RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 NINLQ9Y2I6 1382 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 DUOX2Q9NRD8 1548 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 REC8O95072 547 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 MCTP1Q6DN14 999 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
RDX-201ENST00000343115 PTMSP20962 102 aa20.14■□□□□ 0.81
RDX-201ENST00000343115 TEFQ10587 303 aa20.14■□□□□ 0.81
RDX-201ENST00000343115 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
RDX-201ENST00000343115 RTEL1-TNFRSF6BF6WH68 1400 aa20.13■□□□□ 0.81
RDX-201ENST00000343115 CT47B1P0C2W7 299 aaPredicted RBP20.13■□□□□ 0.81
RDX-201ENST00000343115 NFE2L2Q16236 605 aa20.13■□□□□ 0.81
RDX-201ENST00000343115 INTS3Q68E01 1043 aaKnown RBP20.13■□□□□ 0.81
RDX-201ENST00000343115 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
RDX-201ENST00000343115 MCM10Q7L590 875 aa20.12■□□□□ 0.81
RDX-201ENST00000343115 MCM4P33991 863 aa20.11■□□□□ 0.81
RDX-201ENST00000343115 FYB1O15117 783 aa20.11■□□□□ 0.81
RDX-201ENST00000343115 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
RDX-201ENST00000343115 NUDT16Q96DE0 195 aaKnown RBP20.11■□□□□ 0.81
RDX-201ENST00000343115 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
RDX-201ENST00000343115 ZRSR1Q15695 479 aaKnown RBP20.1■□□□□ 0.81
RDX-201ENST00000343115 SKOR2Q2VWA4 1001 aaPredicted RBP20.09■□□□□ 0.81
RDX-201ENST00000343115 CCDC61Q9Y6R9 512 aa20.09■□□□□ 0.81
RDX-201ENST00000343115 MBD5Q9P267 1494 aa20.08■□□□□ 0.81
RDX-201ENST00000343115 NEK4P51957 841 aa20.07■□□□□ 0.8
RDX-201ENST00000343115 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
RDX-201ENST00000343115 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
RDX-201ENST00000343115 CHD1O14646 1710 aa20.05■□□□□ 0.8
RDX-201ENST00000343115 ZRANB1Q9UGI0 708 aa20.04■□□□□ 0.8
RDX-201ENST00000343115 ABCC10Q5T3U5 1492 aa20.04■□□□□ 0.8
RDX-201ENST00000343115 DRC7Q8IY82 874 aa20.04■□□□□ 0.8
RDX-201ENST00000343115 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
RDX-201ENST00000343115 ABTB2Q8N961 1025 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 SYAP1Q96A49 352 aaPredicted RBP20.03■□□□□ 0.8
RDX-201ENST00000343115 TBC1D32Q96NH3 1257 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
RDX-201ENST00000343115 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
RDX-201ENST00000343115 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 PSME1Q06323 249 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 RNF214Q8ND24 703 aa20.03■□□□□ 0.8
RDX-201ENST00000343115 KDM5CP41229 1560 aa20.02■□□□□ 0.8
RDX-201ENST00000343115 MRE11P49959 708 aa20.02■□□□□ 0.8
RDX-201ENST00000343115 DIAPH3Q9NSV4 1193 aa20.02■□□□□ 0.8
RDX-201ENST00000343115 EXOC6BQ9Y2D4 811 aa20.02■□□□□ 0.8
RDX-201ENST00000343115 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
RDX-201ENST00000343115 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
RDX-201ENST00000343115 F6X3S4 739 aa20.02■□□□□ 0.8
RDX-201ENST00000343115 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
RDX-201ENST00000343115 NUCB2P80303 420 aa20.02■□□□□ 0.79
RDX-201ENST00000343115 GPATCH3Q96I76 525 aa20.02■□□□□ 0.79
RDX-201ENST00000343115 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
RDX-201ENST00000343115 RBM33Q96EV2 1170 aaKnown RBP20.01■□□□□ 0.79
RDX-201ENST00000343115 MAGI2Q86UL8 1455 aa20.01■□□□□ 0.79
RDX-201ENST00000343115 RSPH6AQ9H0K4 717 aa20.01■□□□□ 0.79
RDX-201ENST00000343115 ABCA8O94911 1581 aa20■□□□□ 0.79
RDX-201ENST00000343115 K7ELQ4 463 aaPredicted RBP20■□□□□ 0.79
RDX-201ENST00000343115 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
RDX-201ENST00000343115 ZNF692Q9BU19 519 aaPredicted RBP20■□□□□ 0.79
RDX-201ENST00000343115 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
RDX-201ENST00000343115 IL1RAPL2Q9NP60 686 aa19.99■□□□□ 0.79
RDX-201ENST00000343115 MBIPQ9NS73 344 aa19.98■□□□□ 0.79
RDX-201ENST00000343115 KIAA2012Q0VF49 1180 aa19.98■□□□□ 0.79
RDX-201ENST00000343115 TSPYL6Q8N831 410 aa19.98■□□□□ 0.79
RDX-201ENST00000343115 PHACTR3Q96KR7 559 aa19.98■□□□□ 0.79
RDX-201ENST00000343115 HSP90B1P14625 803 aaKnown RBP19.98■□□□□ 0.79
RDX-201ENST00000343115 NCKAP5LQ9HCH0 1330 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 ALDH1L2Q3SY69 923 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 CHMP4AQ9BY43 222 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 GNAI2P04899 355 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 RABEP1Q15276 862 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
RDX-201ENST00000343115 ANKRD36BQ8N2N9 1353 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
RDX-201ENST00000343115 NASPP49321 788 aaPredicted RBP19.97■□□□□ 0.79
RDX-201ENST00000343115 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
RDX-201ENST00000343115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.96■□□□□ 0.79
RDX-201ENST00000343115 IFIT2P09913 472 aaKnown RBP19.96■□□□□ 0.79
RDX-201ENST00000343115 ABCC11Q96J66 1382 aa19.96■□□□□ 0.79
RDX-201ENST00000343115 ZMYM4Q5VZL5 1548 aa19.96■□□□□ 0.79
RDX-201ENST00000343115 GNAI3P08754 354 aa19.96■□□□□ 0.79
RDX-201ENST00000343115 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
RDX-201ENST00000343115 PLA2R1Q13018 1463 aa19.95■□□□□ 0.78
RDX-201ENST00000343115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.95■□□□□ 0.78
RDX-201ENST00000343115 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
RDX-201ENST00000343115 IFT57Q9NWB7 429 aa19.95■□□□□ 0.78
RDX-201ENST00000343115 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
RDX-201ENST00000343115 KRT24Q2M2I5 525 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 POLKQ9UBT6 870 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 VPS37CA5D8V6 355 aaPredicted RBP19.94■□□□□ 0.78
RDX-201ENST00000343115 GORABQ5T7V8 394 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 MPNDQ8N594 471 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 C8orf58Q8NAV2 365 aa19.94■□□□□ 0.78
RDX-201ENST00000343115 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms