RNA–Protein interactions for RNA: ENST00000339708.9

PDE8A-202, Transcript of phosphodiesterase 8A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8A, Length 2,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-202ENST00000339708 RIPK4P57078 832 aa23.91■■□□□ 1.42
PDE8A-202ENST00000339708 FTSJ3Q8IY81 847 aaKnown RBP23.91■■□□□ 1.42
PDE8A-202ENST00000339708 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
PDE8A-202ENST00000339708 PDZRN3Q9UPQ7 1066 aa23.9■■□□□ 1.42
PDE8A-202ENST00000339708 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.42
PDE8A-202ENST00000339708 DIAPH1O60610 1272 aaKnown RBP23.89■■□□□ 1.41
PDE8A-202ENST00000339708 USP19O94966 1318 aa23.89■■□□□ 1.41
PDE8A-202ENST00000339708 SSH1Q8WYL5 1049 aa23.88■■□□□ 1.41
PDE8A-202ENST00000339708 MVPQ14764 893 aaKnown RBP23.88■■□□□ 1.41
PDE8A-202ENST00000339708 NFKBIBQ15653 356 aa23.87■■□□□ 1.41
PDE8A-202ENST00000339708 DZIP1LQ8IYY4 767 aaKnown RBP23.87■■□□□ 1.41
PDE8A-202ENST00000339708 USP35Q9P2H5 1018 aa23.86■■□□□ 1.41
PDE8A-202ENST00000339708 ALKQ9UM73 1620 aa23.85■■□□□ 1.41
PDE8A-202ENST00000339708 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
PDE8A-202ENST00000339708 TRIM27P14373 513 aa23.85■■□□□ 1.41
PDE8A-202ENST00000339708 NLRP1Q9C000 1473 aa23.85■■□□□ 1.41
PDE8A-202ENST00000339708 RWDD1Q9H446 243 aaPredicted RBP23.84■■□□□ 1.41
PDE8A-202ENST00000339708 ADGRB2O60241 1585 aa23.83■■□□□ 1.41
PDE8A-202ENST00000339708 ITPRIPQ8IWB1 547 aa23.83■■□□□ 1.41
PDE8A-202ENST00000339708 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
PDE8A-202ENST00000339708 HMOX1P09601 288 aa23.83■■□□□ 1.4
PDE8A-202ENST00000339708 ZRANB1Q9UGI0 708 aa23.81■■□□□ 1.4
PDE8A-202ENST00000339708 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
PDE8A-202ENST00000339708 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
PDE8A-202ENST00000339708 PRKAR2BP31323 418 aa23.81■■□□□ 1.4
PDE8A-202ENST00000339708 POLKQ9UBT6 870 aa23.81■■□□□ 1.4
PDE8A-202ENST00000339708 THUMPD2Q9BTF0 503 aaKnown RBP23.8■■□□□ 1.4
PDE8A-202ENST00000339708 TSPOAP1O95153 1857 aa23.8■■□□□ 1.4
PDE8A-202ENST00000339708 NCBP3Q53F19 620 aaKnown RBP23.79■■□□□ 1.4
PDE8A-202ENST00000339708 EMILIN1Q9Y6C2 1016 aa23.78■■□□□ 1.4
PDE8A-202ENST00000339708 ATF7IPQ6VMQ6 1270 aa23.78■■□□□ 1.4
PDE8A-202ENST00000339708 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
PDE8A-202ENST00000339708 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
PDE8A-202ENST00000339708 AAMPQ13685 434 aa23.77■■□□□ 1.4
PDE8A-202ENST00000339708 TMEM57Q8N5G2 664 aa23.77■■□□□ 1.4
PDE8A-202ENST00000339708 NME9Q86XW9 330 aa23.77■■□□□ 1.39
PDE8A-202ENST00000339708 FRAT2O75474 233 aaPredicted RBP23.76■■□□□ 1.39
PDE8A-202ENST00000339708 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
PDE8A-202ENST00000339708 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
PDE8A-202ENST00000339708 RIMS2Q9UQ26 1411 aa23.75■■□□□ 1.39
PDE8A-202ENST00000339708 RSPH6AQ9H0K4 717 aa23.75■■□□□ 1.39
PDE8A-202ENST00000339708 A2ML1A8K2U0 1454 aa23.74■■□□□ 1.39
PDE8A-202ENST00000339708 FCHSD2O94868 740 aa23.74■■□□□ 1.39
PDE8A-202ENST00000339708 ELL2O00472 640 aaPredicted RBP23.73■■□□□ 1.39
PDE8A-202ENST00000339708 MED14O60244 1454 aa23.73■■□□□ 1.39
PDE8A-202ENST00000339708 SLKQ9H2G2 1235 aaPredicted RBP23.72■■□□□ 1.39
PDE8A-202ENST00000339708 DDX19BQ9UMR2 479 aa23.72■■□□□ 1.39
PDE8A-202ENST00000339708 CLTCQ00610 1675 aaKnown RBP23.72■■□□□ 1.39
PDE8A-202ENST00000339708 IL16Q14005 1332 aa23.71■■□□□ 1.39
PDE8A-202ENST00000339708 METP08581 1390 aa23.71■■□□□ 1.39
PDE8A-202ENST00000339708 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.39
PDE8A-202ENST00000339708 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.39
PDE8A-202ENST00000339708 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
PDE8A-202ENST00000339708 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
PDE8A-202ENST00000339708 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
PDE8A-202ENST00000339708 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
PDE8A-202ENST00000339708 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
PDE8A-202ENST00000339708 VIRMAQ69YN4 1812 aaKnown RBP23.67■■□□□ 1.38
PDE8A-202ENST00000339708 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
PDE8A-202ENST00000339708 NUDT16Q96DE0 195 aaKnown RBP23.67■■□□□ 1.38
PDE8A-202ENST00000339708 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
PDE8A-202ENST00000339708 GSE1Q14687 1217 aa23.66■■□□□ 1.38
PDE8A-202ENST00000339708 ZBTB40Q9NUA8 1239 aa23.66■■□□□ 1.38
PDE8A-202ENST00000339708 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
PDE8A-202ENST00000339708 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
PDE8A-202ENST00000339708 IL27Q8NEV9 243 aa23.65■■□□□ 1.38
PDE8A-202ENST00000339708 TBC1D32Q96NH3 1257 aa23.65■■□□□ 1.38
PDE8A-202ENST00000339708 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
PDE8A-202ENST00000339708 SPRYD3Q8NCJ5 442 aa23.65■■□□□ 1.38
PDE8A-202ENST00000339708 KIF20BQ96Q89 1820 aa23.64■■□□□ 1.38
PDE8A-202ENST00000339708 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.38
PDE8A-202ENST00000339708 IL13P35225 146 aa23.64■■□□□ 1.38
PDE8A-202ENST00000339708 HDAC1Q13547 482 aaPredicted RBP23.64■■□□□ 1.38
PDE8A-202ENST00000339708 FAM135BQ49AJ0 1406 aa23.64■■□□□ 1.37
PDE8A-202ENST00000339708 KIF16BQ96L93 1317 aa23.64■■□□□ 1.37
PDE8A-202ENST00000339708 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
PDE8A-202ENST00000339708 MFAP1P55081 439 aaKnown RBP23.64■■□□□ 1.37
PDE8A-202ENST00000339708 BECN1Q14457 450 aa23.63■■□□□ 1.37
PDE8A-202ENST00000339708 C1orf115Q9H7X2 142 aa23.63■■□□□ 1.37
PDE8A-202ENST00000339708 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
PDE8A-202ENST00000339708 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
PDE8A-202ENST00000339708 LNPKQ9C0E8 428 aa23.61■■□□□ 1.37
PDE8A-202ENST00000339708 MAP2P11137 1827 aaKnown RBP23.61■■□□□ 1.37
PDE8A-202ENST00000339708 ATP7BP35670 1465 aa23.61■■□□□ 1.37
PDE8A-202ENST00000339708 VAMP4O75379 141 aa23.61■■□□□ 1.37
PDE8A-202ENST00000339708 COG3Q96JB2 828 aa23.61■■□□□ 1.37
PDE8A-202ENST00000339708 ALDH1L2Q3SY69 923 aa23.6■■□□□ 1.37
PDE8A-202ENST00000339708 SMC5Q8IY18 1101 aa23.6■■□□□ 1.37
PDE8A-202ENST00000339708 TBC1D2Q9BYX2 928 aa23.6■■□□□ 1.37
PDE8A-202ENST00000339708 MBIPQ9NS73 344 aa23.6■■□□□ 1.37
PDE8A-202ENST00000339708 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
PDE8A-202ENST00000339708 ZMYM3Q14202 1370 aa23.59■■□□□ 1.37
PDE8A-202ENST00000339708 SPATA31D1Q6ZQQ2 1576 aa23.59■■□□□ 1.37
PDE8A-202ENST00000339708 RTN4Q9NQC3 1192 aaKnown RBP23.59■■□□□ 1.37
PDE8A-202ENST00000339708 CPSF1Q10570 1443 aaKnown RBP23.59■■□□□ 1.37
PDE8A-202ENST00000339708 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
PDE8A-202ENST00000339708 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
PDE8A-202ENST00000339708 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
PDE8A-202ENST00000339708 DLC1Q96QB1 1528 aa23.58■■□□□ 1.37
PDE8A-202ENST00000339708 AGLP35573 1532 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms