RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MLECQ14165 292 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 PHACTR3Q96KR7 559 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLCN3-201ENST00000347613 ARHGEF40Q8TER5 1519 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 PODXL2Q9NZ53 605 aa7.82□□□□□ -1.16
CLCN3-201ENST00000347613 MAP2P11137 1827 aaKnown RBP7.82□□□□□ -1.16
CLCN3-201ENST00000347613 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
CLCN3-201ENST00000347613 PDE3AQ14432 1141 aa7.82□□□□□ -1.16
CLCN3-201ENST00000347613 CLTCQ00610 1675 aaKnown RBP7.82□□□□□ -1.16
CLCN3-201ENST00000347613 SSH1Q8WYL5 1049 aa7.82□□□□□ -1.16
CLCN3-201ENST00000347613 FAM69CQ0P6D2 419 aa7.81□□□□□ -1.16
CLCN3-201ENST00000347613 WDR63Q8IWG1 891 aa7.81□□□□□ -1.16
CLCN3-201ENST00000347613 IL27Q8NEV9 243 aa7.81□□□□□ -1.16
CLCN3-201ENST00000347613 PDZRN3Q9UPQ7 1066 aa7.81□□□□□ -1.16
CLCN3-201ENST00000347613 NRXN3Q9Y4C0 1643 aa7.81□□□□□ -1.16
CLCN3-201ENST00000347613 TRIM27P14373 513 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-201ENST00000347613 MED14O60244 1454 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 ANKRD26Q9UPS8 1709 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 ZFYVE9O95405 1425 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 METP08581 1390 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 HMOX1P09601 288 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 NFKBIBQ15653 356 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 CCDC27Q2M243 656 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 POLKQ9UBT6 870 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 EMILIN1Q9Y6C2 1016 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-201ENST00000347613 TSPYL6Q8N831 410 aa7.8□□□□□ -1.16
CLCN3-201ENST00000347613 FRAT2O75474 233 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-201ENST00000347613 CANXP27824 592 aaKnown RBP7.79□□□□□ -1.16
CLCN3-201ENST00000347613 NOB1Q9ULX3 412 aaKnown RBP7.79□□□□□ -1.16
CLCN3-201ENST00000347613 NME9Q86XW9 330 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 SLC52A1Q9NWF4 448 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 LRRC7Q96NW7 1537 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 KIF20BQ96Q89 1820 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 A2ML1A8K2U0 1454 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 PNPLA6Q8IY17 1366 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 RIPK4P57078 832 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 POGKQ9P215 609 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 CPS1P31327 1500 aa7.79□□□□□ -1.16
CLCN3-201ENST00000347613 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 FAM83GA6ND36 823 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 MVPQ14764 893 aaKnown RBP7.78□□□□□ -1.16
CLCN3-201ENST00000347613 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 DLG5Q8TDM6 1919 aa7.78□□□□□ -1.16
CLCN3-201ENST00000347613 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
CLCN3-201ENST00000347613 ATAD2Q6PL18 1390 aa7.77□□□□□ -1.17
CLCN3-201ENST00000347613 ELL2O00472 640 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-201ENST00000347613 DCTN1Q14203 1278 aa7.77□□□□□ -1.17
CLCN3-201ENST00000347613 PUS7Q96PZ0 661 aaKnown RBP7.77□□□□□ -1.17
CLCN3-201ENST00000347613 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 PRKAR2BP31323 418 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 CFAP53Q96M91 514 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 C1orf115Q9H7X2 142 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 SMC4Q9NTJ3 1288 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 KRT24Q2M2I5 525 aa7.76□□□□□ -1.17
CLCN3-201ENST00000347613 NSD2O96028 1365 aa7.75□□□□□ -1.17
CLCN3-201ENST00000347613 DIAPH1O60610 1272 aaKnown RBP7.75□□□□□ -1.17
CLCN3-201ENST00000347613 DZIP1LQ8IYY4 767 aaKnown RBP7.75□□□□□ -1.17
CLCN3-201ENST00000347613 SPRYD3Q8NCJ5 442 aa7.75□□□□□ -1.17
CLCN3-201ENST00000347613 IL13P35225 146 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 SIRT2Q8IXJ6 389 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 FAM135BQ49AJ0 1406 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 RIMS2Q9UQ26 1411 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 ZKSCAN2Q63HK3 967 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 AEBP1Q8IUX7 1158 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 ZBTB40Q9NUA8 1239 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 BRPF3Q9ULD4 1205 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 CPSF1Q10570 1443 aaKnown RBP7.74□□□□□ -1.17
CLCN3-201ENST00000347613 ATF7IPQ6VMQ6 1270 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 ITPRIPQ8IWB1 547 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 SLKQ9H2G2 1235 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-201ENST00000347613 ANTXR1Q9H6X2 564 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 SPATA31D1Q6ZQQ2 1576 aa7.74□□□□□ -1.17
CLCN3-201ENST00000347613 RTL5Q5HYW3 569 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-201ENST00000347613 C8orf58Q8NAV2 365 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 MYH16Q9H6N6 1097 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 TERF2IPQ9NYB0 399 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 KNDC1Q76NI1 1749 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-201ENST00000347613 DNAJC5Q9H3Z4 198 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 PPIP5K1Q6PFW1 1433 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 DLC1Q96QB1 1528 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 VAMP4O75379 141 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 TBC1D2Q9BYX2 928 aa7.73□□□□□ -1.17
CLCN3-201ENST00000347613 RIMS1Q86UR5 1692 aaKnown RBP7.72□□□□□ -1.17
CLCN3-201ENST00000347613 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
CLCN3-201ENST00000347613 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 CDC42BPGQ6DT37 1551 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 WASLO00401 505 aaPredicted RBP7.72□□□□□ -1.17
CLCN3-201ENST00000347613 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms