RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
CLDN18-202ENST00000343735 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
CLDN18-202ENST00000343735 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
CLDN18-202ENST00000343735 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
CLDN18-202ENST00000343735 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
CLDN18-202ENST00000343735 MORC1Q86VD1 984 aa13.1□□□□□ -0.31
CLDN18-202ENST00000343735 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
CLDN18-202ENST00000343735 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
CLDN18-202ENST00000343735 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
CLDN18-202ENST00000343735 TTC21AQ8NDW8 1320 aa13.09□□□□□ -0.31
CLDN18-202ENST00000343735 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
CLDN18-202ENST00000343735 AKAP12Q02952 1782 aa13.08□□□□□ -0.32
CLDN18-202ENST00000343735 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
CLDN18-202ENST00000343735 USP6P35125 1406 aa13.07□□□□□ -0.32
CLDN18-202ENST00000343735 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
CLDN18-202ENST00000343735 C1orf167Q5SNV9 1468 aa13.06□□□□□ -0.32
CLDN18-202ENST00000343735 FYB1O15117 783 aa13.06□□□□□ -0.32
CLDN18-202ENST00000343735 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLDN18-202ENST00000343735 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 PSME1Q06323 249 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 COG3Q96JB2 828 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 MST1RQ04912 1400 aa13.05□□□□□ -0.32
CLDN18-202ENST00000343735 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
CLDN18-202ENST00000343735 RGPD8O14715 1765 aaPredicted RBP13.03□□□□□ -0.32
CLDN18-202ENST00000343735 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
CLDN18-202ENST00000343735 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
CLDN18-202ENST00000343735 GGNBP2Q9H3C7 697 aa13.03□□□□□ -0.32
CLDN18-202ENST00000343735 SSH2Q76I76 1423 aa13.03□□□□□ -0.32
CLDN18-202ENST00000343735 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.32
CLDN18-202ENST00000343735 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
CLDN18-202ENST00000343735 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
CLDN18-202ENST00000343735 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
CLDN18-202ENST00000343735 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
CLDN18-202ENST00000343735 NRKQ7Z2Y5 1582 aa13.01□□□□□ -0.33
CLDN18-202ENST00000343735 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
CLDN18-202ENST00000343735 USP31Q70CQ4 1352 aa13□□□□□ -0.33
CLDN18-202ENST00000343735 NME9Q86XW9 330 aa13□□□□□ -0.33
CLDN18-202ENST00000343735 LTBP4Q8N2S1 1624 aa13□□□□□ -0.33
CLDN18-202ENST00000343735 MSH5O43196 834 aa13□□□□□ -0.33
CLDN18-202ENST00000343735 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
CLDN18-202ENST00000343735 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CLDN18-202ENST00000343735 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
CLDN18-202ENST00000343735 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
CLDN18-202ENST00000343735 FOXO3O43524 673 aa12.98□□□□□ -0.33
CLDN18-202ENST00000343735 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
CLDN18-202ENST00000343735 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
CLDN18-202ENST00000343735 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
CLDN18-202ENST00000343735 NLRP6P59044 892 aa12.97□□□□□ -0.33
CLDN18-202ENST00000343735 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLDN18-202ENST00000343735 INSRP06213 1382 aa12.97□□□□□ -0.33
CLDN18-202ENST00000343735 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.33
CLDN18-202ENST00000343735 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.33
CLDN18-202ENST00000343735 MTHFSP49914 203 aa12.96□□□□□ -0.33
CLDN18-202ENST00000343735 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
CLDN18-202ENST00000343735 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
CLDN18-202ENST00000343735 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
CLDN18-202ENST00000343735 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
CLDN18-202ENST00000343735 TOM1O60784 492 aa12.94□□□□□ -0.34
CLDN18-202ENST00000343735 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
CLDN18-202ENST00000343735 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
CLDN18-202ENST00000343735 KIF24Q5T7B8 1368 aa12.93□□□□□ -0.34
CLDN18-202ENST00000343735 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
CLDN18-202ENST00000343735 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
CLDN18-202ENST00000343735 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
CLDN18-202ENST00000343735 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
CLDN18-202ENST00000343735 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
CLDN18-202ENST00000343735 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
CLDN18-202ENST00000343735 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
CLDN18-202ENST00000343735 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
CLDN18-202ENST00000343735 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
CLDN18-202ENST00000343735 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
CLDN18-202ENST00000343735 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
CLDN18-202ENST00000343735 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
CLDN18-202ENST00000343735 PXDNQ92626 1479 aa12.9□□□□□ -0.34
CLDN18-202ENST00000343735 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.35
CLDN18-202ENST00000343735 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.35
CLDN18-202ENST00000343735 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
CLDN18-202ENST00000343735 USP19O94966 1318 aa12.88□□□□□ -0.35
CLDN18-202ENST00000343735 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
CLDN18-202ENST00000343735 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
CLDN18-202ENST00000343735 AMPHP49418 695 aa12.88□□□□□ -0.35
CLDN18-202ENST00000343735 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
CLDN18-202ENST00000343735 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
CLDN18-202ENST00000343735 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 FLT4P35916 1363 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
CLDN18-202ENST00000343735 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
CLDN18-202ENST00000343735 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
CLDN18-202ENST00000343735 SLIT3O75094 1523 aa12.86□□□□□ -0.35
CLDN18-202ENST00000343735 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
CLDN18-202ENST00000343735 GCP02774 474 aa12.86□□□□□ -0.35
CLDN18-202ENST00000343735 NPM2Q86SE8 214 aaKnown RBP12.86□□□□□ -0.35
CLDN18-202ENST00000343735 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
CLDN18-202ENST00000343735 MAP3K19Q56UN5 1328 aa12.85□□□□□ -0.35
CLDN18-202ENST00000343735 PLIN1O60240 522 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms