RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
NUP50-201ENST00000347635 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.48
NUP50-201ENST00000347635 IGHDP01880 384 aa18.02■□□□□ 0.48
NUP50-201ENST00000347635 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
NUP50-201ENST00000347635 C1orf115Q9H7X2 142 aa18.02■□□□□ 0.48
NUP50-201ENST00000347635 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.47
NUP50-201ENST00000347635 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 C8orf34Q49A92 452 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 GRPEL1Q9HAV7 217 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
NUP50-201ENST00000347635 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 TRAPPC8Q9Y2L5 1435 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 TNRQ92752 1358 aa18.01■□□□□ 0.47
NUP50-201ENST00000347635 FOXD4L6Q3SYB3 417 aaPredicted RBP18.01■□□□□ 0.47
NUP50-201ENST00000347635 FOXD4L3Q6VB84 417 aaPredicted RBP18.01■□□□□ 0.47
NUP50-201ENST00000347635 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
NUP50-201ENST00000347635 RABEP1Q15276 862 aa18■□□□□ 0.47
NUP50-201ENST00000347635 TMX4Q9H1E5 349 aaPredicted RBP18■□□□□ 0.47
NUP50-201ENST00000347635 ATP6V1DQ9Y5K8 247 aa18■□□□□ 0.47
NUP50-201ENST00000347635 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
NUP50-201ENST00000347635 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
NUP50-201ENST00000347635 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
NUP50-201ENST00000347635 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
NUP50-201ENST00000347635 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
NUP50-201ENST00000347635 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
NUP50-201ENST00000347635 TWISTNBQ3B726 338 aaPredicted RBP17.98■□□□□ 0.47
NUP50-201ENST00000347635 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
NUP50-201ENST00000347635 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
NUP50-201ENST00000347635 TESK2Q96S53 571 aa17.98■□□□□ 0.47
NUP50-201ENST00000347635 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
NUP50-201ENST00000347635 ANO2Q9NQ90 1003 aa17.97■□□□□ 0.47
NUP50-201ENST00000347635 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
NUP50-201ENST00000347635 TMEM57Q8N5G2 664 aa17.97■□□□□ 0.47
NUP50-201ENST00000347635 TMPOP42166 694 aaKnown RBP17.97■□□□□ 0.47
NUP50-201ENST00000347635 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
NUP50-201ENST00000347635 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
NUP50-201ENST00000347635 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
NUP50-201ENST00000347635 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
NUP50-201ENST00000347635 KDM6BO15054 1643 aa17.96■□□□□ 0.47
NUP50-201ENST00000347635 CAVIN1Q6NZI2 390 aaKnown RBP17.95■□□□□ 0.46
NUP50-201ENST00000347635 PLEKHH1Q9ULM0 1364 aa17.95■□□□□ 0.46
NUP50-201ENST00000347635 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
NUP50-201ENST00000347635 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
NUP50-201ENST00000347635 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
NUP50-201ENST00000347635 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
NUP50-201ENST00000347635 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
NUP50-201ENST00000347635 NOS1P29475 1434 aa17.94■□□□□ 0.46
NUP50-201ENST00000347635 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
NUP50-201ENST00000347635 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
NUP50-201ENST00000347635 TBC1D32Q96NH3 1257 aa17.94■□□□□ 0.46
NUP50-201ENST00000347635 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
NUP50-201ENST00000347635 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
NUP50-201ENST00000347635 HSP90B1P14625 803 aaKnown RBP17.93■□□□□ 0.46
NUP50-201ENST00000347635 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
NUP50-201ENST00000347635 NEO1Q92859 1461 aa17.93■□□□□ 0.46
NUP50-201ENST00000347635 TPM2P07951 284 aa17.92■□□□□ 0.46
NUP50-201ENST00000347635 SSH1Q8WYL5 1049 aa17.92■□□□□ 0.46
NUP50-201ENST00000347635 FKBP5Q13451 457 aaPredicted RBP17.92■□□□□ 0.46
NUP50-201ENST00000347635 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
NUP50-201ENST00000347635 DIAPH3Q9NSV4 1193 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 FAM13BQ9NYF5 915 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 PIK3C2GO75747 1445 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 FCHSD2O94868 740 aa17.91■□□□□ 0.46
NUP50-201ENST00000347635 PRPF40AO75400 957 aaKnown RBP17.9■□□□□ 0.46
NUP50-201ENST00000347635 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
NUP50-201ENST00000347635 INSRP06213 1382 aa17.9■□□□□ 0.46
NUP50-201ENST00000347635 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
NUP50-201ENST00000347635 GORABQ5T7V8 394 aa17.9■□□□□ 0.46
NUP50-201ENST00000347635 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
NUP50-201ENST00000347635 KCNH5Q8NCM2 988 aa17.9■□□□□ 0.46
NUP50-201ENST00000347635 RUFY2Q8WXA3 655 aa17.9■□□□□ 0.46
NUP50-201ENST00000347635 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 MBD3O95983 291 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
NUP50-201ENST00000347635 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
NUP50-201ENST00000347635 ESPNB1AK53 854 aa17.88■□□□□ 0.45
NUP50-201ENST00000347635 TRIM27P14373 513 aa17.88■□□□□ 0.45
NUP50-201ENST00000347635 R3HCC1Q9Y3T6 440 aaKnown RBP17.88■□□□□ 0.45
NUP50-201ENST00000347635 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
NUP50-201ENST00000347635 ABCA8O94911 1581 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 MCM2P49736 904 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 ATP10AO60312 1499 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 NEK4P51957 841 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 KDM5CP41229 1560 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
NUP50-201ENST00000347635 NSD2O96028 1365 aa17.87■□□□□ 0.45
NUP50-201ENST00000347635 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
NUP50-201ENST00000347635 SMC3Q9UQE7 1217 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
NUP50-201ENST00000347635 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
NUP50-201ENST00000347635 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms