RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 TMEM131LA2VDJ0 1609 aa22.62■■□□□ 1.21
GYPC-202ENST00000356887 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
GYPC-202ENST00000356887 SEC24BO95487 1268 aa22.62■■□□□ 1.21
GYPC-202ENST00000356887 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
GYPC-202ENST00000356887 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
GYPC-202ENST00000356887 RWDD1Q9H446 243 aaPredicted RBP22.61■■□□□ 1.21
GYPC-202ENST00000356887 MED14O60244 1454 aa22.61■■□□□ 1.21
GYPC-202ENST00000356887 TMPOP42166 694 aaKnown RBP22.59■■□□□ 1.21
GYPC-202ENST00000356887 MVPQ14764 893 aaKnown RBP22.59■■□□□ 1.21
GYPC-202ENST00000356887 ZKSCAN2Q63HK3 967 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 PDZRN3Q9UPQ7 1066 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 ANKRD26Q9UPS8 1709 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 CD163L1Q9NR16 1453 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 FYB1O15117 783 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 TERF2IPQ9NYB0 399 aa22.59■■□□□ 1.21
GYPC-202ENST00000356887 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.21
GYPC-202ENST00000356887 U2SURPO15042 1029 aaKnown RBP22.58■■□□□ 1.2
GYPC-202ENST00000356887 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
GYPC-202ENST00000356887 NLRP1Q9C000 1473 aa22.57■■□□□ 1.2
GYPC-202ENST00000356887 EIF5BO60841 1220 aaKnown RBP22.57■■□□□ 1.2
GYPC-202ENST00000356887 FBXO31Q5XUX0 539 aaPredicted RBP22.57■■□□□ 1.2
GYPC-202ENST00000356887 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
GYPC-202ENST00000356887 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
GYPC-202ENST00000356887 DZIP1LQ8IYY4 767 aaKnown RBP22.56■■□□□ 1.2
GYPC-202ENST00000356887 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
GYPC-202ENST00000356887 IL16Q14005 1332 aa22.56■■□□□ 1.2
GYPC-202ENST00000356887 GSE1Q14687 1217 aa22.56■■□□□ 1.2
GYPC-202ENST00000356887 ESF1Q9H501 851 aaKnown RBP22.56■■□□□ 1.2
GYPC-202ENST00000356887 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
GYPC-202ENST00000356887 POGKQ9P215 609 aa22.55■■□□□ 1.2
GYPC-202ENST00000356887 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
GYPC-202ENST00000356887 SPATA31D1Q6ZQQ2 1576 aa22.53■■□□□ 1.2
GYPC-202ENST00000356887 FTSJ3Q8IY81 847 aaKnown RBP22.53■■□□□ 1.2
GYPC-202ENST00000356887 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
GYPC-202ENST00000356887 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
GYPC-202ENST00000356887 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
GYPC-202ENST00000356887 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
GYPC-202ENST00000356887 HDGFL2Q7Z4V5 671 aaPredicted RBP22.51■■□□□ 1.19
GYPC-202ENST00000356887 SSH1Q8WYL5 1049 aa22.51■■□□□ 1.19
GYPC-202ENST00000356887 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
GYPC-202ENST00000356887 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
GYPC-202ENST00000356887 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
GYPC-202ENST00000356887 BECN1Q14457 450 aa22.5■■□□□ 1.19
GYPC-202ENST00000356887 TRIM27P14373 513 aa22.49■■□□□ 1.19
GYPC-202ENST00000356887 PNNQ9H307 717 aaKnown RBP22.49■■□□□ 1.19
GYPC-202ENST00000356887 RIPK4P57078 832 aa22.48■■□□□ 1.19
GYPC-202ENST00000356887 TBC1D32Q96NH3 1257 aa22.48■■□□□ 1.19
GYPC-202ENST00000356887 HDAC1Q13547 482 aaPredicted RBP22.47■■□□□ 1.19
GYPC-202ENST00000356887 ATF7IPQ6VMQ6 1270 aa22.47■■□□□ 1.19
GYPC-202ENST00000356887 CABP1Q9NZU7 370 aa22.46■■□□□ 1.19
GYPC-202ENST00000356887 DDX19BQ9UMR2 479 aa22.46■■□□□ 1.19
GYPC-202ENST00000356887 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
GYPC-202ENST00000356887 UPF2Q9HAU5 1272 aaKnown RBP22.46■■□□□ 1.19
GYPC-202ENST00000356887 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
GYPC-202ENST00000356887 CDC42BPGQ6DT37 1551 aa22.44■■□□□ 1.18
GYPC-202ENST00000356887 C3P01024 1663 aa22.44■■□□□ 1.18
GYPC-202ENST00000356887 FCHSD2O94868 740 aa22.43■■□□□ 1.18
GYPC-202ENST00000356887 IL27Q8NEV9 243 aa22.43■■□□□ 1.18
GYPC-202ENST00000356887 ITPRIPQ8IWB1 547 aa22.42■■□□□ 1.18
GYPC-202ENST00000356887 DLC1Q96QB1 1528 aa22.41■■□□□ 1.18
GYPC-202ENST00000356887 TMEM57Q8N5G2 664 aa22.4■■□□□ 1.18
GYPC-202ENST00000356887 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
GYPC-202ENST00000356887 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
GYPC-202ENST00000356887 ALDH1L2Q3SY69 923 aa22.4■■□□□ 1.18
GYPC-202ENST00000356887 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
GYPC-202ENST00000356887 SMC5Q8IY18 1101 aa22.39■■□□□ 1.17
GYPC-202ENST00000356887 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
GYPC-202ENST00000356887 ZBTB40Q9NUA8 1239 aa22.39■■□□□ 1.17
GYPC-202ENST00000356887 POLKQ9UBT6 870 aa22.39■■□□□ 1.17
GYPC-202ENST00000356887 LRRC7Q96NW7 1537 aa22.39■■□□□ 1.17
GYPC-202ENST00000356887 ANTXR1Q9H6X2 564 aa22.38■■□□□ 1.17
GYPC-202ENST00000356887 ATP7BP35670 1465 aa22.38■■□□□ 1.17
GYPC-202ENST00000356887 FAM135BQ49AJ0 1406 aa22.38■■□□□ 1.17
GYPC-202ENST00000356887 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
GYPC-202ENST00000356887 TNRQ92752 1358 aa22.37■■□□□ 1.17
GYPC-202ENST00000356887 RIMS1Q86UR5 1692 aaKnown RBP22.37■■□□□ 1.17
GYPC-202ENST00000356887 TBC1D2Q9BYX2 928 aa22.37■■□□□ 1.17
GYPC-202ENST00000356887 PRKAR2BP31323 418 aa22.36■■□□□ 1.17
GYPC-202ENST00000356887 WAPLQ7Z5K2 1190 aa22.36■■□□□ 1.17
GYPC-202ENST00000356887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
GYPC-202ENST00000356887 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
GYPC-202ENST00000356887 BRPF1P55201 1214 aaPredicted RBP22.35■■□□□ 1.17
GYPC-202ENST00000356887 PPIP5K1Q6PFW1 1433 aa22.35■■□□□ 1.17
GYPC-202ENST00000356887 SLKQ9H2G2 1235 aaPredicted RBP22.35■■□□□ 1.17
GYPC-202ENST00000356887 ADAMTSL3P82987 1691 aa22.35■■□□□ 1.17
GYPC-202ENST00000356887 FBLN1P23142 703 aa22.34■■□□□ 1.17
GYPC-202ENST00000356887 ZNF428Q96B54 188 aa22.34■■□□□ 1.17
GYPC-202ENST00000356887 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
GYPC-202ENST00000356887 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
GYPC-202ENST00000356887 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
GYPC-202ENST00000356887 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.16
GYPC-202ENST00000356887 PHACTR3Q96KR7 559 aa22.32■■□□□ 1.16
GYPC-202ENST00000356887 MAP2P11137 1827 aaKnown RBP22.31■■□□□ 1.16
GYPC-202ENST00000356887 C22orf23Q9BZE7 217 aa22.31■■□□□ 1.16
GYPC-202ENST00000356887 BRPF3Q9ULD4 1205 aa22.31■■□□□ 1.16
GYPC-202ENST00000356887 CPSF1Q10570 1443 aaKnown RBP22.3■■□□□ 1.16
GYPC-202ENST00000356887 UBR1Q8IWV7 1749 aa22.3■■□□□ 1.16
GYPC-202ENST00000356887 NUCB1Q02818 461 aa22.3■■□□□ 1.16
GYPC-202ENST00000356887 VAMP4O75379 141 aa22.29■■□□□ 1.16
GYPC-202ENST00000356887 IL13P35225 146 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms