RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NEO1Q92859 1461 aa24.97■■□□□ 1.59
COL13A1-201ENST00000354547 HDGFL2Q7Z4V5 671 aaPredicted RBP24.97■■□□□ 1.59
COL13A1-201ENST00000354547 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
COL13A1-201ENST00000354547 IL27Q8NEV9 243 aa24.96■■□□□ 1.59
COL13A1-201ENST00000354547 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 SLKQ9H2G2 1235 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 MYO5BQ9ULV0 1848 aa24.95■■□□□ 1.58
COL13A1-201ENST00000354547 TRIM27P14373 513 aa24.95■■□□□ 1.58
COL13A1-201ENST00000354547 USP32Q8NFA0 1604 aa24.94■■□□□ 1.58
COL13A1-201ENST00000354547 NOB1Q9ULX3 412 aaKnown RBP24.94■■□□□ 1.58
COL13A1-201ENST00000354547 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
COL13A1-201ENST00000354547 ATAD2Q6PL18 1390 aa24.92■■□□□ 1.58
COL13A1-201ENST00000354547 GSE1Q14687 1217 aa24.92■■□□□ 1.58
COL13A1-201ENST00000354547 HMOX1P09601 288 aa24.91■■□□□ 1.58
COL13A1-201ENST00000354547 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
COL13A1-201ENST00000354547 UPF2Q9HAU5 1272 aaKnown RBP24.9■■□□□ 1.58
COL13A1-201ENST00000354547 PTPRMP28827 1452 aa24.9■■□□□ 1.58
COL13A1-201ENST00000354547 SPRYD3Q8NCJ5 442 aa24.89■■□□□ 1.57
COL13A1-201ENST00000354547 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 THUMPD2Q9BTF0 503 aaKnown RBP24.88■■□□□ 1.57
COL13A1-201ENST00000354547 PRKAR2BP31323 418 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 AAMPQ13685 434 aa24.87■■□□□ 1.57
COL13A1-201ENST00000354547 TMEM57Q8N5G2 664 aa24.87■■□□□ 1.57
COL13A1-201ENST00000354547 BECN1Q14457 450 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
COL13A1-201ENST00000354547 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 RICTORQ6R327 1708 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.56
COL13A1-201ENST00000354547 MFAP1P55081 439 aaKnown RBP24.83■■□□□ 1.56
COL13A1-201ENST00000354547 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 POLKQ9UBT6 870 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 EMILIN1Q9Y6C2 1016 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 ADGRB2O60241 1585 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 COL3A1P02461 1466 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-201ENST00000354547 CT47B1P0C2W7 299 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-201ENST00000354547 BRPF3Q9ULD4 1205 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 PREX1Q8TCU6 1659 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 NCBP3Q53F19 620 aaKnown RBP24.79■■□□□ 1.56
COL13A1-201ENST00000354547 TBC1D32Q96NH3 1257 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 NME9Q86XW9 330 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 NLRP1Q9C000 1473 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
COL13A1-201ENST00000354547 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 FCHSD2O94868 740 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 TXNDC2Q86VQ3 553 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
COL13A1-201ENST00000354547 VIRMAQ69YN4 1812 aaKnown RBP24.76■■□□□ 1.55
COL13A1-201ENST00000354547 IPO8O15397 1037 aaKnown RBP24.76■■□□□ 1.55
COL13A1-201ENST00000354547 TBC1D2Q9BYX2 928 aa24.76■■□□□ 1.55
COL13A1-201ENST00000354547 LNPKQ9C0E8 428 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 IL16Q14005 1332 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 RRS1Q15050 365 aaKnown RBP24.75■■□□□ 1.55
COL13A1-201ENST00000354547 ARHGEF40Q8TER5 1519 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 TSPYL6Q8N831 410 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 ZBTB40Q9NUA8 1239 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 KIF16BQ96L93 1317 aa24.73■■□□□ 1.55
COL13A1-201ENST00000354547 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-201ENST00000354547 PNPLA6Q8IY17 1366 aa24.72■■□□□ 1.55
COL13A1-201ENST00000354547 NUTM2FA1L443 756 aa24.71■■□□□ 1.55
COL13A1-201ENST00000354547 C22orf23Q9BZE7 217 aa24.71■■□□□ 1.55
COL13A1-201ENST00000354547 TSPOAP1O95153 1857 aa24.7■■□□□ 1.54
COL13A1-201ENST00000354547 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
COL13A1-201ENST00000354547 FAM83GA6ND36 823 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 LRRC7Q96NW7 1537 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 DCTN1Q14203 1278 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
COL13A1-201ENST00000354547 SMC5Q8IY18 1101 aa24.68■■□□□ 1.54
COL13A1-201ENST00000354547 ARXQ96QS3 562 aa24.67■■□□□ 1.54
COL13A1-201ENST00000354547 MED14O60244 1454 aa24.67■■□□□ 1.54
COL13A1-201ENST00000354547 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
COL13A1-201ENST00000354547 NUDT16Q96DE0 195 aaKnown RBP24.66■■□□□ 1.54
COL13A1-201ENST00000354547 ALDH1L2Q3SY69 923 aa24.66■■□□□ 1.54
COL13A1-201ENST00000354547 VAMP4O75379 141 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 PPIP5K1Q6PFW1 1433 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 SOX12O15370 315 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 COG3Q96JB2 828 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 METP08581 1390 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 IL13P35225 146 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 ANTXR1Q9H6X2 564 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
COL13A1-201ENST00000354547 ANKRD26Q9UPS8 1709 aa24.63■■□□□ 1.53
COL13A1-201ENST00000354547 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
COL13A1-201ENST00000354547 NUCB1Q02818 461 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 CHD1LQ86WJ1 897 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 MRPL50Q8N5N7 158 aaKnown RBP24.61■■□□□ 1.53
COL13A1-201ENST00000354547 C8orf58Q8NAV2 365 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 MAP2P11137 1827 aaKnown RBP24.61■■□□□ 1.53
COL13A1-201ENST00000354547 GNAI1P63096 354 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 TWISTNBQ3B726 338 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms