RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
TOP3A-201ENST00000321105 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
TOP3A-201ENST00000321105 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
TOP3A-201ENST00000321105 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
TOP3A-201ENST00000321105 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
TOP3A-201ENST00000321105 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 ACEP12821 1306 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 TRIM27P14373 513 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-201ENST00000321105 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 RLBP1P12271 317 aa13.65□□□□□ -0.22
TOP3A-201ENST00000321105 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
TOP3A-201ENST00000321105 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
TOP3A-201ENST00000321105 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
TOP3A-201ENST00000321105 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
TOP3A-201ENST00000321105 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-201ENST00000321105 POLKQ9UBT6 870 aa13.63□□□□□ -0.23
TOP3A-201ENST00000321105 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
TOP3A-201ENST00000321105 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
TOP3A-201ENST00000321105 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
TOP3A-201ENST00000321105 ANXA1P04083 346 aa13.62□□□□□ -0.23
TOP3A-201ENST00000321105 ANO2Q9NQ90 1003 aa13.62□□□□□ -0.23
TOP3A-201ENST00000321105 MCCP23508 829 aa13.62□□□□□ -0.23
TOP3A-201ENST00000321105 GORABQ5T7V8 394 aa13.61□□□□□ -0.23
TOP3A-201ENST00000321105 ABCA8O94911 1581 aa13.61□□□□□ -0.23
TOP3A-201ENST00000321105 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-201ENST00000321105 YEATS2Q9ULM3 1422 aa13.61□□□□□ -0.23
TOP3A-201ENST00000321105 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
TOP3A-201ENST00000321105 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
TOP3A-201ENST00000321105 SMARCA5O60264 1052 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-201ENST00000321105 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
TOP3A-201ENST00000321105 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 MAP4K4O95819 1239 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-201ENST00000321105 IL1RAPL2Q9NP60 686 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 PLA2R1Q13018 1463 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 MYL6BP14649 208 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 A0A1W2PP64 1363 aa13.6□□□□□ -0.23
TOP3A-201ENST00000321105 GAS2L2Q8NHY3 880 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-201ENST00000321105 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
TOP3A-201ENST00000321105 NKTRP30414 1462 aaKnown RBP13.59□□□□□ -0.23
TOP3A-201ENST00000321105 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
TOP3A-201ENST00000321105 PTMAP06454 111 aaKnown RBP13.58□□□□□ -0.24
TOP3A-201ENST00000321105 NPATQ14207 1427 aa13.58□□□□□ -0.24
TOP3A-201ENST00000321105 SIL1Q9H173 461 aa13.57□□□□□ -0.24
TOP3A-201ENST00000321105 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
TOP3A-201ENST00000321105 C8orf58Q8NAV2 365 aa13.57□□□□□ -0.24
TOP3A-201ENST00000321105 COL17A1Q9UMD9 1497 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-201ENST00000321105 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
TOP3A-201ENST00000321105 KCNA6P17658 529 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
TOP3A-201ENST00000321105 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
TOP3A-201ENST00000321105 TNRQ92752 1358 aa13.55□□□□□ -0.24
TOP3A-201ENST00000321105 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
TOP3A-201ENST00000321105 HSPA2P54652 639 aa13.55□□□□□ -0.24
TOP3A-201ENST00000321105 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
TOP3A-201ENST00000321105 CABLES1Q8TDN4 633 aa13.54□□□□□ -0.24
TOP3A-201ENST00000321105 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-201ENST00000321105 RIMS2Q9UQ26 1411 aa13.54□□□□□ -0.24
TOP3A-201ENST00000321105 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
TOP3A-201ENST00000321105 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
TOP3A-201ENST00000321105 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
TOP3A-201ENST00000321105 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-201ENST00000321105 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
TOP3A-201ENST00000321105 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
TOP3A-201ENST00000321105 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 LTKP29376 864 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-201ENST00000321105 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 GOLGA6L4A6NEF3 574 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 ST18O60284 1047 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
TOP3A-201ENST00000321105 ATP10AO60312 1499 aa13.53□□□□□ -0.24
TOP3A-201ENST00000321105 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.24
TOP3A-201ENST00000321105 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.24
TOP3A-201ENST00000321105 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-201ENST00000321105 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
TOP3A-201ENST00000321105 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
TOP3A-201ENST00000321105 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
TOP3A-201ENST00000321105 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
TOP3A-201ENST00000321105 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-201ENST00000321105 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-201ENST00000321105 GSE1Q14687 1217 aa13.52□□□□□ -0.25
TOP3A-201ENST00000321105 GNAI2P04899 355 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms