RNA–Protein interactions for RNA: ENST00000354373.2

RFPL1-201, Transcript of ret finger protein like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL1, Length 1,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1-201ENST00000354373 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
RFPL1-201ENST00000354373 PXDNQ92626 1479 aa13.53□□□□□ -0.24
RFPL1-201ENST00000354373 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
RFPL1-201ENST00000354373 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
RFPL1-201ENST00000354373 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
RFPL1-201ENST00000354373 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
RFPL1-201ENST00000354373 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
RFPL1-201ENST00000354373 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
RFPL1-201ENST00000354373 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
RFPL1-201ENST00000354373 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
RFPL1-201ENST00000354373 ACEP12821 1306 aa13.49□□□□□ -0.25
RFPL1-201ENST00000354373 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
RFPL1-201ENST00000354373 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 SPATA31A3Q5VYP0 1347 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 LRP6O75581 1613 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
RFPL1-201ENST00000354373 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
RFPL1-201ENST00000354373 TESK2Q96S53 571 aa13.47□□□□□ -0.25
RFPL1-201ENST00000354373 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
RFPL1-201ENST00000354373 C8orf37Q96NL8 207 aa13.46□□□□□ -0.25
RFPL1-201ENST00000354373 SBNO1A3KN83 1393 aa13.46□□□□□ -0.26
RFPL1-201ENST00000354373 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
RFPL1-201ENST00000354373 TMF1P82094 1093 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 CABLES1Q8TDN4 633 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
RFPL1-201ENST00000354373 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
RFPL1-201ENST00000354373 COL22A1Q8NFW1 1626 aaPredicted RBP13.45□□□□□ -0.26
RFPL1-201ENST00000354373 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
RFPL1-201ENST00000354373 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
RFPL1-201ENST00000354373 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
RFPL1-201ENST00000354373 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
RFPL1-201ENST00000354373 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
RFPL1-201ENST00000354373 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
RFPL1-201ENST00000354373 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
RFPL1-201ENST00000354373 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
RFPL1-201ENST00000354373 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
RFPL1-201ENST00000354373 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
RFPL1-201ENST00000354373 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
RFPL1-201ENST00000354373 USP6P35125 1406 aa13.4□□□□□ -0.26
RFPL1-201ENST00000354373 AFF2P51816 1311 aa13.4□□□□□ -0.26
RFPL1-201ENST00000354373 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
RFPL1-201ENST00000354373 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
RFPL1-201ENST00000354373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFPL1-201ENST00000354373 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
RFPL1-201ENST00000354373 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
RFPL1-201ENST00000354373 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
RFPL1-201ENST00000354373 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
RFPL1-201ENST00000354373 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
RFPL1-201ENST00000354373 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
RFPL1-201ENST00000354373 NLRP6P59044 892 aa13.37□□□□□ -0.27
RFPL1-201ENST00000354373 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
RFPL1-201ENST00000354373 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 SOX12O15370 315 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
RFPL1-201ENST00000354373 POLA2Q14181 598 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 USP21Q9UK80 565 aa13.36□□□□□ -0.27
RFPL1-201ENST00000354373 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
RFPL1-201ENST00000354373 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
RFPL1-201ENST00000354373 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
RFPL1-201ENST00000354373 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
RFPL1-201ENST00000354373 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
RFPL1-201ENST00000354373 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
RFPL1-201ENST00000354373 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.27
RFPL1-201ENST00000354373 SSH2Q76I76 1423 aa13.33□□□□□ -0.27
RFPL1-201ENST00000354373 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.27
RFPL1-201ENST00000354373 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
RFPL1-201ENST00000354373 QTRT2Q9H974 415 aaKnown RBP13.33□□□□□ -0.28
RFPL1-201ENST00000354373 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
RFPL1-201ENST00000354373 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
RFPL1-201ENST00000354373 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
RFPL1-201ENST00000354373 CHRNA2Q15822 529 aa13.32□□□□□ -0.28
RFPL1-201ENST00000354373 NME9Q86XW9 330 aa13.32□□□□□ -0.28
RFPL1-201ENST00000354373 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
RFPL1-201ENST00000354373 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
RFPL1-201ENST00000354373 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
RFPL1-201ENST00000354373 GCP02774 474 aa13.31□□□□□ -0.28
RFPL1-201ENST00000354373 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
RFPL1-201ENST00000354373 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
RFPL1-201ENST00000354373 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
RFPL1-201ENST00000354373 MYOM1P52179 1685 aa13.31□□□□□ -0.28
RFPL1-201ENST00000354373 RXRBP28702 533 aa13.3□□□□□ -0.28
RFPL1-201ENST00000354373 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
RFPL1-201ENST00000354373 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
RFPL1-201ENST00000354373 USP19O94966 1318 aa13.3□□□□□ -0.28
RFPL1-201ENST00000354373 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
RFPL1-201ENST00000354373 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
RFPL1-201ENST00000354373 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
RFPL1-201ENST00000354373 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
RFPL1-201ENST00000354373 PROM2Q8N271 834 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms