RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 ALDH1L2Q3SY69 923 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
HIPK1-201ENST00000340480 DUSP27Q5VZP5 1158 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 BCL2L13Q9BXK5 485 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 ISY1Q9ULR0 285 aaKnown RBP9.47□□□□□ -0.89
HIPK1-201ENST00000340480 KDM5AP29375 1690 aaKnown RBP9.47□□□□□ -0.89
HIPK1-201ENST00000340480 ATF3P18847 181 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 FGD1P98174 961 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
HIPK1-201ENST00000340480 SLC26A8Q96RN1 970 aa9.47□□□□□ -0.89
HIPK1-201ENST00000340480 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.89
HIPK1-201ENST00000340480 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
HIPK1-201ENST00000340480 HMOX1P09601 288 aa9.46□□□□□ -0.9
HIPK1-201ENST00000340480 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
HIPK1-201ENST00000340480 WAPLQ7Z5K2 1190 aa9.46□□□□□ -0.9
HIPK1-201ENST00000340480 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
HIPK1-201ENST00000340480 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
HIPK1-201ENST00000340480 IFT57Q9NWB7 429 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 TRPM1Q7Z4N2 1603 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 GLIPR1L2Q4G1C9 344 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 AMOTL2Q9Y2J4 779 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 KIF1BO60333 1816 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 ABTB2Q8N961 1025 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 GPATCH3Q96I76 525 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 NEURL4Q96JN8 1562 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
HIPK1-201ENST00000340480 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 LTV1Q96GA3 475 aaPredicted RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 MVPQ14764 893 aaKnown RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 NRDCO43847 1150 aa9.44□□□□□ -0.9
HIPK1-201ENST00000340480 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 FYB1O15117 783 aa9.44□□□□□ -0.9
HIPK1-201ENST00000340480 GCC1Q96CN9 775 aa9.44□□□□□ -0.9
HIPK1-201ENST00000340480 RNF17Q9BXT8 1623 aaKnown RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
HIPK1-201ENST00000340480 PLEKHO1Q53GL0 409 aaPredicted RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 L1TD1Q5T7N2 865 aaKnown RBP9.44□□□□□ -0.9
HIPK1-201ENST00000340480 ERVK-7P63135 1459 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 KRI1Q8N9T8 703 aaKnown RBP9.43□□□□□ -0.9
HIPK1-201ENST00000340480 PANK1Q8TE04 598 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 MAP3K4Q9Y6R4 1608 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 HSP90AB4PQ58FF6 505 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 SULT6B1Q6IMI4 303 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 DDX58O95786 925 aaKnown RBP9.43□□□□□ -0.9
HIPK1-201ENST00000340480 RNF123Q5XPI4 1314 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 G3V3G9 751 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 GNAI3P08754 354 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
HIPK1-201ENST00000340480 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
HIPK1-201ENST00000340480 RARSP54136 660 aaKnown RBP9.42□□□□□ -0.9
HIPK1-201ENST00000340480 CCDC30Q5VVM6 783 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 CLTCL1P53675 1640 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 ADGRB3O60242 1522 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 ELL2O00472 640 aaPredicted RBP9.42□□□□□ -0.9
HIPK1-201ENST00000340480 SLC4A10Q6U841 1118 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 KCNJ4P48050 445 aa9.42□□□□□ -0.9
HIPK1-201ENST00000340480 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 BCAR3O75815 825 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 KIAA1211Q6ZU35 1233 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 NME9Q86XW9 330 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 MADDQ8WXG6 1647 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 NLRP1Q9C000 1473 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 GLI2P10070 1586 aa9.41□□□□□ -0.9
HIPK1-201ENST00000340480 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
HIPK1-201ENST00000340480 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
HIPK1-201ENST00000340480 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.9
HIPK1-201ENST00000340480 AGLP35573 1532 aa9.4□□□□□ -0.9
HIPK1-201ENST00000340480 REC8O95072 547 aa9.4□□□□□ -0.91
HIPK1-201ENST00000340480 TTC5Q8N0Z6 440 aa9.4□□□□□ -0.91
HIPK1-201ENST00000340480 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.91
HIPK1-201ENST00000340480 BACH2Q9BYV9 841 aa9.4□□□□□ -0.91
HIPK1-201ENST00000340480 FKBP5Q13451 457 aaPredicted RBP9.39□□□□□ -0.91
HIPK1-201ENST00000340480 TSR2Q969E8 191 aaKnown RBP9.39□□□□□ -0.91
HIPK1-201ENST00000340480 ACEP12821 1306 aa9.39□□□□□ -0.91
HIPK1-201ENST00000340480 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
HIPK1-201ENST00000340480 E9PCH4 1651 aa9.39□□□□□ -0.91
HIPK1-201ENST00000340480 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
HIPK1-201ENST00000340480 ATP7BP35670 1465 aa9.38□□□□□ -0.91
HIPK1-201ENST00000340480 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
HIPK1-201ENST00000340480 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
HIPK1-201ENST00000340480 PTMAP06454 111 aaKnown RBP9.38□□□□□ -0.91
HIPK1-201ENST00000340480 NAP1L2Q9ULW6 460 aaPredicted RBP9.38□□□□□ -0.91
HIPK1-201ENST00000340480 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
HIPK1-201ENST00000340480 NOB1Q9ULX3 412 aaKnown RBP9.38□□□□□ -0.91
HIPK1-201ENST00000340480 ST18O60284 1047 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 RRS1Q15050 365 aaKnown RBP9.37□□□□□ -0.91
HIPK1-201ENST00000340480 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 ZC3H13Q5T200 1668 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms