102 aa29.75■■■□□ 2.35
NPAS3-203ENST00000357798 NOB1Q9ULX3 412 aaKnown RBP29.75■■■□□ 2.35
NPAS3-203ENST00000357798 TMEM57Q8N5G2 664 aa29.74■■■□□ 2.35
NPAS3-203ENST00000357798 CHGAP10645 457 aaKnown RBP29.73■■■□□ 2.35
NPAS3-203ENST00000357798 GBP4Q96PP9 640 aa29.73■■■□□ 2.35
NPAS3-203ENST00000357798 IPO8O15397 1037 aaKnown RBP29.72■■■□□ 2.35
NPAS3-203ENST00000357798 SKOR2Q2VWA4 1001 aaPredicted RBP29.71■■■□□ 2.35
NPAS3-203ENST00000357798 TNPO1Q92973 898 aaKnown RBP29.71■■■□□ 2.35
NPAS3-203ENST00000357798 TMEM132EQ6IEE7 984 aa29.71■■■□□ 2.35
NPAS3-203ENST00000357798 ANKRD26Q9UPS8 1709 aa29.7■■■□□ 2.35
NPAS3-203ENST00000357798 RAB3GAP1Q15042 981 aa29.7■■■□□ 2.34
NPAS3-203ENST00000357798 ESPNB1AK53 854 aa29.69■■■□□ 2.34
NPAS3-203ENST00000357798 HSP90AB1P08238 724 aaKnown RBP29.68■■■□□ 2.34
NPAS3-203ENST00000357798 NPATQ14207 1427 aa29.68■■■□□ 2.34
NPAS3-203ENST00000357798 BMP2KLQ5H9B9 411 aa29.68■■■□□ 2.34
NPAS3-203ENST00000357798 ALDH1L2Q3SY69 923 aa29.67■■■□□ 2.34
NPAS3-203ENST00000357798 CHD1LQ86WJ1 897 aa29.67■■■□□ 2.34
NPAS3-203ENST00000357798 GLIPR1L2Q4G1C9 344 aa29.66■■■□□ 2.34
NPAS3-203ENST00000357798 MED14O60244 1454 aa29.66■■■□□ 2.34
NPAS3-203ENST00000357798 U2SURPO15042 1029 aaKnown RBP29.65■■■□□ 2.34
NPAS3-203ENST00000357798 HSP90AA1P07900 732 aaKnown RBP29.65■■■□□ 2.34
NPAS3-203ENST00000357798 LNPKQ9C0E8 428 aa29.64■■■□□ 2.34
NPAS3-203ENST00000357798 RRP9O43818 475 aaKnown RBP29.62■■■□□ 2.33
NPAS3-203ENST00000357798 KIF2CQ99661 725 aa29.62■■■□□ 2.33
NPAS3-203ENST00000357798 CFAP65Q6ZU64 1925 aaKnown RBP29.62■■■□□ 2.33
NPAS3-203ENST00000357798 A0A1W2PP64 1363 aa29.61■■■□□ 2.33
NPAS3-203ENST00000357798 REREQ9P2R6 1566 aa29.61■■■□□ 2.33
NPAS3-203ENST00000357798 ERBB4Q15303 1308 aa29.61■■■□□ 2.33
NPAS3-203ENST00000357798 TRIM44Q96DX7 344 aaPredicted RBP29.61■■■□□ 2.33
NPAS3-203ENST00000357798 HECW2Q9P2P5 1572 aa29.61■■■□□ 2.33
NPAS3-203ENST00000357798 CAMSAP1Q5T5Y3 1602 aa29.6■■■□□ 2.33
NPAS3-203ENST00000357798 BRPF1P55201 1214 aaPredicted RBP29.6■■■□□ 2.33
NPAS3-203ENST00000357798 GAS2L3Q86XJ1 694 aa29.6■■■□□ 2.33
NPAS3-203ENST00000357798 RIPK4P57078 832 aa29.59■■■□□ 2.33
NPAS3-203ENST00000357798 ZNF428Q96B54 188 aa29.59■■■□□ 2.33
NPAS3-203ENST00000357798 GCC1Q96CN9 775 aa29.58■■■□□ 2.33
NPAS3-203ENST00000357798 PIK3C2BO00750 1634 aa29.58■■■□□ 2.33
NPAS3-203ENST00000357798 CABP2Q9NPB3 220 aa29.58■■■□□ 2.33
NPAS3-203ENST00000357798 CHMP4BQ9H444 224 aaKnown RBP29.58■■■□□ 2.33
NPAS3-203ENST00000357798 K7ELQ4 463 aaPredicted RBP29.57■■■□□ 2.32
NPAS3-203ENST00000357798 NEXMIFQ5QGS0 1516 aa29.56■■■□□ 2.32
NPAS3-203ENST00000357798 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
NPAS3-203ENST00000357798 HSP90AA2PQ14568 343 aaPredicted RBP29.56■■■□□ 2.32
NPAS3-203ENST00000357798 PPIP5K1Q6PFW1 1433 aa29.55■■■□□ 2.32
NPAS3-203ENST00000357798 CLEC17AQ6ZS10 378 aa29.54■■■□□ 2.32
NPAS3-203ENST00000357798 PIK3R4Q99570 1358 aa29.54■■■□□ 2.32
NPAS3-203ENST00000357798 GGNBP2Q9H3C7 697 aa29.53■■■□□ 2.32
NPAS3-203ENST00000357798 IBTKQ9P2D0 1353 aaPredicted RBP29.53■■■□□ 2.32
NPAS3-203ENST00000357798 FRMPD1Q5SYB0 1578 aa29.53■■■□□ 2.32
NPAS3-203ENST00000357798 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
NPAS3-203ENST00000357798 VGFO15240 615 aaPredicted RBP29.52■■■□□ 2.32
NPAS3-203ENST00000357798 ABCC3O15438 1527 aa29.52■■■□□ 2.32
NPAS3-203ENST00000357798 PTCH1Q13635 1447 aa29.51■■■□□ 2.32
NPAS3-203ENST00000357798 DIAPH1O60610 1272 aaKnown RBP29.51■■■□□ 2.31
NPAS3-203ENST00000357798 CD2BP2O95400 341 aaKnown RBP29.51■■■□□ 2.31
NPAS3-203ENST00000357798 CCDC173Q0VFZ6 552 aa29.51■■■□□ 2.31
NPAS3-203ENST00000357798 ANKRD45Q5TZF3 282 aa29.51■■■□□ 2.31
NPAS3-203ENST00000357798 TBC1D9Q6ZT07 1266 aa29.51■■■□□ 2.31
NPAS3-203ENST00000357798 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
NPAS3-203ENST00000357798 CLTCQ00610 1675 aaKnown RBP29.5■■■□□ 2.31
NPAS3-203ENST00000357798 GOLGA6L22H0YM25 854 aa29.5■■■□□ 2.31
NPAS3-203ENST00000357798 ZBTB7BO15156 539 aaPredicted RBP29.5■■■□□ 2.31
NPAS3-203ENST00000357798 ARHGAP45Q92619 1136 aa29.49■■■□□ 2.31
NPAS3-203ENST00000357798 ZFYVE9O95405 1425 aa29.49■■■□□ 2.31
NPAS3-203ENST00000357798 ATAD2Q6PL18 1390 aa29.49■■■□□ 2.31
NPAS3-203ENST00000357798 LRRC7Q96NW7 1537 aa29.49■■■□□ 2.31
NPAS3-203ENST00000357798 PPP1R9BQ96SB3 815 aa29.49■■■□□ 2.31
NPAS3-203ENST00000357798 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
NPAS3-203ENST00000357798 FYB1O15117 783 aa29.47■■■□□ 2.31
NPAS3-203ENST00000357798 TPM2P07951 284 aa29.47■■■□□ 2.31
NPAS3-203ENST00000357798 TERF2IPQ9NYB0 399 aa29.47■■■□□ 2.31
NPAS3-203ENST00000357798 KIF20BQ96Q89 1820 aa29.46■■■□□ 2.31
NPAS3-203ENST00000357798 CD163L1Q9NR16 1453 aa29.46■■■□□ 2.31
NPAS3-203ENST00000357798 FCHSD2O94868 740 aa29.45■■■□□ 2.31
NPAS3-203ENST00000357798 SSFA2P28290 1259 aa29.45■■■□□ 2.31
NPAS3-203ENST00000357798 KLHL40Q2TBA0 621 aa29.45■■■□□ 2.31
NPAS3-203ENST00000357798 FAM135BQ49AJ0 1406 aa29.45■■■□□ 2.3
NPAS3-203ENST00000357798 SRPK2P78362 688 aaKnown RBP29.44■■■□□ 2.3
NPAS3-203ENST00000357798 GAS2L2Q8NHY3 880 aa29.44■■■□□ 2.3
NPAS3-203ENST00000357798 CDC45O75419 566 aa29.44■■■□□ 2.3
NPAS3-203ENST00000357798 MLH3Q9UHC1 1453 aa29.43■■■□□ 2.3
NPAS3-203ENST00000357798 MRPL50Q8N5N7 158 aaKnown RBP29.43■■■□□ 2.3
NPAS3-203ENST00000357798 FOXD4L1Q9NU39 408 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms