RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 U2SURPO15042 1029 aaKnown RBP28.8■■■□□ 2.2
PNKP-201ENST00000322344 FRAT1Q92837 279 aaPredicted RBP28.8■■■□□ 2.2
PNKP-201ENST00000322344 MAPK8IP3Q9UPT6 1336 aa28.8■■■□□ 2.2
PNKP-201ENST00000322344 DIAPH1O60610 1272 aaKnown RBP28.77■■■□□ 2.2
PNKP-201ENST00000322344 TMPOP42166 694 aaKnown RBP28.77■■■□□ 2.2
PNKP-201ENST00000322344 IL16Q14005 1332 aa28.77■■■□□ 2.2
PNKP-201ENST00000322344 C8orf34Q49A92 452 aa28.77■■■□□ 2.2
PNKP-201ENST00000322344 CDC42BPGQ6DT37 1551 aa28.76■■■□□ 2.19
PNKP-201ENST00000322344 IGHDP01880 384 aa28.76■■■□□ 2.19
PNKP-201ENST00000322344 PMFBP1Q8TBY8 1022 aa28.76■■■□□ 2.19
PNKP-201ENST00000322344 RGS3P49796 1198 aa28.74■■■□□ 2.19
PNKP-201ENST00000322344 MLECQ14165 292 aa28.73■■■□□ 2.19
PNKP-201ENST00000322344 WAPLQ7Z5K2 1190 aa28.72■■■□□ 2.19
PNKP-201ENST00000322344 NRXN3Q9Y4C0 1643 aa28.72■■■□□ 2.19
PNKP-201ENST00000322344 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
PNKP-201ENST00000322344 TRIM35Q9UPQ4 493 aa28.72■■■□□ 2.19
PNKP-201ENST00000322344 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
PNKP-201ENST00000322344 NBR1Q14596 966 aa28.7■■■□□ 2.19
PNKP-201ENST00000322344 SIRT1Q96EB6 747 aa28.7■■■□□ 2.19
PNKP-201ENST00000322344 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
PNKP-201ENST00000322344 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
PNKP-201ENST00000322344 FCHSD2O94868 740 aa28.68■■■□□ 2.18
PNKP-201ENST00000322344 ZKSCAN2Q63HK3 967 aa28.68■■■□□ 2.18
PNKP-201ENST00000322344 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
PNKP-201ENST00000322344 EDC4Q6P2E9 1401 aaKnown RBP28.67■■■□□ 2.18
PNKP-201ENST00000322344 WASLO00401 505 aaPredicted RBP28.67■■■□□ 2.18
PNKP-201ENST00000322344 RLBP1P12271 317 aa28.67■■■□□ 2.18
PNKP-201ENST00000322344 CPSF1Q10570 1443 aaKnown RBP28.67■■■□□ 2.18
PNKP-201ENST00000322344 BCL2L13Q9BXK5 485 aa28.66■■■□□ 2.18
PNKP-201ENST00000322344 TECPR2O15040 1411 aa28.66■■■□□ 2.18
PNKP-201ENST00000322344 RTL5Q5HYW3 569 aaPredicted RBP28.65■■■□□ 2.18
PNKP-201ENST00000322344 RIPK4P57078 832 aa28.65■■■□□ 2.18
PNKP-201ENST00000322344 EXOSC9Q06265 439 aaKnown RBP28.64■■■□□ 2.18
PNKP-201ENST00000322344 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.18
PNKP-201ENST00000322344 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.18
PNKP-201ENST00000322344 METP08581 1390 aa28.64■■■□□ 2.17
PNKP-201ENST00000322344 MVPQ14764 893 aaKnown RBP28.64■■■□□ 2.17
PNKP-201ENST00000322344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.64■■■□□ 2.17
PNKP-201ENST00000322344 PPIP5K1Q6PFW1 1433 aa28.64■■■□□ 2.17
PNKP-201ENST00000322344 POLKQ9UBT6 870 aa28.63■■■□□ 2.17
PNKP-201ENST00000322344 DZIP1LQ8IYY4 767 aaKnown RBP28.62■■■□□ 2.17
PNKP-201ENST00000322344 PPM1GO15355 546 aaPredicted RBP28.62■■■□□ 2.17
PNKP-201ENST00000322344 NEFMP07197 916 aa28.62■■■□□ 2.17
PNKP-201ENST00000322344 RWDD1Q9H446 243 aaPredicted RBP28.62■■■□□ 2.17
PNKP-201ENST00000322344 TNNQ9UQP3 1299 aa28.62■■■□□ 2.17
PNKP-201ENST00000322344 TNRQ92752 1358 aa28.61■■■□□ 2.17
PNKP-201ENST00000322344 LRRC7Q96NW7 1537 aa28.61■■■□□ 2.17
PNKP-201ENST00000322344 CPS1P31327 1500 aa28.61■■■□□ 2.17
PNKP-201ENST00000322344 FTSJ3Q8IY81 847 aaKnown RBP28.6■■■□□ 2.17
PNKP-201ENST00000322344 SMC4Q9NTJ3 1288 aa28.6■■■□□ 2.17
PNKP-201ENST00000322344 PCDHB15Q9Y5E8 787 aa28.6■■■□□ 2.17
PNKP-201ENST00000322344 VIRMAQ69YN4 1812 aaKnown RBP28.6■■■□□ 2.17
PNKP-201ENST00000322344 RSPH6AQ9H0K4 717 aa28.59■■■□□ 2.17
PNKP-201ENST00000322344 AATKQ6ZMQ8 1374 aa28.58■■■□□ 2.17
PNKP-201ENST00000322344 CDK12Q9NYV4 1490 aaPredicted RBP28.57■■■□□ 2.16
PNKP-201ENST00000322344 TXNDC2Q86VQ3 553 aa28.56■■■□□ 2.16
PNKP-201ENST00000322344 NUDT16Q96DE0 195 aaKnown RBP28.56■■■□□ 2.16
PNKP-201ENST00000322344 USP35Q9P2H5 1018 aa28.56■■■□□ 2.16
PNKP-201ENST00000322344 SSH1Q8WYL5 1049 aa28.55■■■□□ 2.16
PNKP-201ENST00000322344 DAXXQ9UER7 740 aaPredicted RBP28.55■■■□□ 2.16
PNKP-201ENST00000322344 CCDC61Q9Y6R9 512 aa28.55■■■□□ 2.16
PNKP-201ENST00000322344 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
PNKP-201ENST00000322344 TMEM2Q9UHN6 1383 aa28.54■■■□□ 2.16
PNKP-201ENST00000322344 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
PNKP-201ENST00000322344 DEKP35659 375 aaKnown RBP28.53■■■□□ 2.16
PNKP-201ENST00000322344 ATF7IPQ6VMQ6 1270 aa28.53■■■□□ 2.16
PNKP-201ENST00000322344 CALD1Q05682 793 aaKnown RBP28.53■■■□□ 2.16
PNKP-201ENST00000322344 ALDH1L2Q3SY69 923 aa28.53■■■□□ 2.16
PNKP-201ENST00000322344 ZNF428Q96B54 188 aa28.53■■■□□ 2.16
PNKP-201ENST00000322344 DDX19BQ9UMR2 479 aa28.53■■■□□ 2.16
PNKP-201ENST00000322344 KIF16BQ96L93 1317 aa28.52■■■□□ 2.16
PNKP-201ENST00000322344 UBR1Q8IWV7 1749 aa28.52■■■□□ 2.16
PNKP-201ENST00000322344 MAP2P11137 1827 aaKnown RBP28.52■■■□□ 2.16
PNKP-201ENST00000322344 TRIM27P14373 513 aa28.52■■■□□ 2.16
PNKP-201ENST00000322344 IPO8O15397 1037 aaKnown RBP28.51■■■□□ 2.15
PNKP-201ENST00000322344 NFE2L2Q16236 605 aa28.51■■■□□ 2.15
PNKP-201ENST00000322344 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
PNKP-201ENST00000322344 NME9Q86XW9 330 aa28.5■■■□□ 2.15
PNKP-201ENST00000322344 COG3Q96JB2 828 aa28.5■■■□□ 2.15
PNKP-201ENST00000322344 PDZRN3Q9UPQ7 1066 aa28.5■■■□□ 2.15
PNKP-201ENST00000322344 LAS1LQ9Y4W2 734 aaKnown RBP28.5■■■□□ 2.15
PNKP-201ENST00000322344 IL13P35225 146 aa28.49■■■□□ 2.15
PNKP-201ENST00000322344 AKAP12Q02952 1782 aa28.49■■■□□ 2.15
PNKP-201ENST00000322344 EMILIN1Q9Y6C2 1016 aa28.48■■■□□ 2.15
PNKP-201ENST00000322344 NOB1Q9ULX3 412 aaKnown RBP28.47■■■□□ 2.15
PNKP-201ENST00000322344 ITSN1Q15811 1721 aa28.47■■■□□ 2.15
PNKP-201ENST00000322344 C3P01024 1663 aa28.46■■■□□ 2.15
PNKP-201ENST00000322344 FBLN1P23142 703 aa28.46■■■□□ 2.15
PNKP-201ENST00000322344 BRPF1P55201 1214 aaPredicted RBP28.46■■■□□ 2.15
PNKP-201ENST00000322344 HDAC1Q13547 482 aaPredicted RBP28.46■■■□□ 2.15
PNKP-201ENST00000322344 ADAMTS13Q76LX8 1427 aa28.44■■■□□ 2.14
PNKP-201ENST00000322344 ITPRIPQ8IWB1 547 aa28.44■■■□□ 2.14
PNKP-201ENST00000322344 PLEKHG1Q9ULL1 1385 aa28.43■■■□□ 2.14
PNKP-201ENST00000322344 LMOD3Q0VAK6 560 aa28.43■■■□□ 2.14
PNKP-201ENST00000322344 HMOX1P09601 288 aa28.42■■■□□ 2.14
PNKP-201ENST00000322344 PHACTR3Q96KR7 559 aa28.42■■■□□ 2.14
PNKP-201ENST00000322344 ROBO2Q9HCK4 1378 aa28.42■■■□□ 2.14
PNKP-201ENST00000322344 USP19O94966 1318 aa28.42■■■□□ 2.14
PNKP-201ENST00000322344 GNAI1P63096 354 aa28.42■■■□□ 2.14
PNKP-201ENST00000322344 IFT57Q9NWB7 429 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms