RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 RWDD1Q9H446 243 aaPredicted RBP24.41■■□□□ 1.5
LYSMD4-202ENST00000344791 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 NSD2O96028 1365 aa24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 DIAPH1O60610 1272 aaKnown RBP24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 SPRYD3Q8NCJ5 442 aa24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 PIK3C2BO00750 1634 aa24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 HMOX1P09601 288 aa24.4■■□□□ 1.5
LYSMD4-202ENST00000344791 NOB1Q9ULX3 412 aaKnown RBP24.39■■□□□ 1.5
LYSMD4-202ENST00000344791 MYO5BQ9ULV0 1848 aa24.39■■□□□ 1.49
LYSMD4-202ENST00000344791 THUMPD2Q9BTF0 503 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-202ENST00000344791 NEO1Q92859 1461 aa24.38■■□□□ 1.49
LYSMD4-202ENST00000344791 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-202ENST00000344791 GSE1Q14687 1217 aa24.36■■□□□ 1.49
LYSMD4-202ENST00000344791 PUS7Q96PZ0 661 aaKnown RBP24.36■■□□□ 1.49
LYSMD4-202ENST00000344791 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
LYSMD4-202ENST00000344791 ATAD2Q6PL18 1390 aa24.35■■□□□ 1.49
LYSMD4-202ENST00000344791 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
LYSMD4-202ENST00000344791 PRKAR2BP31323 418 aa24.35■■□□□ 1.49
LYSMD4-202ENST00000344791 PTPRMP28827 1452 aa24.34■■□□□ 1.49
LYSMD4-202ENST00000344791 UPF2Q9HAU5 1272 aaKnown RBP24.34■■□□□ 1.49
LYSMD4-202ENST00000344791 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
LYSMD4-202ENST00000344791 TMEM57Q8N5G2 664 aa24.33■■□□□ 1.49
LYSMD4-202ENST00000344791 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
LYSMD4-202ENST00000344791 ATF7IPQ6VMQ6 1270 aa24.32■■□□□ 1.48
LYSMD4-202ENST00000344791 ZRANB1Q9UGI0 708 aa24.32■■□□□ 1.48
LYSMD4-202ENST00000344791 ARHGAP31Q2M1Z3 1444 aa24.31■■□□□ 1.48
LYSMD4-202ENST00000344791 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
LYSMD4-202ENST00000344791 MFAP1P55081 439 aaKnown RBP24.3■■□□□ 1.48
LYSMD4-202ENST00000344791 CD163L1Q9NR16 1453 aa24.3■■□□□ 1.48
LYSMD4-202ENST00000344791 BRPF3Q9ULD4 1205 aa24.3■■□□□ 1.48
LYSMD4-202ENST00000344791 PHACTR3Q96KR7 559 aa24.29■■□□□ 1.48
LYSMD4-202ENST00000344791 BECN1Q14457 450 aa24.28■■□□□ 1.48
LYSMD4-202ENST00000344791 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
LYSMD4-202ENST00000344791 NME9Q86XW9 330 aa24.27■■□□□ 1.48
LYSMD4-202ENST00000344791 DDX19BQ9UMR2 479 aa24.27■■□□□ 1.48
LYSMD4-202ENST00000344791 TXNDC2Q86VQ3 553 aa24.26■■□□□ 1.47
LYSMD4-202ENST00000344791 RICTORQ6R327 1708 aa24.26■■□□□ 1.47
LYSMD4-202ENST00000344791 TMEM131LA2VDJ0 1609 aa24.26■■□□□ 1.47
LYSMD4-202ENST00000344791 C1orf115Q9H7X2 142 aa24.25■■□□□ 1.47
LYSMD4-202ENST00000344791 COL3A1P02461 1466 aaPredicted RBP24.25■■□□□ 1.47
LYSMD4-202ENST00000344791 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
LYSMD4-202ENST00000344791 NUTM2FA1L443 756 aa24.25■■□□□ 1.47
LYSMD4-202ENST00000344791 PREX1Q8TCU6 1659 aa24.24■■□□□ 1.47
LYSMD4-202ENST00000344791 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
LYSMD4-202ENST00000344791 AAMPQ13685 434 aa24.24■■□□□ 1.47
LYSMD4-202ENST00000344791 RRS1Q15050 365 aaKnown RBP24.24■■□□□ 1.47
LYSMD4-202ENST00000344791 TBC1D32Q96NH3 1257 aa24.23■■□□□ 1.47
LYSMD4-202ENST00000344791 NLRP1Q9C000 1473 aa24.23■■□□□ 1.47
LYSMD4-202ENST00000344791 LNPKQ9C0E8 428 aa24.23■■□□□ 1.47
LYSMD4-202ENST00000344791 ARXQ96QS3 562 aa24.22■■□□□ 1.47
LYSMD4-202ENST00000344791 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
LYSMD4-202ENST00000344791 TSPYL6Q8N831 410 aa24.21■■□□□ 1.47
LYSMD4-202ENST00000344791 TBC1D2Q9BYX2 928 aa24.21■■□□□ 1.47
LYSMD4-202ENST00000344791 RSPH6AQ9H0K4 717 aa24.21■■□□□ 1.47
LYSMD4-202ENST00000344791 CT47B1P0C2W7 299 aaPredicted RBP24.21■■□□□ 1.47
LYSMD4-202ENST00000344791 FCHSD2O94868 740 aa24.2■■□□□ 1.46
LYSMD4-202ENST00000344791 FAM83GA6ND36 823 aa24.19■■□□□ 1.46
LYSMD4-202ENST00000344791 SOX12O15370 315 aa24.19■■□□□ 1.46
LYSMD4-202ENST00000344791 DCTN1Q14203 1278 aa24.19■■□□□ 1.46
LYSMD4-202ENST00000344791 IPO8O15397 1037 aaKnown RBP24.18■■□□□ 1.46
LYSMD4-202ENST00000344791 PNNQ9H307 717 aaKnown RBP24.18■■□□□ 1.46
LYSMD4-202ENST00000344791 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
LYSMD4-202ENST00000344791 KIF16BQ96L93 1317 aa24.18■■□□□ 1.46
LYSMD4-202ENST00000344791 ZBTB40Q9NUA8 1239 aa24.17■■□□□ 1.46
LYSMD4-202ENST00000344791 TSPOAP1O95153 1857 aa24.17■■□□□ 1.46
LYSMD4-202ENST00000344791 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
LYSMD4-202ENST00000344791 C22orf23Q9BZE7 217 aa24.16■■□□□ 1.46
LYSMD4-202ENST00000344791 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
LYSMD4-202ENST00000344791 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
LYSMD4-202ENST00000344791 IL16Q14005 1332 aa24.15■■□□□ 1.46
LYSMD4-202ENST00000344791 HDAC1Q13547 482 aaPredicted RBP24.15■■□□□ 1.46
LYSMD4-202ENST00000344791 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.46
LYSMD4-202ENST00000344791 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.46
LYSMD4-202ENST00000344791 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
LYSMD4-202ENST00000344791 NFE2L2Q16236 605 aa24.13■■□□□ 1.45
LYSMD4-202ENST00000344791 ESF1Q9H501 851 aaKnown RBP24.13■■□□□ 1.45
LYSMD4-202ENST00000344791 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
LYSMD4-202ENST00000344791 PPIP5K1Q6PFW1 1433 aa24.12■■□□□ 1.45
LYSMD4-202ENST00000344791 ANKRD45Q5TZF3 282 aa24.12■■□□□ 1.45
LYSMD4-202ENST00000344791 NUDT16Q96DE0 195 aaKnown RBP24.12■■□□□ 1.45
LYSMD4-202ENST00000344791 MBIPQ9NS73 344 aa24.12■■□□□ 1.45
LYSMD4-202ENST00000344791 METP08581 1390 aa24.11■■□□□ 1.45
LYSMD4-202ENST00000344791 SMC5Q8IY18 1101 aa24.11■■□□□ 1.45
LYSMD4-202ENST00000344791 COG3Q96JB2 828 aa24.1■■□□□ 1.45
LYSMD4-202ENST00000344791 VAMP4O75379 141 aa24.1■■□□□ 1.45
LYSMD4-202ENST00000344791 A2ML1A8K2U0 1454 aa24.09■■□□□ 1.45
LYSMD4-202ENST00000344791 IL13P35225 146 aa24.09■■□□□ 1.45
LYSMD4-202ENST00000344791 MED14O60244 1454 aa24.08■■□□□ 1.45
LYSMD4-202ENST00000344791 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.45
LYSMD4-202ENST00000344791 ALDH1L2Q3SY69 923 aa24.08■■□□□ 1.44
LYSMD4-202ENST00000344791 C8orf58Q8NAV2 365 aa24.08■■□□□ 1.44
LYSMD4-202ENST00000344791 ANTXR1Q9H6X2 564 aa24.08■■□□□ 1.44
LYSMD4-202ENST00000344791 TWISTNBQ3B726 338 aaPredicted RBP24.07■■□□□ 1.44
LYSMD4-202ENST00000344791 CHD1LQ86WJ1 897 aa24.07■■□□□ 1.44
LYSMD4-202ENST00000344791 AEBP1Q8IUX7 1158 aa24.07■■□□□ 1.44
LYSMD4-202ENST00000344791 KRT24Q2M2I5 525 aa24.06■■□□□ 1.44
LYSMD4-202ENST00000344791 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
LYSMD4-202ENST00000344791 MRPL50Q8N5N7 158 aaKnown RBP24.05■■□□□ 1.44
LYSMD4-202ENST00000344791 CLTCQ00610 1675 aaKnown RBP24.05■■□□□ 1.44
LYSMD4-202ENST00000344791 GNAI1P63096 354 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms