RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
SS18L1-201ENST00000331758 C9orf78Q9NZ63 289 aaPredicted RBP11.84□□□□□ -0.51
SS18L1-201ENST00000331758 ZCCHC11Q5TAX3 1644 aaKnown RBP11.83□□□□□ -0.51
SS18L1-201ENST00000331758 ACEP12821 1306 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
SS18L1-201ENST00000331758 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 MCM10Q7L590 875 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 USP35Q9P2H5 1018 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
SS18L1-201ENST00000331758 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 ZC3H6P61129 1189 aaKnown RBP11.83□□□□□ -0.52
SS18L1-201ENST00000331758 RILPL2Q969X0 211 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
SS18L1-201ENST00000331758 AAMPQ13685 434 aa11.82□□□□□ -0.52
SS18L1-201ENST00000331758 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
SS18L1-201ENST00000331758 ABCC1P33527 1531 aa11.82□□□□□ -0.52
SS18L1-201ENST00000331758 ATP10AO60312 1499 aa11.82□□□□□ -0.52
SS18L1-201ENST00000331758 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
SS18L1-201ENST00000331758 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
SS18L1-201ENST00000331758 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
SS18L1-201ENST00000331758 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
SS18L1-201ENST00000331758 NSD2O96028 1365 aa11.81□□□□□ -0.52
SS18L1-201ENST00000331758 ZNF530Q6P9A1 599 aaPredicted RBP11.81□□□□□ -0.52
SS18L1-201ENST00000331758 NEO1Q92859 1461 aa11.81□□□□□ -0.52
SS18L1-201ENST00000331758 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
SS18L1-201ENST00000331758 NOL8Q76FK4 1167 aaKnown RBP11.8□□□□□ -0.52
SS18L1-201ENST00000331758 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
SS18L1-201ENST00000331758 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
SS18L1-201ENST00000331758 NKTRP30414 1462 aaKnown RBP11.8□□□□□ -0.52
SS18L1-201ENST00000331758 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
SS18L1-201ENST00000331758 USHBP1Q8N6Y0 703 aa11.8□□□□□ -0.52
SS18L1-201ENST00000331758 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
SS18L1-201ENST00000331758 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
SS18L1-201ENST00000331758 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
SS18L1-201ENST00000331758 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
SS18L1-201ENST00000331758 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
SS18L1-201ENST00000331758 LRRIQ1Q96JM4 1722 aa11.79□□□□□ -0.52
SS18L1-201ENST00000331758 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
SS18L1-201ENST00000331758 GORABQ5T7V8 394 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 FAM83GA6ND36 823 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 PLEKHH1Q9ULM0 1364 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 GZF1Q9H116 711 aaPredicted RBP11.78□□□□□ -0.52
SS18L1-201ENST00000331758 POLKQ9UBT6 870 aa11.78□□□□□ -0.52
SS18L1-201ENST00000331758 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.52
SS18L1-201ENST00000331758 ZNF428Q96B54 188 aa11.77□□□□□ -0.52
SS18L1-201ENST00000331758 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.52
SS18L1-201ENST00000331758 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
SS18L1-201ENST00000331758 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
SS18L1-201ENST00000331758 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
SS18L1-201ENST00000331758 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
SS18L1-201ENST00000331758 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
SS18L1-201ENST00000331758 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
SS18L1-201ENST00000331758 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
SS18L1-201ENST00000331758 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
SS18L1-201ENST00000331758 ABCC11Q96J66 1382 aa11.75□□□□□ -0.53
SS18L1-201ENST00000331758 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
SS18L1-201ENST00000331758 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
SS18L1-201ENST00000331758 LRPPRCP42704 1394 aaKnown RBP11.75□□□□□ -0.53
SS18L1-201ENST00000331758 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 KCNH5Q8NCM2 988 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
SS18L1-201ENST00000331758 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 GNAI3P08754 354 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 TRIM27P14373 513 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 KCNA6P17658 529 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 AEBP1Q8IUX7 1158 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
SS18L1-201ENST00000331758 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
SS18L1-201ENST00000331758 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
SS18L1-201ENST00000331758 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
SS18L1-201ENST00000331758 GBP4Q96PP9 640 aa11.72□□□□□ -0.53
SS18L1-201ENST00000331758 ST18O60284 1047 aa11.72□□□□□ -0.53
SS18L1-201ENST00000331758 PTPRTO14522 1441 aa11.72□□□□□ -0.53
SS18L1-201ENST00000331758 DDX54Q8TDD1 881 aaKnown RBP11.72□□□□□ -0.53
SS18L1-201ENST00000331758 ZFYVE16Q7Z3T8 1539 aa11.72□□□□□ -0.53
SS18L1-201ENST00000331758 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
SS18L1-201ENST00000331758 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
SS18L1-201ENST00000331758 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.53
SS18L1-201ENST00000331758 GNAI2P04899 355 aa11.71□□□□□ -0.53
SS18L1-201ENST00000331758 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.53
SS18L1-201ENST00000331758 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.53
SS18L1-201ENST00000331758 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
SS18L1-201ENST00000331758 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
SS18L1-201ENST00000331758 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
SS18L1-201ENST00000331758 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
SS18L1-201ENST00000331758 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
SS18L1-201ENST00000331758 KDM5CP41229 1560 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms