RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 USP47Q96K76 1375 aa15.9■□□□□ 0.14
SLC28A1-202ENST00000338602 TOPAZ1Q8N9V7 1692 aa15.9■□□□□ 0.14
SLC28A1-202ENST00000338602 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
SLC28A1-202ENST00000338602 PUS7Q96PZ0 661 aaKnown RBP15.89■□□□□ 0.13
SLC28A1-202ENST00000338602 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
SLC28A1-202ENST00000338602 TMF1P82094 1093 aa15.87■□□□□ 0.13
SLC28A1-202ENST00000338602 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
SLC28A1-202ENST00000338602 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
SLC28A1-202ENST00000338602 CABLES1Q8TDN4 633 aa15.87■□□□□ 0.13
SLC28A1-202ENST00000338602 CDCA8Q53HL2 280 aa15.86■□□□□ 0.13
SLC28A1-202ENST00000338602 FNBP4Q8N3X1 1017 aaPredicted RBP15.86■□□□□ 0.13
SLC28A1-202ENST00000338602 TESK2Q96S53 571 aa15.86■□□□□ 0.13
SLC28A1-202ENST00000338602 USP21Q9UK80 565 aa15.86■□□□□ 0.13
SLC28A1-202ENST00000338602 TRPM3Q9HCF6 1732 aaPredicted RBP15.85■□□□□ 0.13
SLC28A1-202ENST00000338602 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
SLC28A1-202ENST00000338602 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
SLC28A1-202ENST00000338602 NLRP13Q86W25 1043 aa15.84■□□□□ 0.13
SLC28A1-202ENST00000338602 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
SLC28A1-202ENST00000338602 USP6P35125 1406 aa15.83■□□□□ 0.12
SLC28A1-202ENST00000338602 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.12
SLC28A1-202ENST00000338602 TRPC5Q9UL62 973 aaPredicted RBP15.83■□□□□ 0.12
SLC28A1-202ENST00000338602 ALS2Q96Q42 1657 aa15.82■□□□□ 0.12
SLC28A1-202ENST00000338602 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
SLC28A1-202ENST00000338602 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
SLC28A1-202ENST00000338602 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
SLC28A1-202ENST00000338602 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
SLC28A1-202ENST00000338602 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
SLC28A1-202ENST00000338602 TTC21AQ8NDW8 1320 aa15.8■□□□□ 0.12
SLC28A1-202ENST00000338602 NLRP6P59044 892 aa15.8■□□□□ 0.12
SLC28A1-202ENST00000338602 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
SLC28A1-202ENST00000338602 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
SLC28A1-202ENST00000338602 SLC12A5Q9H2X9 1139 aa15.79■□□□□ 0.12
SLC28A1-202ENST00000338602 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
SLC28A1-202ENST00000338602 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
SLC28A1-202ENST00000338602 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
SLC28A1-202ENST00000338602 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
SLC28A1-202ENST00000338602 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
SLC28A1-202ENST00000338602 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
SLC28A1-202ENST00000338602 SLIT2O94813 1529 aa15.76■□□□□ 0.11
SLC28A1-202ENST00000338602 USP19O94966 1318 aa15.76■□□□□ 0.11
SLC28A1-202ENST00000338602 ABCA3Q99758 1704 aa15.76■□□□□ 0.11
SLC28A1-202ENST00000338602 GCP02774 474 aa15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 ZC3H6P61129 1189 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 BCL9LQ86UU0 1499 aa15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 AKAP12Q02952 1782 aa15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 KCNH5Q8NCM2 988 aa15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 CCDC9Q9Y3X0 531 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-202ENST00000338602 ATRNO75882 1429 aa15.74■□□□□ 0.11
SLC28A1-202ENST00000338602 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
SLC28A1-202ENST00000338602 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
SLC28A1-202ENST00000338602 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
SLC28A1-202ENST00000338602 VPS72Q15906 364 aa15.73■□□□□ 0.11
SLC28A1-202ENST00000338602 COL14A1Q05707 1796 aaKnown RBP15.73■□□□□ 0.11
SLC28A1-202ENST00000338602 CD163L1Q9NR16 1453 aa15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 A0A1W2PP64 1363 aa15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 CPDO75976 1380 aa15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
SLC28A1-202ENST00000338602 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.11
SLC28A1-202ENST00000338602 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.11
SLC28A1-202ENST00000338602 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.11
SLC28A1-202ENST00000338602 EVA1CP58658 441 aa15.71■□□□□ 0.11
SLC28A1-202ENST00000338602 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
SLC28A1-202ENST00000338602 RGS12O14924 1447 aa15.71■□□□□ 0.1
SLC28A1-202ENST00000338602 CRYBG1Q9Y4K1 1723 aa15.7■□□□□ 0.1
SLC28A1-202ENST00000338602 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
SLC28A1-202ENST00000338602 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
SLC28A1-202ENST00000338602 PLCH1Q4KWH8 1693 aa15.69■□□□□ 0.1
SLC28A1-202ENST00000338602 NME9Q86XW9 330 aa15.69■□□□□ 0.1
SLC28A1-202ENST00000338602 PIK3C2AO00443 1686 aa15.68■□□□□ 0.1
SLC28A1-202ENST00000338602 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
SLC28A1-202ENST00000338602 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
SLC28A1-202ENST00000338602 SLIT3O75094 1523 aa15.68■□□□□ 0.1
SLC28A1-202ENST00000338602 SOX12O15370 315 aa15.67■□□□□ 0.1
SLC28A1-202ENST00000338602 COG3Q96JB2 828 aa15.67■□□□□ 0.1
SLC28A1-202ENST00000338602 AATKQ6ZMQ8 1374 aa15.65■□□□□ 0.1
SLC28A1-202ENST00000338602 A0A0G2JS52 829 aa15.64■□□□□ 0.09
SLC28A1-202ENST00000338602 MYT1Q01538 1121 aa15.64■□□□□ 0.09
SLC28A1-202ENST00000338602 ARHGEF25Q86VW2 580 aa15.64■□□□□ 0.09
SLC28A1-202ENST00000338602 SPATA31A5Q5VU36 1347 aa15.64■□□□□ 0.09
SLC28A1-202ENST00000338602 SPATA31A7Q8IWB4 1347 aa15.64■□□□□ 0.09
SLC28A1-202ENST00000338602 NRAPQ86VF7 1730 aa15.62■□□□□ 0.09
SLC28A1-202ENST00000338602 ONECUT3O60422 494 aaPredicted RBP15.62■□□□□ 0.09
SLC28A1-202ENST00000338602 FAM98CQ17RN3 349 aaKnown RBP15.62■□□□□ 0.09
SLC28A1-202ENST00000338602 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
SLC28A1-202ENST00000338602 GLI3P10071 1580 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 OVOS2A0A0J9YW53 1432 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 FYB1O15117 783 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 SPATA31A1Q5TZJ5 1347 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 OVOS2Q6IE36 1432 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 CCDC125Q86Z20 511 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 CAMTA1Q9Y6Y1 1673 aa15.61■□□□□ 0.09
SLC28A1-202ENST00000338602 CSB-PGBD3P0DP91 1061 aa15.6■□□□□ 0.09
SLC28A1-202ENST00000338602 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
SLC28A1-202ENST00000338602 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
SLC28A1-202ENST00000338602 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms