RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-201ENST00000357235 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-201ENST00000357235 FAM13BQ9NYF5 915 aa10.26□□□□□ -0.77
CDC42SE1-201ENST00000357235 EVC2Q86UK5 1308 aa10.26□□□□□ -0.77
CDC42SE1-201ENST00000357235 CCDC27Q2M243 656 aa10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 TNPO1Q92973 898 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 ASXL2Q76L83 1435 aa10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 UHRF1BP1LA0JNW5 1464 aa10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 SPHKAPQ2M3C7 1700 aa10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 THUMPD2Q9BTF0 503 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 MINK1Q8N4C8 1332 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-201ENST00000357235 ABCC1P33527 1531 aa10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 C14orf93Q9H972 538 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 CHD1LQ86WJ1 897 aa10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
CDC42SE1-201ENST00000357235 CEP152O94986 1710 aa10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 APBB1O00213 710 aa10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 HMOX1P09601 288 aa10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 SMC5Q8IY18 1101 aa10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 ZBTB40Q9NUA8 1239 aa10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-201ENST00000357235 ZNF518AQ6AHZ1 1483 aa10.22□□□□□ -0.77
CDC42SE1-201ENST00000357235 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
CDC42SE1-201ENST00000357235 FANCAO15360 1455 aa10.22□□□□□ -0.77
CDC42SE1-201ENST00000357235 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-201ENST00000357235 GAS2L3Q86XJ1 694 aa10.22□□□□□ -0.77
CDC42SE1-201ENST00000357235 TERF1P54274 439 aa10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 NUCB1Q02818 461 aa10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 MTERF4Q7Z6M4 381 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 PRDM10Q9NQV6 1147 aa10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 KIF16BQ96L93 1317 aa10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 ZFYVE16Q7Z3T8 1539 aa10.21□□□□□ -0.77
CDC42SE1-201ENST00000357235 MAP3K4Q9Y6R4 1608 aa10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 IQSEC2Q5JU85 1478 aa10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 RTEL1-TNFRSF6BF6WH68 1400 aa10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-201ENST00000357235 OFD1O75665 1012 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 PRKAR2BP31323 418 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 ARID3AQ99856 593 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 ADGRL1O94910 1474 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 CT47B1P0C2W7 299 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 SSFA2P28290 1259 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 IPO4Q8TEX9 1081 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 PLEKHF1Q96S99 279 aa10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 VIRMAQ69YN4 1812 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 AEBP2Q6ZN18 517 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 ANP32BQ92688 251 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-201ENST00000357235 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 ATP7AQ04656 1500 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 CD109Q6YHK3 1445 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 ANKRD36BQ8N2N9 1353 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 FYB1O15117 783 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 DMTNQ08495 405 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 A0A1W2PP64 1363 aa10.19□□□□□ -0.78
CDC42SE1-201ENST00000357235 MYOM2P54296 1465 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 RBM25P49756 843 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 TSPYL6Q8N831 410 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 TERF2IPQ9NYB0 399 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 K7ELQ4 463 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 PRAM1Q96QH2 718 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZMYM3Q14202 1370 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 TET3O43151 1660 aa10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZCCHC11Q5TAX3 1644 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-201ENST00000357235 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 FOXD4L4Q8WXT5 416 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 BMP2KLQ5H9B9 411 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 SHPRHQ149N8 1683 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 RAB3GAP1Q15042 981 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 PAXIP1Q6ZW49 1069 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZSCAN30Q86W11 494 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 CABP1Q9NZU7 370 aa10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 R3HCC1Q9Y3T6 440 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-201ENST00000357235 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
CDC42SE1-201ENST00000357235 SNX21Q969T3 373 aa10.16□□□□□ -0.78
CDC42SE1-201ENST00000357235 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
CDC42SE1-201ENST00000357235 ATAD2Q6PL18 1390 aa10.16□□□□□ -0.78
CDC42SE1-201ENST00000357235 HDGFL2Q7Z4V5 671 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-201ENST00000357235 ABCC11Q96J66 1382 aa10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZBTB7BO15156 539 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 KIF2CQ99661 725 aa10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms