RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 TWISTNBQ3B726 338 aaPredicted RBP16.69■□□□□ 0.26
PRKCH-201ENST00000332981 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
PRKCH-201ENST00000332981 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
PRKCH-201ENST00000332981 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
PRKCH-201ENST00000332981 MRE11P49959 708 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 TBC1D9Q6ZT07 1266 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 MCM10Q7L590 875 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 ESPNB1AK53 854 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 IDI1Q13907 227 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 NME9Q86XW9 330 aa16.68■□□□□ 0.26
PRKCH-201ENST00000332981 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
PRKCH-201ENST00000332981 F6X3S4 739 aa16.67■□□□□ 0.26
PRKCH-201ENST00000332981 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
PRKCH-201ENST00000332981 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
PRKCH-201ENST00000332981 GAS2L3Q86XJ1 694 aa16.67■□□□□ 0.26
PRKCH-201ENST00000332981 FYB1O15117 783 aa16.67■□□□□ 0.26
PRKCH-201ENST00000332981 ANTXR1Q9H6X2 564 aa16.66■□□□□ 0.26
PRKCH-201ENST00000332981 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
PRKCH-201ENST00000332981 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
PRKCH-201ENST00000332981 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
PRKCH-201ENST00000332981 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
PRKCH-201ENST00000332981 SAMD9LQ8IVG5 1584 aa16.65■□□□□ 0.26
PRKCH-201ENST00000332981 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
PRKCH-201ENST00000332981 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
PRKCH-201ENST00000332981 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
PRKCH-201ENST00000332981 PKP1Q13835 747 aa16.64■□□□□ 0.25
PRKCH-201ENST00000332981 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
PRKCH-201ENST00000332981 EXOC6BQ9Y2D4 811 aa16.64■□□□□ 0.25
PRKCH-201ENST00000332981 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 K7ELQ4 463 aaPredicted RBP16.63■□□□□ 0.25
PRKCH-201ENST00000332981 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 LMOD2Q6P5Q4 547 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 CDC42BPAQ5VT25 1732 aa16.63■□□□□ 0.25
PRKCH-201ENST00000332981 INSRP06213 1382 aa16.62■□□□□ 0.25
PRKCH-201ENST00000332981 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
PRKCH-201ENST00000332981 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
PRKCH-201ENST00000332981 NEK4P51957 841 aa16.62■□□□□ 0.25
PRKCH-201ENST00000332981 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
PRKCH-201ENST00000332981 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
PRKCH-201ENST00000332981 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
PRKCH-201ENST00000332981 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
PRKCH-201ENST00000332981 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKCH-201ENST00000332981 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
PRKCH-201ENST00000332981 PODXL2Q9NZ53 605 aa16.61■□□□□ 0.25
PRKCH-201ENST00000332981 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-201ENST00000332981 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-201ENST00000332981 MBIPQ9NS73 344 aa16.6■□□□□ 0.25
PRKCH-201ENST00000332981 CDC45O75419 566 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 EIF2S2P20042 333 aaKnown RBP16.59■□□□□ 0.25
PRKCH-201ENST00000332981 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
PRKCH-201ENST00000332981 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 TRPM1Q7Z4N2 1603 aa16.59■□□□□ 0.25
PRKCH-201ENST00000332981 COG3Q96JB2 828 aa16.58■□□□□ 0.25
PRKCH-201ENST00000332981 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.24
PRKCH-201ENST00000332981 NUCB1Q02818 461 aa16.58■□□□□ 0.24
PRKCH-201ENST00000332981 SYCE3A1L190 88 aa16.58■□□□□ 0.24
PRKCH-201ENST00000332981 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
PRKCH-201ENST00000332981 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
PRKCH-201ENST00000332981 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
PRKCH-201ENST00000332981 NUP160Q12769 1436 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 ERVK-7P63135 1459 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 PLCH2O75038 1416 aa16.56■□□□□ 0.24
PRKCH-201ENST00000332981 ST18O60284 1047 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 GNAI1P63096 354 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-201ENST00000332981 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-201ENST00000332981 ATP10AO60312 1499 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 MEIS3Q99687 375 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRKCH-201ENST00000332981 PTPRTO14522 1441 aa16.55■□□□□ 0.24
PRKCH-201ENST00000332981 BAG4O95429 457 aaKnown RBP16.54■□□□□ 0.24
PRKCH-201ENST00000332981 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
PRKCH-201ENST00000332981 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-201ENST00000332981 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 DUOX2Q9NRD8 1548 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-201ENST00000332981 FOXO3O43524 673 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 FANCAO15360 1455 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-201ENST00000332981 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
PRKCH-201ENST00000332981 VAMP4O75379 141 aa16.52■□□□□ 0.24
PRKCH-201ENST00000332981 KCNJ4P48050 445 aa16.52■□□□□ 0.24
PRKCH-201ENST00000332981 ZHX1Q9UKY1 873 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-201ENST00000332981 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
PRKCH-201ENST00000332981 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.23
PRKCH-201ENST00000332981 ABCA8O94911 1581 aa16.51■□□□□ 0.23
PRKCH-201ENST00000332981 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-201ENST00000332981 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms