RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
CCDC107-201ENST00000327351 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
CCDC107-201ENST00000327351 SBNO1A3KN83 1393 aa23.3■■□□□ 1.32
CCDC107-201ENST00000327351 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
CCDC107-201ENST00000327351 ANKRD36BQ8N2N9 1353 aa23.3■■□□□ 1.32
CCDC107-201ENST00000327351 RALBP1Q15311 655 aa23.3■■□□□ 1.32
CCDC107-201ENST00000327351 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
CCDC107-201ENST00000327351 LRP6O75581 1613 aa23.3■■□□□ 1.32
CCDC107-201ENST00000327351 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
CCDC107-201ENST00000327351 CABP1Q9NZU7 370 aa23.29■■□□□ 1.32
CCDC107-201ENST00000327351 NPC1L1Q9UHC9 1359 aa23.28■■□□□ 1.32
CCDC107-201ENST00000327351 TNS3Q68CZ2 1445 aa23.28■■□□□ 1.32
CCDC107-201ENST00000327351 PLEKHG3A1L390 1219 aa23.28■■□□□ 1.32
CCDC107-201ENST00000327351 LMOD2Q6P5Q4 547 aa23.28■■□□□ 1.32
CCDC107-201ENST00000327351 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
CCDC107-201ENST00000327351 TOPAZ1Q8N9V7 1692 aa23.27■■□□□ 1.32
CCDC107-201ENST00000327351 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
CCDC107-201ENST00000327351 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
CCDC107-201ENST00000327351 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
CCDC107-201ENST00000327351 ACEP12821 1306 aa23.26■■□□□ 1.31
CCDC107-201ENST00000327351 ARHGEF10O15013 1369 aa23.26■■□□□ 1.31
CCDC107-201ENST00000327351 PARD3Q8TEW0 1356 aa23.26■■□□□ 1.31
CCDC107-201ENST00000327351 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
CCDC107-201ENST00000327351 CD163L1Q9NR16 1453 aa23.25■■□□□ 1.31
CCDC107-201ENST00000327351 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
CCDC107-201ENST00000327351 A0A1W2PP64 1363 aa23.24■■□□□ 1.31
CCDC107-201ENST00000327351 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
CCDC107-201ENST00000327351 ADAMTS2O95450 1211 aa23.23■■□□□ 1.31
CCDC107-201ENST00000327351 HAP1P54257 671 aaPredicted RBP23.23■■□□□ 1.31
CCDC107-201ENST00000327351 HDGFL2Q7Z4V5 671 aaPredicted RBP23.23■■□□□ 1.31
CCDC107-201ENST00000327351 C8orf37Q96NL8 207 aa23.21■■□□□ 1.31
CCDC107-201ENST00000327351 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
CCDC107-201ENST00000327351 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
CCDC107-201ENST00000327351 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
CCDC107-201ENST00000327351 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
CCDC107-201ENST00000327351 RGS17Q9UGC6 210 aaPredicted RBP23.19■■□□□ 1.3
CCDC107-201ENST00000327351 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
CCDC107-201ENST00000327351 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
CCDC107-201ENST00000327351 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
CCDC107-201ENST00000327351 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
CCDC107-201ENST00000327351 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
CCDC107-201ENST00000327351 AFF2P51816 1311 aa23.16■■□□□ 1.3
CCDC107-201ENST00000327351 ILDR2Q71H61 639 aa23.15■■□□□ 1.3
CCDC107-201ENST00000327351 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
CCDC107-201ENST00000327351 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
CCDC107-201ENST00000327351 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
CCDC107-201ENST00000327351 MRS2Q9HD23 443 aa23.14■■□□□ 1.29
CCDC107-201ENST00000327351 NSD2O96028 1365 aa23.13■■□□□ 1.29
CCDC107-201ENST00000327351 POTEAQ6S8J7 498 aa23.12■■□□□ 1.29
CCDC107-201ENST00000327351 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
CCDC107-201ENST00000327351 ABTB2Q8N961 1025 aa23.12■■□□□ 1.29
CCDC107-201ENST00000327351 USP6P35125 1406 aa23.11■■□□□ 1.29
CCDC107-201ENST00000327351 PPP2R1AP30153 589 aa23.11■■□□□ 1.29
CCDC107-201ENST00000327351 AKAP12Q02952 1782 aa23.11■■□□□ 1.29
CCDC107-201ENST00000327351 FYB1O15117 783 aa23.1■■□□□ 1.29
CCDC107-201ENST00000327351 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
CCDC107-201ENST00000327351 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
CCDC107-201ENST00000327351 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
CCDC107-201ENST00000327351 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.29
CCDC107-201ENST00000327351 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.29
CCDC107-201ENST00000327351 USP21Q9UK80 565 aa23.08■■□□□ 1.29
CCDC107-201ENST00000327351 FNBP4Q8N3X1 1017 aaPredicted RBP23.07■■□□□ 1.28
CCDC107-201ENST00000327351 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
CCDC107-201ENST00000327351 ABCA3Q99758 1704 aa23.06■■□□□ 1.28
CCDC107-201ENST00000327351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC107-201ENST00000327351 GGNBP2Q9H3C7 697 aa23.05■■□□□ 1.28
CCDC107-201ENST00000327351 QTRT2Q9H974 415 aaKnown RBP23.05■■□□□ 1.28
CCDC107-201ENST00000327351 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
CCDC107-201ENST00000327351 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
CCDC107-201ENST00000327351 RXRBP28702 533 aa23.03■■□□□ 1.28
CCDC107-201ENST00000327351 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
CCDC107-201ENST00000327351 SSH2Q76I76 1423 aa23.02■■□□□ 1.28
CCDC107-201ENST00000327351 NLRP6P59044 892 aa23.02■■□□□ 1.28
CCDC107-201ENST00000327351 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
CCDC107-201ENST00000327351 KIF20BQ96Q89 1820 aa23.02■■□□□ 1.28
CCDC107-201ENST00000327351 ANKRD26Q9UPS8 1709 aa23.01■■□□□ 1.27
CCDC107-201ENST00000327351 NME9Q86XW9 330 aa23■■□□□ 1.27
CCDC107-201ENST00000327351 USP19O94966 1318 aa23■■□□□ 1.27
CCDC107-201ENST00000327351 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 NRKQ7Z2Y5 1582 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 RBM6P78332 1123 aaKnown RBP22.99■■□□□ 1.27
CCDC107-201ENST00000327351 UNC5CLQ8IV45 518 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 PRDM11Q9NQV5 511 aa22.99■■□□□ 1.27
CCDC107-201ENST00000327351 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
CCDC107-201ENST00000327351 SLIT2O94813 1529 aa22.98■■□□□ 1.27
CCDC107-201ENST00000327351 TNNT2P45379 298 aaPredicted RBP22.98■■□□□ 1.27
CCDC107-201ENST00000327351 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
CCDC107-201ENST00000327351 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
CCDC107-201ENST00000327351 GCP02774 474 aa22.96■■□□□ 1.27
CCDC107-201ENST00000327351 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
CCDC107-201ENST00000327351 KIAA0232Q92628 1395 aa22.96■■□□□ 1.27
CCDC107-201ENST00000327351 ATRNO75882 1429 aa22.96■■□□□ 1.27
CCDC107-201ENST00000327351 PIK3C2AO00443 1686 aa22.96■■□□□ 1.27
CCDC107-201ENST00000327351 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
CCDC107-201ENST00000327351 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
CCDC107-201ENST00000327351 PLCH1Q4KWH8 1693 aa22.94■■□□□ 1.26
CCDC107-201ENST00000327351 SOCS7O14512 581 aa22.94■■□□□ 1.26
CCDC107-201ENST00000327351 BTG4Q9NY30 223 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms